Nocardia farcinica IFM 10152: NFA_28020
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Entry
NFA_28020 CDS
T00207
Name
(GenBank) putative ABC transporter
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NFA_28020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfa02000
]
NFA_28020
Transporters [BR:
nfa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NFA_28020
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_16
AAA_29
ATP-synt_ab
AAA_22
RsgA_GTPase
AAA_24
AAA_33
AAA_28
AAA
AAA_18
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BAD57649
NIH_Japan:
nfa28020
UniProt:
Q5YVZ2
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All DBs
Position
2991140..2992852
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AA seq
570 aa
AA seq
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MIRTLLRVLGPDYAPPVRRTIALMTLTAVAEGLSYALVVPVLRALLGDNPAEAEPWLIAF
GAAVAGYALLRYRSDLSGFTVGTTLLRGVYHRLGDHLARLPVGWYTPGRVGEVSVLAGRG
VLAALSVLAHLLAPLVSATVTPLTILAVMLAYEWRLGLAALVAVPIVAATQAVTARAATA
GDAERHERDTEAANRVVEYLQAQPVLRAGGRTAERFALLDDALRAVERTSRKQIATALTG
AVGATLTVQAMFTALLALAAYLALGGTVDVAEVLAILVLAARCADPLLALADIGSQVRGA
RAELRRLDAVLRTEPLPEPAEPIRPQRHDLAFDAVTFAHGDRPVLDGVTLTVPEGQRLAV
VGPSGAGKSTLLHLLARFSDVDAGAVRIGGVDVRAIDTDTLMSRIAVVFQDVHLFDGTIE
DNVRLGRPDATDAAVRAAAAAARLDEVIERLPDGWASHVGEGGALLSGGERQRVSIARAL
LKDAPIVLLDEVTSALDPVNEAAVHAGITRLMAGRTVVMVAHRLRTVRTADRIVFLDGGH
VVEAGTHDELLARGGRYADFWRAAAGPAHT
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcacgctgttgcgcgtactcggccccgactacgcgcccccggtgcgccgcacc
atcgccctgatgaccctcaccgccgtggccgagggcctgtcctacgccctggtggtgccg
gtgctgcgggcgctgctcggcgacaacccggccgaggccgagccctggctgatcgcgttc
ggggccgccgtggcggggtacgcgctgctgcgttaccgcagcgacctgtccggtttcacc
gtcggcaccaccctgttgcgcggggtctaccaccggctcggcgatcatctggcccggttg
ccggtcggctggtacaccccagggcgggtaggggaggtgtcggtgctggccgggcgcggt
gtcctcgccgcgctgagcgtgctggcccacctgctggccccgctggtctcggcgaccgtc
acgcccctgaccatcctcgccgtcatgctcgcctacgagtggcggctcgggctggcggcg
ctggtcgcggtgccgatcgtcgccgccacccaggccgtcaccgcgcgggccgccaccgcg
ggcgacgccgaacgccacgagcgcgacaccgaggccgcgaaccgcgtcgtcgagtatctg
caggcgcagccggtcctgcgcgcgggcgggcgaaccgccgagcgcttcgccctgctcgac
gacgccctgcgcgctgtcgaacgcacctctcgcaagcagatcgcgaccgcgctgaccggc
gcggtcggcgcgaccctcaccgtgcaggcgatgttcaccgcactgctggcgctggccgcc
tacctcgccctgggcggcacggtcgacgtggccgaggtcctggcgattctggtgttggct
gcccgctgcgccgatccgctgctcgcgctggccgacatcggcagtcaggtgcgcggcgcc
cgcgccgaactgcgtcgactcgacgcggtcctgcgcaccgaaccgctgccggaacccgcc
gaaccgatccggccgcagcggcacgacctcgccttcgacgccgtgaccttcgcccacggc
gatcggcccgtgctcgacggggtcaccctgaccgtgccggaagggcaacggctcgccgtc
gtcggcccgtcgggtgcgggcaagagcaccctgctgcacctgctcgcgcgcttctccgac
gtcgacgcgggcgcggtgcgcatcggcggggtggacgtgcgcgccatcgacaccgacacg
ctcatgtcgcggatcgcggtggtcttccaggacgtgcacctcttcgacggcaccatcgag
gacaacgtccgcctcggccggcccgacgccaccgacgccgcggtcagggcagcggcggcg
gccgcccgcctggacgaggtgatcgagcggctgcccgacggctgggcgagccacgtcggc
gagggcggggccctgctgtccggcggtgagcggcaacgggtctcgatcgcccgggcgctg
ctgaaggacgccccgatcgtgctgctcgacgaggtgacctcggccctggacccggtgaac
gaggccgccgtgcacgcgggcatcacccggctgatggccgggcgcacggtcgtcatggtg
gcgcaccggctgcgcacggtccgcaccgccgaccgcatcgtcttcctcgacggcgggcac
gtcgtcgaggcgggcacccacgacgagttgctcgcccgcggcggtcggtacgccgacttc
tggcgcgcggcagccggtccggcgcacacgtga
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