Nocardia farcinica IFM 10152: NFA_33620
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Entry
NFA_33620 CDS
T00207
Name
(GenBank) putative ABC transporter ATP-binding protein
Organism
nfa
Nocardia farcinica IFM 10152
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
SMC_N
AAA_23
AAA_29
AAA_16
AAA_22
AAA_30
AAA_15
Phage_holin_Dp1
Motif
Other DBs
NCBI-ProteinID:
BAD58209
NIH_Japan:
nfa33620
UniProt:
Q5YUD2
LinkDB
All DBs
Position
complement(3561637..3564417)
Genome browser
AA seq
926 aa
AA seq
DB search
MTDHLSFLVLGLGNGAVYAALGLALVMTFKSSGVVNFATGAVALYAAYTYALLRKGELMV
PIPGLPETIELGGPLGVAPAMAISLVAAAVLGVLCYALVFRPMRTASVIAKAVASIGLMI
VIQAVIAQRAGTGLISVPPIFALDMFALGDRTVPADRVWLAASVVALSAVAALGFRFTRF
GVATEAAAESEKGTYLTGLSPDRIAFANWTLSSMVAGLGGILIAPLVALNPVAYSLFIVP
ALAATLVGNFGSIWLTVTAGVVIGALQAEATNLQGLYDWWPRAGTAEAISLLLILGFLVV
KGRPLPDRGSVLRRTLGRAPRPDRVLAPAAVALAVAVVALLATSGSYRAALVSSIIFAVL
ALSQVVVTGYAGQVSLAQLTLAGVAAYALSVSNQHLGIPFPFAPVVAALFATVVGVVVGL
PALRVRGLPLTVVTLALAVFVEAFWFRNPSLNGGVQGAPIDAPRLFGIDLGIGTGEAYPR
LAFGLLCLVVLTAVGLAVAWLRRSSLGTDMLAVRANERSAAAAGIDVSRTKLVTFAIGAF
LAGLAGGLLGYQQTLATPEPFTVFLGISLFAVVYVAGITSITGGILAGVMAPGGIVYLLV
DRFLHVGDYYSVISGILLVVTVMANPDGIASKLPRIGWPALRRSAATDDIAAELPPATGA
VGDGGEPVLAVRGITVGYGAVRAATDVGFDVRPGEIVGLIGPNGAGKTTVIDAITGFAAA
TGSVALAGDELSGRPPHARSRAGLGRSFQDVELYDDLTVAENVRVGAARSRSAEPVAARV
ARTLAVLGIADLADREAGLLSQGQRQLVSMARVLAADPAVALLDEPAAGLDSAESRRLGE
KLRAVAARGTGILLVDHDMELVLSVCDRVIVLDLGAVIATGTPAQIRAHPEVLRAYLGVP
ADTVDLDHEAVPELHARPHATQEAPL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccatctttcgttcctcgtgctcggcctcggcaacggcgcggtgtacgcggcg
ctcgggctggcgctcgtgatgaccttcaagagttcgggcgtcgtgaacttcgcgaccggc
gcggtcgcgctgtatgccgcctacacctatgccttgctgcgcaagggcgagctgatggtt
ccgatacccgggctccccgagacgatcgagctcggtgggccgctcggggtcgccccggcc
atggcgatctccctggtcgccgccgctgtgctcggcgtgctctgctacgcgctcgtgttc
cggccgatgcgcacggcttcggtgatcgccaaggccgtcgcctcgatcggcctgatgatc
gtgatccaggccgtgatcgcccagcgcgcgggcaccgggctgatctcggtgccgccgatc
ttcgcgctggacatgttcgcgctcggcgaccgcacggtgcccgccgaccgggtctggctg
gcggcgtcggtcgtcgccctgtccgcggtcgcggcgctcggcttccgattcacccgattc
ggtgtcgccaccgaggccgcggccgaatcggagaagggcacctatctgaccggtttgtca
ccggaccggatcgccttcgccaactggacgctttcctcgatggtcgccggtctcggcggc
atcctcatcgccccgctggtggcgctgaacccggtggcgtactcgctgttcatcgtgccg
gcgttggccgcgacattggtcggcaatttcggctcgatctggctcaccgtgaccgccggt
gtcgtcatcggcgcgttgcaggccgaggcgaccaacctgcaggggctctacgactggtgg
cccagggccggaacggcggaggcgatctcgctcctgctgatcttgggcttcctggtcgtc
aagggtcgcccgttgcccgaccgcgggtcggtgctgcgccgaaccttgggccgggcgccg
cggccggaccgcgtgctggctcccgctgcggtggcgctcgccgtcgcggtcgtcgcgctg
ctggcgacctcgggcagttatcgggccgccctcgtcagcagcatcatcttcgcggtactc
gcgctgtcccaagtggtcgtcaccggatacgcgggtcaggtgtcactggcccagctgacg
ctggccggggtcgccgcctatgcgctgagcgtgtcgaatcagcacctcggcatcccgttc
ccgttcgcgccggtggtcgccgcgctcttcgcgacggtcgtcggcgtcgtggtcggcctg
ccggcgctgcgggtgcgcgggttgccgctgacggtggtgacgcttgcgctcgcggtgttc
gtcgaggctttctggttccgtaacccctcgctcaacggcggggtgcagggcgcacccatc
gacgccccgcggctgttcgggatcgatctcggcatcggcacgggcgaggcctacccgcga
ctggcgttcggtctgctgtgcctggtcgtcctcaccgctgtcgggctcgcggtggcgtgg
ctgcgccgcagcagcctcggcaccgacatgctcgcggtgcgggccaacgagcggtcggcg
gccgccgcgggcatcgatgtctcgcgcaccaagctggtcacgttcgccatcggagccttc
ctcgccggactcgccggtggcctgctcggttaccagcagaccctcgcgacgccggaaccg
ttcacggtgttcctcgggatctcgctgttcgcggtcgtctacgtcgcgggcatcacctcg
attaccggtggcatcctggccggcgtgatggcgcccggcggcatcgtgtatctgctggtc
gatcggttcctgcacgtcggcgactactactcggtgatcagcggcatcctgctcgtggtc
accgtcatggcgaacccggacgggatcgccagcaaactgccgaggatcggatggcccgcg
ctgaggcgcagtgccgcgaccgacgacatcgcagcggagcttccgcccgcgacaggagcg
gtaggcgacggtggcgagcccgttctcgcggtgcgcggcatcaccgtcggctacggtgcg
gtgcgggcggccaccgacgtcggattcgacgtgcgtcccggcgagatcgtcgggctcatc
ggccccaacggtgcaggcaagaccacggtcatcgacgcgatcacggggttcgccgcggcg
accggatccgtcgccctggccggcgacgagctgagcgggcggccaccgcacgcgcgcagc
cgggccgggctcggccgcagtttccaggatgtggagctgtacgacgatctcaccgtcgcc
gagaacgtccgggtcggggcggcgcggtcgcgctctgctgagccggtggcggcgcgcgtc
gcgcgcacgctcgcggtcctcgggatcgccgatctcgcggatcgggaggccgggctgctg
tcgcaggggcagcgtcagctggtgtcgatggcccgcgtgctggccgccgaccccgcggtc
gccctgctcgacgaaccggcggcgggtctcgacagcgccgaaagtcgtcggctgggtgag
aaactgcgcgccgtggcagcgcgcggcacgggcattctgctggtcgatcacgatatggag
ctggtgctctcggtgtgcgatcgggtcatcgtgctcgacctcggcgccgtcatcgcgacc
gggacgcccgcgcagatccgcgcccatcccgaggtgctgcgcgcctacctcggcgtgccc
gccgacaccgtcgacctcgatcacgaagcggttccggagctgcacgcccgaccgcatgcc
acgcaggaggccccgctgtga
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