Nocardia farcinica IFM 10152: NFA_52520
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Entry
NFA_52520 CDS
T00207
Name
(GenBank) putative ATP-dependent DNA ligase
Organism
nfa
Nocardia farcinica IFM 10152
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
BAD60104
NIH_Japan:
nfa52520
UniProt:
Q5YNY7
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Position
complement(5549367..5550938)
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AA seq
523 aa
AA seq
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MLFADVVRTSEAVRATRSRKTKVAALAELLRAAESAELAPVVAWLSGELRQGRIGTGWRT
LTGVRVPPALDAALEVATVDAIFDELAAVSGAGSGNRRKELLTRLWSAATEPEQEFLLRL
LTGELRQGALTALVAEAVAAAADVPVEQVRRAYMLSGQLPVTAEAALRGGAAALAEFRLE
VGRPIQPMLAAPGASLEEAMTEFGGEVSVEHKLDGARIQVHRDGDRIAVFTRTLRDITAG
VPELVELVARLDCTSVVLDGETLALTDAGRPRPFQETMSRFATADPARAAEVDLPPGTPV
VPPVSSTRELLLHPYFFDCLHLDGRDLLDAPLSERRAALLAVVGEHAIPALIRPEPEAAA
EYFDGALAAGHEGLMVKSLSAPYAAGRRGRSWQKIKPTHTLDLLVLGAEWGYGRRTGYLS
NLHLGARDPRTGEPVMVGKTFKGLTDALLAWQTAEFPRHERARDEHTVYLWPELVVEIAL
DGVQVSPRYPGGVALRFARVVRYRPDKTPDQADTIDTVRGLLP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtgctgttcgctgacgtggtgcggacctcggaggcggtgcgggccaccaggtcgaggaag
acgaaggtcgcggcgctggcggagctgctgcgcgcggcggagtccgcggagctggccccg
gtggtcgcgtggctgtccggtgagttgcggcagggccgcatcggcaccggctggcgcacg
ctcaccggggtgcgcgtgccaccggcgctggacgccgcgctggaggtcgcgacggtcgac
gcgatcttcgacgaactggccgccgtgtcgggcgccggctcggggaatcgtcgcaaggaa
ctgctgacccggctgtggtcggcggcgaccgagcccgaacaggagttcctgctgcggctg
ctcaccggggaactgcggcagggcgcgctcaccgcgttggtcgccgaggcggtcgccgcg
gccgcggacgtgccggtcgagcaggtgcgccgggcctacatgctctccgggcagctgccc
gtgacggcggaggccgccctgcgcggtggcgcggcggcgctggcggagttccggctcgag
gtgggcaggccgatccagccgatgctcgccgcgccgggcgcctcgctcgaggaggcgatg
acggagttcggcggggaggtcagcgtcgagcacaagctcgacggcgcgcgcatccaggtc
caccgcgacggcgaccggatcgccgtgttcacccgcacgctgcgcgacatcaccgcgggc
gtcccggaactggtggagctggtggcccggctcgactgcaccagcgtggtgctcgacggg
gagacgctcgcgctgaccgacgcgggccgcccgcgcccgttccaggagacgatgagccgc
ttcgccaccgccgaccccgcccgcgcggccgaggtcgacctgccgccgggcacgccggtg
gtgccgccggtgtcctcgacgcgcgaactgctgctgcacccgtacttcttcgactgcctg
cacctggacggccgcgacctgctcgacgccccgttgtccgagcgccgggccgcgctgctg
gcggtcgtgggcgaacacgccatcccggcgctcatccggcccgagcccgaggccgccgcc
gagtacttcgacggcgcgctggcggccggacacgaggggctgatggtcaagtcgctgagc
gcgccgtacgcggcgggcagacgcgggcggtcctggcagaagatcaagccgacgcacacc
ctcgacctgctcgtgctcggtgcggagtgggggtacgggcggcgcaccgggtacctgtcc
aacctgcacctgggcgcgcgcgatccgcgcaccggcgagccggtgatggtgggcaagacc
ttcaagggcctcaccgacgccctgctggcctggcagaccgcggagttcccgcgccacgag
cgggcccgtgacgagcacaccgtgtacctgtggccggagctggtggtggagatcgcgctg
gacggtgtgcaggtgagcccgcggtaccccggcggcgtcgcgctgcggttcgcgcgggtg
gtgcgctatcggcccgacaagacgcccgaccaggccgacaccatcgataccgtgcgcggc
ctgctgccctga
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