Neodiprion fabricii: 124183812
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Entry
124183812 CDS
T08986
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nfb
Neodiprion fabricii
Pathway
nfb03022
Basal transcription factors
nfb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124183812
09124 Replication and repair
03420 Nucleotide excision repair
124183812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfb03021
]
124183812
03400 DNA repair and recombination proteins [BR:
nfb03400
]
124183812
Transcription machinery [BR:
nfb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124183812
DNA repair and recombination proteins [BR:
nfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124183812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
124183812
NCBI-ProteinID:
XP_046428812
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Position
5:25367419..25370925
Genome browser
AA seq
467 aa
AA seq
DB search
MSNTISGKNLLRPTGLQCKDLHEYLKTRPPETLNKLYHNPPICLAVFRELPEIARHYVMR
LLFVEQPVPQAVIASWCSKLHTDEHQKVVKILNELNIWKEASIPGGLPGWILNSTLKKNL
KIVLLGGGKPWTMSNQLETDNKPRDVAFLDTYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEEDGSPVITQAGFQFLLLDTASQVWYFILQYLDTIEARGLDLVVCLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGQNKPL
SSDLEKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNLVVSILTRDSVRQALKS
GITAEQIVGYLHQHAHPKMIALGPPTLPPTIVDQIKLWENERNRFIFSEGVLYSQFLSQT
DFEVLRDHALTTQVLIWQSERKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacacgataagtggtaagaatttattgcgtccaactgggctgcagtgcaaagat
cttcatgaatatctaaagactcggccgccagaaacgttgaataaactgtatcacaaccct
ccgatttgtctggccgtttttcgggaattgcctgaaatagccaggcattatgttatgcgg
ttgctgttcgttgaacagcccgtacctcaggcagtcatagcttcatggtgttcaaagtta
cataccgatgagcatcagaaagtcgtcaaaattctcaatgagctgaatatctggaaggaa
gcatcaatccccggtggtctacctgggtggattttgaattcaacgttgaagaagaatttg
aaaatagttttacttggtggcggtaaaccttggacgatgtcaaatcagttagaaaccgat
aataaaccacgagacgtcgccttcctagatacgtatgccttggaaaggtgggagtgtgtt
ctccattacatggtcggatctcagcagcaagaaggaatatcggctgatgcggtaagaata
ctgctacatgctggactgatgaaacgtgacgaggaagacggcagcccagtcattacacaa
gcaggatttcagtttctactgctagatacagcgtcccaggtctggtacttcattcttcaa
tacttggacactatagaagccaggggtctggatctggtcgtttgtctaaccttcttgttt
caattgaatttctcgacattgggaaaagattacagtactgaaggtatgtcagagggacta
ttgacatttttgcagcacctcagagaatttggtctagtctatcaaagaaaacgtaaggct
ggaagattttaccctaccaggctagcactaaacattgccacaggtcaaaataagcctctg
tcaagtgacttagagaaggaaggatacatagtcgtggaaaccaattacagagtttacgct
tataccaattctaatttgcaagtcgctctgcttggtctcttttgtgaaatgctttacagg
ttcccaaacttggttgtatccattttaacaagagattcagtgaggcaagctctgaagagc
ggcattacagctgaacaaatcgttggatacctacatcagcatgcccatcctaagatgatt
gccttaggaccaccaactttgccccctaccatagtggatcaaatcaagttgtgggaaaac
gaaagaaatagatttatatttagcgagggcgttctgtatagtcagtttctttcacagact
gactttgaagttctcagagatcacgcgctcaccacccaagttctaatctggcaaagcgaa
agaaagcggactatggttgtcacaaaagcgggtcatgatgacgtcaagaagttttggaag
cgttattcgaaaggaagcagttga
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