Aspergillus fischeri: NFIA_075240
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Entry
NFIA_075240 CDS
T01070
Name
(RefSeq) DNA ligase, putative
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nfi
Aspergillus fischeri
Pathway
nfi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NFIA_075240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_075240
Enzymes [BR:
nfi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NFIA_075240
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NFIA_075240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
RNA_ligase
BRCT
LIG3_BRCT
DNA_ligase_IV
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
4586309
NCBI-ProteinID:
XP_001259492
UniProt:
A1DDY8
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MDSDEIIPDEEHPNVPVGDEESDIDEKYPNRPRNHSPTLPFHELFQTLFNPLGEIKKKPA
GAVAARRKVGPHGQSAANLNPLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRA
MYGIKEKAIGKMLVKIMKIDKNSEDGLNLLNWKLPGQAATSRMAGDFAGRCFDVISKRPM
RTDVGDMLIEEVNEKLDKLSAASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGAT
ERTFFDVWHPDAENLYSISSSLRRVCWELHDPNIRLDAEDRGISLMQCFQPQLAQFQMDS
LDRMVARMRPTEEDPVFWIEEKLDGERMQLHMDSDDSVPGGRRFRFWSRKAKEYTYLYGN
GIHDENGSLTRHLKDAFADGVQSLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFST
TGARPLLRVFDILYLNGRDLTGYTLRDRRNALQKAVRPVHRRFEIHPYEEATTKDEVEAA
LRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGRRG
GNLSSFLCGLRVDDAHASQGASASKCYSFCKVGGGFNAADYANIRHHTDGKWMEWNPKKP
PTAYIELAGRDAQYERPDMWIKPEDSVVICVKAASVSASDQFRIGLTLRFPRFKRLRMDK
DWRSALSVQEFLDLKSNAEQEHREKELNVDNSRRKRVKRTAKKPLTVAGYDMDEDVKYAG
PSGHIFDGLNFYILTDSSAPVKKTKPELEQLVKANGGIFFQTNNAAPHTICVADRRTVKA
ASLQKRGDVDIIRPSWIFDCVKQNEIDAGLPDLLLPFEPRHMFFATPGKHDEVASNVDQF
GDSYARNTTSEELSDVRFPHNVSLKQADLVKVLKQMTKKNRLDISQCPESVTKLIEHIQE
RVNSGHEMPCGLLFKSLTILFPHRNEDVSESESMIPSDAHSRLRYAINVARFAGANIAKT
SSHPSITHVVVDPESSSKEISSLRGEWSRKPGKKLPHIVTVDWVEESWKSRTLLDEERFQ
PKR
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacgagatcattcctgatgaggagcatccaaatgttcctgtcggagatgag
gagtctgacattgacgaaaaatatcccaaccggccccgtaatcattccccaaccctacct
tttcatgagcttttccagaccctcttcaaccctctgggcgaaataaaaaagaagccagcc
ggagcggttgcggctcgcaggaaagtcggtccccatgggcaatcagcggccaatctcaat
ccgctggagagacgacgcgatgtgattgagcggtttatctcgcggtggaggaaggaagtg
ggcgatgatatataccccgcctttcgactaattcttccggacaaggatcgggaccgggcc
atgtacggaatcaaggagaaggctatcggcaaaatgcttgtcaaaattatgaaaattgac
aagaactccgaggatggcttaaacctgctgaactggaagctgcctggacaagcagctacg
tccaggatggcgggcgactttgcggggcgatgtttcgatgtcatctcgaagcgaccaatg
cggactgacgtgggagacatgttgattgaggaggttaacgagaagctggacaagttatcg
gcggcgtccaaggaggagcagcagctgccgatccttgcggagttttaccggcgcatgaat
cccgaggaactcatgtggttgattcgtatcatcctccggcagatgaaggtgggagcgacg
gagcggaccttctttgatgtctggcatccggacgcggagaatctgtacagtatttcgagc
agtctccggcgtgtctgctgggagctgcacgatccgaatattcggctggacgctgaggac
agaggaatcagcctgatgcaatgcttccagccgcagctggctcagttccaaatggattcg
ttggaccgcatggtcgctcgaatgagaccgacggaggaggatcctgtcttctggatagag
gagaagctggatggcgagcgcatgcagcttcatatggattctgacgattcagtacctggc
ggcagacgattccgtttctggtcaagaaaagcgaaagaatatacatatttgtacggcaat
ggtattcatgatgaaaatgggtctttgacgaggcatctcaaggatgcttttgcagatggg
gtccagagcctgattctggatggtgaaatgatcacatgggaccccgagcaagacgctccc
gcacctttcggcacactcaagactgctgcattgtccgaacagaggaatccgttctccacg
acaggcgctcggccgctgctgcgtgtatttgacatactgtatcttaatgggcgagactta
actggctacacacttcgtgatcgtcgcaatgctttgcagaaggctgtccgccctgtccat
cgcagattcgagatacatccctacgaagaagctacaactaaagatgaggtcgaagctgcg
ctcagaaaggtggtagctgaagcttctgagggtttggtgctcaagaaccctcggtcgcct
taccgtctgaacgagagacacgatgactggatgaaggtgaagcctgagtacatgaccgag
ttcggagagtctctagatctcatcgtcatcggtgggtactatggctccggtcgtcgaggc
ggcaacctttcaagttttctctgcgggctaagagttgacgatgctcatgcctctcagggt
gcgagcgcgtcaaagtgctactccttctgcaaagttggaggtggctttaatgccgctgat
tatgcaaatatccgtcatcacaccgatggtaaatggatggagtggaacccaaagaaacct
ccaacggcgtatatcgaattggcaggtcgagatgctcaatatgagcgaccggacatgtgg
atcaagccggaagactcagtggtcatctgtgtcaaagcagcctctgtatcagctagtgac
cagtttcggattgggctgactttgcggtttccacgtttcaaaaggctgcgcatggacaaa
gattggagaagtgctctgtctgtgcaggaattcctggatctcaagtcgaacgctgagcag
gagcaccgggaaaaggaactgaacgtggacaattcccgtaggaaacgcgtaaagaggaca
gcgaagaagcctctcacggttgctggatacgacatggacgaagatgtcaagtatgctggt
ccatctgggcatatatttgacggattgaacttttatattctgacagattcgagtgcgccc
gtcaagaaaacaaagcctgagctagagcagcttgtcaaagctaacggtggcattttcttc
caaactaacaatgcagctcctcatacaatctgtgtggcggacagaagaacggtaaaagct
gcctcgttacagaagagaggcgatgtggatataatccggccgtcctggatttttgattgt
gtgaagcaaaatgagattgacgcagggctacccgacttactgctcccttttgagcctagg
cacatgttcttcgccacgccgggcaagcacgacgaagtggcatccaatgtagaccaattt
ggcgatagttacgctcgtaacactaccagcgaggagctcagtgatgtacgctttccgcat
aatgtttcattgaagcaggctgatctcgttaaggttctgaaacaaatgacgaagaagaat
cgtttggacatttcccagtgtccagagtccgtcacgaaactcattgaacacatccaagaa
agagtcaattctggacacgaaatgccatgcgggttgctcttcaagagtcttacaatactc
ttcccacatagaaatgaggatgtgtcggagtccgaaagtatgattccgtcggatgctcac
agccgcttgcgttatgctatcaatgtagcgaggtttgcaggcgcgaatatagctaagacc
tcaagccatccctcgatcacccatgtcgttgtcgatccagaaagctcgtcaaaagaaata
tcttcgctacgaggggagtggtccaggaagcctgggaagaagttaccacatatagtcact
gttgactgggtagaagagagctggaagagtcgaacgctattggatgaggagagattccag
cccaaacgatga
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integrated database retrieval system
