Aspergillus fischeri: NFIA_103640
Help
Entry
NFIA_103640 CDS
T01070
Name
(RefSeq) DNA repair protein Rad50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
nfi
Aspergillus fischeri
Pathway
nfi03440
Homologous recombination
nfi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NFIA_103640
03450 Non-homologous end-joining
NFIA_103640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfi03032
]
NFIA_103640
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_103640
DNA replication proteins [BR:
nfi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
NFIA_103640
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
NFIA_103640
BRCA1-C complex
NFIA_103640
NHEJ (non-homologous end-joining)
MRX complex
NFIA_103640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
SbcC_Walker_B
AAA_29
APG6_N
DUF4200
KNOX2
AAA_13
AAA_16
Motif
Other DBs
NCBI-GeneID:
4593729
NCBI-ProteinID:
XP_001266773
UniProt:
A1CW74
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
RFASTVAKIDKLSILGVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDL
PPNSKGGAFIHDPKLCGEKEVLAQVKLSFKSTSGAKMVATRSLQLTVKKTTRQQKTLEGQ
LLMVKDGERTAISSRVAELDQILPQYLGVSRAVLDSVIFCHQDESLWPMSEPSVLKKRFD
EIFEAMKYTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQDEIEAL
RAETHQLSQEMRRVAELADKAWKESESYARVLGTLEGKRIEAKSLQSTIDNLKRHLVELD
DPDEWLQSNLEQFESKQLQYQQQEEAQKENYMEIKDRIEQARQKLGVKQAEYGKYENDKA
NFERQVERRQRMTREIARSHNIRGFDNIQDQTDIDDFMRKIRKLLKEQNQALERVKREAQ
TELREVQSTLNEIGQRKSALQESKNAAKRQIGANDKEASNYQAKLNEIDVDEGVQAAVEA
NIEDISSRLNDAKDRARSASLDQEIQDVNSELHALEDEGTRLNAELIEATKRAGDFARLD
HLKKELKERERSLETMKAAHGERLAKYIGANWGPATLEQEFQRVLEEETRNVSNAESQRD
GVNRELEQVEFKLKTAKKTLAQRQKELNSCATEIREAINEEPEEYPDALKQRQAQLDVAR
RDAEQSAGLGDYFMRCLETAKQVKACRLCQRAFRADAEFNVFQKRLEGLVKKAQIGVEEE
DVERFEAELDAARAVSTAYDTWTRLSKTEIPDLEKEEDQYVLQRDELLDQLENHDKIVSE
KVEKKRDVEALSKTVNTIVRYESEIKTIRSQIQDLSANQQDNTATRTLEDIQEEIAGIGE
KTRALKKTLSKLTNDREQARTEMNNLELQLRDARSRLDNAKFQLERKSDLLARIEEYKNL
NNQQREAIAKADRDIEELTPELLKYQAQYDDISQRVEAREREMQQGISQLSESIRQLDLA
TEEIDSYNERGGPSQLERSRRELQTIETEISQLEAEQANITKEINKISAQLKDSENTKRQ
YSDNLTYRQATRVLAEVSAEIEDLAAQNAEVDRSRFKEESERRTREHNALAAKQASKMGE
MKSKDDQLMQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHSL
KMEEINAIIGELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKSGAEMDMRGRCS
AGQKVLASIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRARQQQANF
QLIVITHDEEFLRHMQCGDFSDYYYRVSRNEKQKSIIERQSIAEVM
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
cgatttgcttcaaccgtagcgaagatagacaagctttctatccttggtgttcgttccttc
gacaacacccgcagcgagaccatccaatttcacacgcctcttacattgatcgtcggctat
aatggctcagggaagactacaatcattgaatgcctcaaatatgctacgaccggcgatctt
ccacccaacagtaagggcggtgctttcatccatgacccaaagctctgcggagagaaagaa
gtccttgcccaagtgaaattatccttcaagagtacatctggagcgaagatggttgctaca
cggagcctacaacttacagtgaagaaaaccactagacaacagaaaaccctcgagggacag
cttctgatggtcaaggatggtgaaagaacagctatctcatcccgagtggcggagctggac
caaatcctgcctcagtatcttggcgtttcgagagctgtcctggattccgtcattttctgc
caccaggatgagagtctctggcccatgagcgaaccctcggtgctcaagaaaagatttgat
gagatcttcgaagctatgaaatatacgaaagccatcgacaatatcaaagccctccggaag
aagcagaatgaggagctggcaaaatacaaaatcatggaacagcatgccaaagaagacaaa
gaaaaagctgaccgtgcagagaaaagatccatcaagctacaggacgagattgaggccctc
cgcgctgaaacccatcagctctcccaagagatgcgccgtgttgcggaactcgccgacaaa
gcttggaaggagtctgaaagttacgctcgggttttagggactctggaaggaaagcgtatc
gaggcaaagagtttacagtcgacaattgacaatctcaaaaggcaccttgttgagcttgat
gatccggatgagtggctgcaatcgaatctagagcagtttgagtccaaacaactccaatac
caacaacaagaggaagctcaaaaggagaactacatggagatcaaggaccggattgagcaa
gcccgtcagaagttgggagtcaaacaagccgaatacggaaaatacgaaaatgacaaagcc
aacttcgagcgccaggtagaaagaagacagaggatgacaagggagattgctcgcagtcat
aacatccgaggctttgacaatatccaggatcaaaccgatattgacgacttcatgcgaaag
attcggaagctgttgaaggaacaaaatcaagcgctggagcgcgttaaacgtgaggcgcaa
actgagctacgcgaagtacagtctactctaaatgagattgggcagcgaaagtctgcattg
caggaaagtaagaatgcggccaagcgtcaaattggtgcaaatgacaaggaggcctccaat
tatcaagcaaagctcaacgaaattgacgtcgacgagggcgtccaagctgcagttgaagca
aacattgaggacatttcatctcgtctgaacgacgccaaagatcgtgctcgatcggcttct
ctggaccaagagattcaggacgtgaactcagaactccacgccctcgaggatgaaggcacc
cgcctcaatgctgaattgattgaggccacaaaacgagccggggattttgcccggttagat
catctcaagaaggaactcaaagagcgagaacgcagcttggaaactatgaaagctgcacat
ggcgaacgtcttgcaaagtacatcggtgcaaactggggcccagccactttagagcaagag
tttcagcgcgtccttgaagaggagaccagaaacgtctcaaatgccgaaagtcaacgtgac
ggcgtcaacagggagctggagcaggtcgaattcaagctcaagaccgccaagaagactctg
gctcagcgacagaaagagctcaatagctgcgccacagagattcgcgaagccatcaatgag
gaacccgaagagtatcccgatgcactcaaacaacgacaagcgcagctggatgtcgctaga
agggacgccgagcaaagcgccggactcggcgactactttatgcgttgtctggagacagcc
aagcaggtaaaagcttgtagactgtgccaacgagcgttcagggccgacgcagaattcaat
gtcttccaaaaacgactagagggcttggtgaagaaagcacagattggtgtggaggaagaa
gatgttgaaagatttgaagccgaactcgacgcagcccgtgcagtaagtacagcttacgat
acgtggactcgcctctccaaaaccgagattccggatctagagaaagaagaagaccagtat
gttctccagcgggatgagctcctggaccaactagagaatcatgacaagatcgtcagcgag
aaggttgaaaagaagagagacgttgaggctttgtcaaaaactgtcaatactatcgtgcga
tacgagagcgaaatcaagaccatccggtcccagatccaggatctgtccgccaatcagcag
gacaatactgctacacgtactctggaagacatccaagaggagattgccggcattggcgag
aagactagagctctgaagaaaaccctgtccaagctcacaaatgacagagagcaggcacga
actgaaatgaataacttggaattgcagctccgagatgctagaagcaggcttgacaatgcg
aagttccaactagagaggaagtcagacttgcttgctcgcatcgaggaatataaaaacctc
aacaaccagcaacgggaagcaatcgcaaaggctgacagagacatcgaggagctgacaccg
gagctgctgaaataccaagctcaatacgacgatatcagccagcgggtcgaggcccgagag
agggagatgcagcaaggcatatctcaactgtcggaaagcatacgccaattggatctggcg
acggaggagattgattcttacaatgaacggggcggaccgagtcagttggagcgtagtaga
cgcgagcttcaaacgatcgagactgaaattagccagcttgaagcggaacaggccaatatt
acaaaagaaatcaataagatctcggcacagctcaaagacagcgagaacacaaaacgccaa
tactccgacaacctgacatatcgccaggcgacccgagtactggcagaggtgtccgctgaa
attgaggatttagcagctcagaacgcagaggtggaccgaagccgcttcaaggaggaatca
gagcgccgaacccgcgaacacaacgcgcttgctgccaagcaagcgagcaagatgggagag
atgaagtctaaggatgatcaattgatgcagcttctggcggattggaacacggactacaaa
gacgccgcttcgaagtacaaggaagcgcacattaaggtagagactaccaaggctgctgtt
gatgatttagctcggtacggaggtgctttggacaaagccatcatgaagtaccactcgttg
aagatggaggagatcaatgcgatcatcggagagctctggcaaaagacatacagaggtacg
gacgttgacacgatcctcatccgctccgacaacgaaaatgcaaaaggaaaccggtcctac
aactaccgcgtctgcatggtcaaatcgggcgcagagatggatatgcgtggacgctgcagt
gcaggacaaaaagtactcgcgagtataatcattcgtttggccctggcagagtgtttcggc
gtcaattgcggcctgatcgcactcgatgaaccgacaaccaacctcgaccgggacaatatt
cgctctcttgctgagtccctgcacgacatcattcgggcgcgccagcagcaggcaaatttt
caacttattgtgattacccacgatgaggagttccttcggcatatgcaatgcggcgacttc
agtgattactattaccgggtctcccgcaatgagaaacagaagtcgatcatcgagagacag
tccattgcagaggtcatgtaa
DBGET
integrated database retrieval system
