Nostoc flagelliforme: COO91_07169
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Entry
COO91_07169 CDS
T05266
Name
(GenBank) DNA-binding response regulator, OmpR family, containings REC and winged-helix
Organism
nfl
Nostoc flagelliforme
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
Response_reg
CHASE3
HATPase_c
GAF_2
HisKA
GAF_3
PAS_9
Hpt
PAS_3
PAS_4
PAS
PAS_8
Orf78
HATPase_c_2
7tm_1
Motif
Other DBs
NCBI-ProteinID:
AUB41124
UniProt:
A0A2K8T098
LinkDB
All DBs
Position
complement(6685123..6689820)
Genome browser
AA seq
1565 aa
AA seq
DB search
MKAPLPYNEAQRIETLLQYKILDTPSEAAFDDITRLASYICQAPIALISLIDTNRQWFKS
KVGLDALETHRDFAFCAHAILQPDVFVVPDATDDERFATNPLVTSDPNIRFYAGVPLTNP
EGYALGTLCVIDYVPRELTPEQVEALRTLGRQVIKQLELRRNLASLVLVTKKGKQAQRVH
KQFFKKIAAGFGLASAILVLIGVVSYQNTRVSTNNRSIVKNTYKKINSLEKLQYQIKDAE
TGQSSYIFTGKQIYLKPYQAALANVDQEIAKLKNLTADQPNQQKQIATLEFLITAKFTEL
KQTIDLRQNKGLEAALQVLVKNEQQNLMDDIRKAINEMENEERGRLQQQLQAKKATSRNT
ILTLAIAICLSFIVLAVVYYLIYREVIERKRTEEALNQERNFISAVLDTASALVIVADSQ
GKIVRFNQACEQTTGYSFDEVRGRYFWNLFLLPEEVESVKAVFEQLLTGRGFLEHENYWV
MKDGSRRLIAWSNTFLKDYEGSVEYIVATGIDITDVSDELRLRKRVQQHLTAQYVATRVL
AESATISEATSQTLQGICESLAWDLGEIWMVDEQANVLRFLDMWCKASLDVQQLAALNRQ
TTLAPGIGLPGRVWASSEPVWIADIVKELSFSRFKISAEVQLHAAFGFPIRSGHKILGVI
TCFNCDIQPPDQDLIKTMNSIGEQVGQFIQRKQAEEEIQRQNLRSQLFTEIALKIRQSLQ
IEEILQITVEEVQKILQTDRVLIYQVLPDESATTVIEAVVSGLPTIKEQNISAPYFRAEY
LQQYYLQQYRQGQILGLANFDLPEVEQNHLELMQHFGVKVNLVVPILVKEELRGLLIVHQ
CDDSHHWSSFDTHLLRQIADQVGIALAQAQLLAAETRQRQELEIARRQAELASQAKSAFL
ANISHEIRTPMNAVLGMTSLVLDTPLDPEQREFIEIIRCSGDALLSLINEILDLSKLEAG
EMALETLDFDLSTCVEEVVELLAPSAHNKGLEIATLIEHNVPTQIKGDTGRLRQILMNLI
SNAIKFTSTGEVLVQAELRSLTSTTATIHFAITDTGLGISPEDQRKLFMPFTQVDASTTR
KYGGTGLGLAICKQLVTLMGGVIGVESQMGKGSKFWFEVLFTKLVEPALPKCERRLLNNR
RLLLVDNNATNYKIISHQATHWGMQVDQADSIAAALKVIQKVGEQGKYYDVVLVDIKNGM
TIEEQIKANSAIAEIPLIILTSTNQRDEMQQTLKIGFAAYLVKPIKPSRLLDAIINILET
QSKSEQGAKGSWLKATEKIQSTETSGILTSSSRKPATKSKLRILLAEDNLVNQKVALKQL
DSLGYKADVVANGKEVLQLLEKIPYDLILMDCQMPILDGLETTKEIHRWQEDTFALRRRP
VVIAMTANAMKEDEERCLNAGMDDYLTKPVFKEKLAAALEHWTGVILSKQKAIVYEQTVS
TDLGIDWEHLHRISGNDTEFELNLLQVCVEDIKPRLEIIKAAIASHDFGQIAREAHHLKG
ASTNIGATAMYLAADKLERLAYHQDLRDTTNLILELKEFVNCIEDFLIRSQVTNSTLLPI
KNDRV
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaccattaccttataacgaagcacagagaatcgagacgcttttgcagtataaa
attctcgacacgccatctgaagccgcttttgacgacatcacccgtttagcctcatatatt
tgtcaggctcctattgctttaattagcttaattgatacaaaccgtcagtggttcaagtca
aaagtcggtttagatgccctagaaacacatcgagatttcgcattctgtgcccatgctatt
ctacagcctgatgtttttgttgtgcctgatgcaacagatgacgaaaggttcgccaccaac
ccactggtaacatctgacccaaatattcgattttatgctggtgtacctctgactaatcct
gagggatacgcgctaggaactctatgtgtcattgactacgtaccgcgagaacttacacca
gaacaagtggaggcattacgaactttaggtcgtcaagtcatcaagcaactggaattacgc
cgaaatttagcaagtttggtacttgtaaccaagaaaggcaaacaggcgcagagggtacac
aagcaatttttcaaaaagattgcagcaggttttggtttagcatcggcaattttagttctg
attggcgtggtttcttatcaaaatacaagagtatctactaataatcgcagtatagtaaaa
aacacttataaaaaaatcaacagtctagaaaaactacagtaccagataaaggatgctgag
actggacaaagtagttacatcttcactggaaaacaaatttatctcaaaccttatcaagca
gcacttgctaacgttgatcaagaaattgccaagctgaagaatttaacagcagatcaacca
aatcaacaaaagcaaattgcaacacttgaatttctaataacggctaaatttactgaacta
aaacagactattgacttgcgccaaaacaaaggattagaggcggcattgcaagtactagtg
aaaaatgagcaacaaaatctcatggatgatattcgcaaggcgatcaatgagatggaaaac
gaggaaaggggacgactccaacagcagttacaagcaaaaaaagccactagtcgcaacaca
attctgacacttgcgatcgccatctgcctaagttttattgttcttgctgtagtctactac
ctcatctatcgtgaggtcattgagcgcaaaagaacagaagaagccttaaaccaagaacgc
aactttatctcagcagtcctggatacagccagcgccttagtaatagttgccgactcccaa
ggtaaaattgttcgcttcaatcaagcttgtgaacaaacaacaggttactccttcgatgag
gtgaggggtaggtatttctggaacttgttcctacttcctgaagaggtggagtcagtcaaa
gcagtttttgagcaattgctaactggtagaggcttcctagaacacgaaaactattgggta
atgaaggatggcagccgccgactgattgcctggtcgaatacctttttaaaagactatgaa
ggatcggtggaatacattgttgccactggtattgacatcaccgatgtctccgacgagctt
cgcttacgcaaacgcgtacaacagcatctaactgcacaatatgttgcaactcgcgtttta
gcagagtccgccacgattagcgaagctactagccaaactctgcaagggatctgcgagagt
ttggcatgggatttgggtgaaatttggatggtggatgagcaagcaaatgtgctgcgtttt
ctcgatatgtggtgtaaagcatcccttgatgtgcagcagttggcagcactgaatcggcaa
accacccttgcaccaggaattggactacctggccgggtttgggccagttctgaacctgtt
tggatcgctgatatcgttaaagaactcagtttctcccgcttcaaaattagcgctgaagta
caactacacgcagcttttggttttccgattcgcagtggtcacaaaatccttggtgtaatt
acctgctttaactgtgacatccaaccgcctgatcaagatttgatcaaaacgatgaattct
atcggtgagcaagtagggcaatttatccagcgtaaacaggctgaagaagaaatacaacgg
caaaacttgcgatcgcaactatttaccgaaatcgccctcaagattcgccaatctttgcaa
atcgaagaaattctccaaatcactgtcgaagaggtacaaaaaattctccagactgaccga
gttttaatctatcaggttctgccagatgagtctgcaaccaccgtcattgaagcagtagtt
tctggcttaccaacaatcaaagagcaaaacatcagcgccccctacttccgagccgaatat
ctacagcagtactatctacagcagtaccgtcaaggacagattttagggctagctaacttc
gatttgccagaagtcgaacaaaaccatctggaattgatgcaacactttggggtcaaagtc
aatttggttgtacccattcttgtcaaagaagaacttcgtggtttgctcatagttcatcag
tgtgacgattcccaccactggtctagctttgacactcatcttttgcggcaaatagccgac
caagtaggtattgccttagcccaagcccaactattagcagcagaaactcgtcagcgacaa
gaacttgaaattgcccgtcgccaagccgaattagcttctcaggctaaaagtgccttttta
gcaaatatcagtcatgaaattcgcactccgatgaatgcagtattgggcatgaccagtttg
gtattagatactcccttagacccagaacagcgagaatttattgaaataattcgttgtagt
ggagacgcccttttaagtttaatcaacgagattttggatctttccaaacttgaggctgga
gagatggctctcgaaactctagattttgacctatccacttgtgtggaagaagtggtggaa
ttattggctccctcagcccataacaagggattagaaattgccacactgattgagcataac
gtccccacccagatcaaaggagatactggtaggctgcggcaaattctcatgaacttaatt
agcaacgctatcaagtttaccagcactggcgaagtattagtacaagccgaattacgttct
cttacctctactacagccaccattcattttgccatcacagatacaggtcttggcattagc
cctgaagatcaacgcaaactctttatgccatttacccaagtggatgcttcgaccactcgc
aagtatggtggtaccggtttgggattagccatctgtaaacaactggtgactttaatggga
ggagtaattggggtagaaagtcagatggggaaaggatctaagttttggtttgaggtgctt
tttacaaagcttgttgagcctgctttgccaaaatgcgaacgcagacttttgaacaatcgc
cgcttgttattagtggataacaacgctactaattacaaaattatctcccatcaagctact
cattggggaatgcaggtagatcaagctgacagtattgctgctgccctcaaagttattcag
aaagttggtgagcaggggaaatattatgatgttgtcttggttgatataaaaaatggcatg
acaatagaagaacaaattaaagccaattctgcaattgctgaaatacctttgattatcctc
acttctactaatcaacgggatgaaatgcagcagacgctcaaaattggatttgctgcttat
ttggtcaaaccgattaagccatcacgactccttgatgccattataaatattttagaaact
cagtcgaaatcagaacaaggggctaaaggttcttggctaaaggctactgaaaaaatccag
agtacagaaacttcaggcattcttacctcctcttcgcgtaagcctgctactaaatccaag
ttaagaattctcttagctgaagataatttggtgaatcagaaagtcgccttaaagcaactc
gatagtttgggctacaaagccgatgtcgttgctaatggaaaggaagttttgcagctatta
gaaaaaattccttacgatttgattctaatggattgccaaatgccaattctcgacggttta
gaaaccacaaaagaaattcatcgttggcaagaggatacttttgctctgcgtcgtcgtcct
gtggtgattgcgatgactgctaatgcgatgaaagaagatgaagaaaggtgcctcaatgcc
ggaatggatgactatctgactaagccagtgtttaaagaaaaattggctgcggctctagag
cattggacaggtgtgatcctctcaaaacaaaaggcaattgtatatgagcagacagtttcc
actgatctaggaattgattgggaacacttgcatcggatatcgggaaatgacacagaattt
gagttaaatctattgcaagtatgcgttgaagatataaaaccccgtttagagataattaaa
gcagcgatcgcatctcatgactttgggcaaattgcgcgagaagctcatcaccttaaaggg
gctagtaccaacattggagccacagctatgtacctagcagctgacaaactagaacgattg
gcttaccatcaagaccttagagatactactaacttaattttagagttaaaagaatttgtt
aactgcattgaagattttttaatcagaagccaggtaacaaatagcaccttgttaccaatc
aaaaatgatcgcgtatga
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