Nocardia farcinica NCTC11134: ERS450000_03178
Help
Entry
ERS450000_03178 CDS
T04524
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase dacB precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00550
Peptidoglycan biosynthesis
nfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ERS450000_03178 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfr01002
]
ERS450000_03178 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nfr01011
]
ERS450000_03178 (dacB)
Enzymes [BR:
nfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ERS450000_03178 (dacB)
Peptidases and inhibitors [BR:
nfr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ERS450000_03178 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
nfr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ERS450000_03178 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CRY78915
UniProt:
A0A0H5NT15
LinkDB
All DBs
Position
1:3279794..3281098
Genome browser
AA seq
434 aa
AA seq
DB search
MTARLSIPLRRLTAALTVAAALGAAVAIPAAAAPTAPTPPTTTAPFTTPETDTCPQKNVP
PPAVDTSEVPAPGEPAPTPLPVPVPPIGGARMGECGVVVPDDAPPLPRDISATAWMVSDL
DTGEVLAAKDPHGRYRPASTIKVLLAIVALRTLDLDRVVTGTQADADVDGTRVGIGPGGR
YTNRQLMQALIMASGNDAAHAIAAQLGGDKATVARMNEVAKSLSAFDTRAATPSGLDGPG
MTTSAYDLSLLFREAMTIPLFAELIRTEQIDFPGYPKNPLIPDDTDHPGFPIGNDNQLLY
NYAGALGGKTGFTDDARQTFVAAAERDGRRLVVTLLKADVLPIRPWEQAARLLDYGFALP
AGASVGSLPGAATDATDTEPNVVLAAPPPGDDETATAAQPERRHAGARTLLIVGGLVAIA
VLLLGARRVSRPRR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcgcctctccatccccctgcgcaggctgacggcggcgctcaccgtcgcggcc
gcactcggcgcggcggtcgcgatccccgccgcggccgcgcccaccgcaccgacgccaccc
accacgacggcgccgttcaccacccccgagaccgacacctgcccgcagaagaacgtcccg
ccgcccgcggtggacacctccgaggtgcccgcccccggtgagccggcgcccaccccgctg
ccggtgccggtgccgccgatcgggggtgcgcggatgggcgaatgcggtgtggtggtgccc
gacgacgcgccgccactgccgcgcgacatctccgcgaccgcgtggatggtctccgacctg
gacaccggcgaggtgctggcggccaaggatccgcacggccggtaccgtcccgccagcacc
atcaaagtgctgctggcaatcgtggcgctgcgcacactcgacctggaccgggtggtcacc
ggcacccaggccgacgccgacgtcgacggcacccgcgtcggcatcggccccggcggccgc
tacaccaaccggcagctgatgcaagcgctgatcatggcctcgggcaacgacgccgcacac
gccatcgccgcccaactcggcggcgacaaggccaccgtcgcgcggatgaacgaggtcgcg
aagtcgttgtcggccttcgacacccgcgccgccacgccctccggactggacggaccgggc
atgaccacctcggcctacgacctctccctgctgttccgcgaggcgatgacgatcccgctg
ttcgccgaactcatccgcaccgagcagatcgatttccccggctatccgaagaacccgctg
atccccgacgacaccgaccaccccggcttcccgatcggcaacgacaaccagctgctctac
aactacgcgggcgccctcggcggcaagaccggcttcaccgacgacgcccgccagaccttc
gtcgccgccgccgagcgcgacggccgccgcctggtggtgaccctgctcaaggccgacgtg
ctgccgatccgtccgtgggagcaggccgcccggctactcgactacggcttcgcgctgccc
gcgggcgcttcggtggggtcgttgcccggcgcggcgaccgacgccaccgacaccgagccg
aacgtggtactggccgcgccgccgccgggcgacgacgagacggccaccgccgcacaaccc
gaacgcaggcacgcgggcgcccgcacgctgctgatcgtcggtggtctcgtcgcgatcgcc
gtgctgctgctcggcgcgcgccgggtcagccgtccccgccgctga
DBGET
integrated database retrieval system
