Nocardia farcinica NCTC11134: ERS450000_04067
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Entry
ERS450000_04067 CDS
T04524
Name
(GenBank) H-34
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nfr01011
]
ERS450000_04067
Enzymes [BR:
nfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ERS450000_04067
Peptidoglycan biosynthesis and degradation proteins [BR:
nfr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ERS450000_04067
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
LGFP
Motif
Other DBs
NCBI-ProteinID:
CRY80833
UniProt:
A0A0H5NZW8
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All DBs
Position
p2:complement(581579..583075)
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AA seq
498 aa
AA seq
DB search
MQRKRQLDDSDNAGLRRTRRRIRLRIRNRVGPPKVRLRPVLATGGTVLLVGGALAYTQWP
VDRAYEPLAGPGHGRGMSQVGAFDSAQEGWLAERILAHYYPGATLGTVPPTTLAVRLMDQ
DDAVLDAYADAGARVAGRTLEPGQVAHLTPLADGGANVVVTLGCDGDVLWQTSTADPWIY
PLDPNPGRPAEEHLTLCNGRAYRGSLGVATEDGAFRTVNRVDVEDYLLGVVPAEVQANWA
DKGAGEALRAQAVAARSYALAEQRYPYAQTCDTTDCQVYPGTEKEDPRTAAAVASTAGQV
LLRDGHILRSEYSAAPDGGAPADIQTFEVGPRPADLEVARPPADPRTRAAETPSAIDVEY
ERIGGANSTLGTPLGPEWGLPQNAGTYRLFTNGVIIATPTLGAQVVDFTTLMELIPGTDG
LDTLPTETVPTDTVPSETVPSETAPSESVPPGTVPPGGAPPVEALPRHPAGLPMPPLADP
VVPADVPAPVPPPGAAPA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcaagcgccagctcgacgacagcgacaacgccggcctacgccggacccggcgc
cggatccggctgcggatcaggaaccgggtcggcccaccgaaggtccggttgcgccccgtc
ctcgccaccggcggcaccgtcctgctggtcggcggcgccctggcctacacccagtggccc
gtcgaccgcgcatacgaacccctggcaggcccgggtcacggacgcggcatgagccaggtc
ggcgcgttcgacagcgcccaggagggctggctcgccgaacgcatcctcgcccactactac
ccgggggccaccctggggacggtcccgccgaccaccctcgcggtgcggttgatggatcag
gacgacgcggtgctggacgcctacgccgacgcgggcgcgcgggtggcaggccgcaccctc
gaacccggccaggtcgcgcatctgaccccgctcgccgacggcggcgccaacgtcgtggtc
accctgggctgcgacggcgacgtgctgtggcagacctcgaccgccgacccgtggatctat
cccctcgacccgaatcccggcaggccggccgaggaacacctcacgctgtgcaacggccgc
gcataccgcggctcgctcggcgtcgccaccgaggacggcgccttccggacggtgaaccgc
gtggacgtcgaggactacctgctcggcgtggtgcccgccgaggtgcaggccaactgggcc
gacaagggcgccggcgaggcattgcgcgcgcaggcggtcgccgcgcgctcctacgcgctc
gccgaacagcgctacccctacgcccagacctgcgacaccaccgactgccaggtgtatccg
ggcaccgagaaggaggacccgcgcaccgcggccgccgtcgcctcgaccgccgggcaggtg
ctgctgcgcgacgggcacatcctgcgctcggaatactccgcggcccccgacggcggcgcg
cccgccgacatccagaccttcgaggtcggcccgcgcccggccgacctggaggtggcccgt
ccgcccgccgatccgcgcacccgggccgccgagacgccgtcggcgatcgacgtcgaatac
gagcggatcggcggggcgaacagcacgctcggtaccccgctcggcccggagtgggggctg
ccgcagaacgcgggcacctaccggctgttcaccaacggcgtcatcatcgccacgccgacg
ctgggcgcgcaggtcgtcgatttcacgacactgatggaattgatcccgggcacagacgga
ttggacaccctgcccacggagaccgtgcccaccgacactgtgccctcagagaccgtgccc
tcggagacggcgccttcggagtccgtgccaccgggaaccgtgccgcccggcggggcgccg
ccggtggaggcgctgccacggcacccggccggccttcccatgccgccgctcgcggatccg
gtggtgccggcggacgtgcccgcccccgtcccgccgcccggggccgcgcccgcctga
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