Nocardia farcinica NCTC11134: ERS450000_05851
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Entry
ERS450000_05851 CDS
T04524
Name
(GenBank) Transposase and inactivated derivatives%2C TnpA family
Organism
nfr
Nocardia farcinica NCTC11134
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Gene cluster
GFIT
Motif
Pfam:
DUF4158
DDE_Tnp_Tn3
Motif
Other DBs
NCBI-ProteinID:
CRY84084
UniProt:
A0A0H5PA05
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Position
p2:2522207..2524321
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AA seq
704 aa
AA seq
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MATRVFADEELQRLREFPEISREELFRYFTLTPADLAFVAPQGRGPAVRLGLAVALCTLP
WLGFVPDKVSSAPPVAVARLADQLNVDAVQLRSYGKRAQTRTEHVRLVAQYLGWRPAGSM
ELKELDEFLLARAMEHDSPTLLFRLACEYLISARVIRPGPDTVVRRVAHARTQAQRETYD
RLAREFTPQRCKELDALLVADPSIGMSRLRWLSTGPVEASATAVKAEVEKLVFLRNLGAD
ELDMSVLPAERRRFLATVGRRLTGQALERRDPQRRYPILLTVLAQSATDVLDEVVQLFDQ
AISARLSKAERRMRDELAERGKAGEDRQGLLDDLLAIITDTQIPDEEIGGLIRGDRIGWE
RLRAAVAQAKPRLPRDHGHLAALDSSYSYLRQFTPQVLSTVRFAGGTAAIELLIGVHMLR
ELNATGTRKVPDDAPTGFVPTKWRGYLDEARKAGNTTAYRHYWELCVLLGLRDGLRSGDV
FVPGSRRYADPAAYLLTPQAWEPQRDEFCRLVGKSADPARALATATDELHDAMSELEKVL
ADGDGPVRLDEAGDLVVSPLSAEDVPAEAVALKQELTEMLPFAPIVSLLIELDKRTGYLD
CFTHAGGKQSRTPELKRNLIAVLLAYSTNLGLTRMAEASGISYDILAWTSEWYVREETLR
AANLTIIDYHQRLPLTPIFGAPAPCPPVMGSGSRPVANRSPPER
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacgcgggtattcgcggacgaggagttgcagcgcctgcgggagttcccggagatc
agtcgtgaggagttgttccggtacttcacgctgaccccggcggatctggcgttcgttgct
ccgcagggcaggggccctgcggtccgtctgggcctggcggtggcgttgtgcaccttgccg
tggctggggttcgtgccggacaaggtgtcgtcggcgccgccggtggcggtggcccggttg
gcggatcagctgaatgtcgatgcggtgcagcttcgttcgtatggcaagcgggcgcagacg
cggaccgagcatgtgcggctggtggcccagtatctggggtggcggcctgccgggtcgatg
gagttgaaggagctggatgagttccttctggcgcgggcgatggagcacgattcgccgacg
ctgttgttccggctggcgtgtgagtacctgatctcggcgcgggtgatccggccgggcccg
gacacggtggtccgccgggtcgcgcatgctcgcacgcaggcgcagcgggagacctatgac
cggttggcgcgcgagttcacgccgcagcggtgtaaggaactggatgcgttgctggtcgcc
gacccgtctatcgggatgtcgcggttgcggtggttgtcgaccggcccggtggaggcgtcg
gcgaccgcggtgaaggccgaggtcgagaagctggtgttcctgcgcaacctgggcgcggat
gagctggatatgtcggtgctgccggcggagcggcggcggttcctggcgactgtgggccga
cgcttgacgggccaagccttggaacgccgggatccgcaacgccgctacccgatcctgctc
acggtgttggctcagtcggccaccgatgtgctcgacgaggtggtgcagctgttcgatcag
gcgatctcggccaggttgagcaaagccgaacgccggatgcgcgacgagctcgccgagcgc
ggtaaggccggagaggatcggcaggggttgctcgacgacttgctggccatcatcaccgac
acgcagatccctgacgaggagatcggcggcctgatccggggcgatcggatcggatgggag
cggttgcgggccgcggtcgcgcaggccaaacctcggctgccgcgcgatcacgggcacctg
gccgctctggacagctcgtactcctatctgcggcagttcaccccgcaggtgctgtcgaca
gtccggttcgccggcggcaccgcggcgatcgagctgctgatcggggtgcacatgctgcgg
gagctgaatgcgaccggtacccgcaaggtgcccgacgacgcgccgacggggttcgtgccg
acgaagtggcgcggctacctcgacgaggcccgcaaagccggcaacaccaccgcctatcgg
cactactgggagctgtgcgtgctgctggggctgcgggacgggttgcgcagcggcgacgtg
ttcgtgccggggtcgcgccgctacgccgacccggccgcttacctgctgaccccgcaggcg
tgggagccgcagcgtgacgagttctgccgcctggtcggcaagtccgctgatccggcccgc
gccctggcgaccgccaccgacgagctgcacgacgctatgagcgagttggagaaggtgctc
gccgacggcgacggcccggtccgtctcgatgaggccggtgacctggtggtctcgccgctg
tcggcagaagacgttccggccgaagcggtggcgttgaagcaggagttgacggagatgctg
ccgttcgcgccgatcgtgtcgctgttgatcgagctggacaaacgcaccggctacctggac
tgcttcacccacgccggcggtaagcagtcccgcaccccggagttgaagcgcaacctcatc
gcggtgctgctggcctactccaccaacctgggtctcacccgtatggcggaggcctccggc
atctcctacgacatcctggcctggacttcggagtggtatgtgcgggaggagacgctgcgg
gcggcgaacctgacgatcatcgactaccaccaacgcctgccgctgaccccgatcttcggg
gccccggcaccctgtcctccagtgatgggcagcggttcccgacccgtggcaaatcggtca
ccgccagagcgttga
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