Nothobranchius furzeri (turquoise killifish): 107373337
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Entry
107373337 CDS
T05163
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107373337 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107373337 (prpf38a)
Spliceosome [BR:
nfu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107373337 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
107373337 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Plasmodium_Vir
Motif
Other DBs
NCBI-GeneID:
107373337
NCBI-ProteinID:
XP_015796973
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFICLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKVKCQNRNGEFELMHVDEFIDELLHAERVCDIILPRLQKRQVLEEAEMLDPR
ISALEEDLDEVESSEDEDEEEEKMERQPSPEPHRRGYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRRPSPRRDRHRSKSPHRHRSRSRNRRHRSKSPGHHRSHRHRSHSKSPERSSKKS
HKKSRREKD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagaacagttaaagatgcaaacagcatacacggaaccaacccgcagtacctg
gtggagaaaatcatccggacccgaatctacgagtccaaatactggaaggaggagtgcttc
ggtctcaccgcggagctggtggtggataaagccatggagctgaagtttgtcggaggcgtt
tatggtggaaacatcaaaccgactcccttcatctgcctcacgctgaagatgcttcagatc
caaccggagaaagacatcatcgttgagttcataaaaaacgaagattttaagtacgtccgt
ttgctgggagcgatgtacatgaggctaaccggcaccgccgtggactgttataagtacctg
gagccgctgtacaacgactacagaaaggtcaaatgtcagaacaggaatggagagtttgag
ttgatgcatgtcgacgagttcatcgatgagcttcttcatgcagagagagtgtgtgacatc
atcctgccccgcctacagaagagacaggttctggaggaggccgagatgttggacccacgg
atcagcgctctggaggaggacctggacgaagtggagagcagcgaggatgaggacgaggag
gaagagaagatggagaggcagccgagcccagagcctcacagacgtggttaccgtgacaac
gaccggccacgtcgctccccgtcaccccgctacagacgcagccgctcgcccagacggagg
agcagatctccaaagagacgaagaccgtcgcctcgcagagaccgccatcgcagcaagagc
ccccaccggcaccgcagtcgctccagaaacaggcggcaccgctccaaatcccccggtcac
caccggagccaccgacaccgcagccactccaagtctccagagaggagttcaaaaaagagt
cacaagaagagccgaagagaaaaagactga
DBGET
integrated database retrieval system
