Nothobranchius furzeri (turquoise killifish): 107374860
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Entry
107374860 CDS
T05163
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107374860
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107374860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107374860
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107374860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
fn3_2
DUF4998
NDNF_C
Motif
Other DBs
NCBI-GeneID:
107374860
NCBI-ProteinID:
XP_015798633
UniProt:
A0A9D2YBK0
LinkDB
All DBs
Position
sgr02:66832863..66889485
Genome browser
AA seq
2274 aa
AA seq
DB search
MGTLRLPACLLLIAMISSSNAGLIKKVLRHRRQTLLPPSEHNVTFPSAGHPVVFSHVYTI
NVPTSSLCSVDLESPDSSHLHPKDINSDHHVTEHTLDEDNQIVFTHRINIPRQACGCNDD
LAIVKDLMSRLEMLEGEVSALRDQCSGGGVCCSPETTGEFGTKPYCSGHGNYNAETHGCT
CDPGWKGPNCAEPECPASCQDHGHCVNGKCECFKGSGGDDCSIELCLVDCGAHGLCVGGV
CNCSDGFFGEDCSQTRCLNNCLGRGSCVDGDCVCNVPWTGFDCSELICPKDCYDRGRCVN
GTCYCDEGFTGEDCGERSCPKNCTGNGLCVDGGCICSAGYSGEDCSQLTCLNDCSGRGTC
FNGMCICDSGYQGEDCSQLACLNNCNSRGQCINGQCSCDVGFQGDDCSELSCPNSCLMRG
RCGNGQCVCDEGFTGEDCSIRLCPSNCYTQGECINGRCECHAGFAGEDCSELSCPNNCSN
QGHCISGQCVCDEGFSGENCSQKACPNDCLAQGHCYNGKCICQEGFTGEDCSVLACLDNC
NLRGRCINGTCTCDSGYEGESCADRSCINNCQDKGRCVNGQCACDEGYIGEDCSGVSPAK
DLKVGEVNASTVNLSWYNDMLVTEYLITYVPTSPGGLLMDFTVPGDKTAATVKELEPGIE
YLISVYAVLSNKRSIPVSARVATDLPQPEGLRFKSVRETSVKVMWDQLDISFDAWEIHFR
NTKEENGKVVSTVPSSQNHFLQSGLGPGQEYEVSLNVLKNNIKGPQTSTTVTTKIDGPRQ
VEVKDVTDSSALISWNLPVAHVDRVTMFYMPSSDPSNETTVDIFPPDKQYSVDSLRPDTE
YTVSIISRRGDATSDPATTSFMTELDAPTGLQAVSQTEDSITLEWTNSQANASGYRVKYS
PISGATHGEEVFPRGPGHTTQATITGLDPGTEHGIGVTAVKNERESLPATTNAATDLDPP
RDFEQVKSTETSLTVRWQKPQAKVSGYRLVYISRDGQTEEVEIPVTATTYILPNLTPGMS
YTLTLTAERGQRTSRPVSLSASTASFTFYSANSDIHEQTAPRDSENSSGVLQPSESQFSG
AELEDELGVLTVSGITFDGFDLSWKLKPHNVYDNLVVSYKGTQQLWGLREVKLPGDARGS
RLTGLKPLTEYQIHLKGVTSSQESSVLLEAVAVTAPLEEALETLLSTLENESPDLLLSLN
NEALPTSDAVVMSSGAEPESSAELKPTIVNLTISEISWDGFTASWSLTGGGFDSFVIEVT
NMENFEESQNLTLSGDALSLGISGLNPNTSYMVGLYGMHQGSFLEPLYSEATTATQPVIG
KLYVSNITSESFTIQWNGAERRFDGFILEIIDSDWLTEPKEYNISSNVTSLDIDGLRPST
HYVIYLYGTFKGSRSNAVSIVASTAEEPDLSKLVVSKVTSDRFSLSWRTGEKEFDRFIVE
VRESALPSQAMGRTLPGDVRSTVMAGLKASTSYSIKLYASEGDGQNTPPLFAVATTEDVP
KLGPLAASSMSPHNLSLFWNTVSGHFNSFVVQVSDPEQLSDPLEFRLPGEVRNVTVTNLT
DDSGYDVELYGISHGRRTPSVFAHAVTAPLPKVENLTISTVTPYGFRVSWEVRQQQEELS
PSSGGFSHFHIVVTDSGRLLEPQDFTVPGNQSHLDMWGLITGIGYEVKLTGVSESGLLSR
PLTIVAVTEAEPEVEHLFVSDVTADGFRLSWTTDHDLFDRFVIKVRDSKRLAHPQEFSAR
SDKRTKVITGLMSGTEYEIELYGVTVDQRSQPITAVAQTALSAPKGLHFTEVTDSTARVH
WSKPDFDMEKYRITYVPQEGGIPLSMMADGSVSEILLINMLPGKAYHVTVTALKGLEESE
PSSGSVTTALDSPRGVTAANINDTSALLLWQPCVATVEGYVITYSTDSAPPVIEHVSGNT
VEFEMNSLLPGSLYRVGVHGLRETQKSTPAVTEFTTDVDPPRDLKADNVQTDSAVLTWKP
PHAAVTGYALTFFSAGGAIREVTLSPTASSYTMSQLTVSTEYNVRLQAIAAAKRSRYVTT
TFSTSKAGQVFAWPWDCAQILLNGETASGLYTIYIGGEDTQPLQVYCDMTTDGGGWIVFL
RRQNGKLEFFRNWKSYTAGFGNMNDEFWLGLSSLHKITSSGQYELRVDLRDKGESAYAQY
DRFTIAEPRTRYKLYLGAYDGTAGDSMTYHNGRPFSTYDNDNDIAVTNCALSYKGAFWYK
NCHRVNLMGKYGDNSHSKGINWFHWKGHEHSIQFAEMKIRPSNFKNFESRKKQS
NT seq
6825 nt
NT seq
+upstream
nt +downstream
nt
atgggcacacttcgtcttccagcctgtctgcttctgatcgctatgattagttcctcaaat
gctggactcatcaaaaaagtcttacgacatcggcgacagaccctgcttcctcctagtgaa
cataacgtcaccttccccagtgcaggacatcctgtggttttcagccatgtatacaccatc
aacgttcctaccagttccctgtgctcggtggacctggaatccccagacagcagccatctc
catcctaaagacatcaactcagatcaccacgtcactgaacacacactcgatgaggacaac
cagatcgtcttcacacaccgtattaacatacctcgacaggcctgtggttgtaatgatgac
ttggccatcgtcaaggacctcatgagccggctggagatgcttgaaggagaagtttcagct
ttgagggatcagtgtagcggtggaggggtctgctgcagtcctgaaactacaggtgagttt
ggaacaaaaccttactgtagtggccatggaaactacaatgctgaaacccatgggtgtaca
tgtgatcctggctggaagggacccaactgcgcagagcccgagtgtcctgctagctgccag
gaccacggccactgcgtgaatggaaaatgtgagtgcttcaagggctccggcggggatgac
tgttcaatagagctctgcctggtggactgtggagcgcacggcctctgcgtgggcggtgtt
tgcaactgttcggatggtttctttggcgaggactgctctcagactcggtgcttgaacaac
tgcctgggccgtggttcctgtgtggatggagactgtgtgtgtaacgtgccttggactggc
tttgactgctctgaactcatctgccccaaagactgctacgaccgcgggcgctgcgtgaac
ggtacctgctactgtgacgagggcttcactggagaggactgtggagagcgctcttgtccc
aagaactgcactggcaacggtctctgtgttgatggtggatgcatttgctctgcaggatac
agtggtgaagactgctctcaactcacctgcctgaatgactgcagtggcagaggcacatgc
ttcaatggaatgtgcatctgcgactccggctatcaaggggaagactgcagccagttggcg
tgtctgaataactgcaacagtagaggccagtgcatcaatggacagtgttcatgtgacgtc
ggtttccagggggatgactgttccgagctttcctgtcccaacagctgcttgatgagggga
cgttgtggaaatggccagtgtgtctgtgatgagggttttactggggaagactgcagcatc
cgcctctgcccctcaaactgctacactcaaggggagtgtattaacggacgttgtgagtgc
cacgcaggctttgctggcgaggactgcagtgaactgagctgccctaacaactgcagcaat
cagggccattgcatcagtggccagtgtgtttgtgacgaaggtttcagtggtgaaaactgc
agtcagaaagcttgtccaaacgactgtctggcacagggtcactgttacaacggcaaatgc
atctgtcaggaagggttcactggagaggactgctctgtgcttgcatgtctggataactgc
aacctcagggggcgctgcatcaacggaacgtgcacgtgcgatagtggatatgagggagaa
agctgtgcagaccggagctgcatcaacaactgccaggacaaaggtcgctgcgtgaacggt
cagtgcgcctgtgacgagggatacatcggggaggactgctcaggagtttctcctgcaaag
gacttaaaggttggagaggtcaacgccagcacggtgaacctgtcctggtacaacgatatg
ctggtcacagagtatctcatcacgtatgtccccaccagtcctgggggtcttctcatggac
tttactgtgcctggagacaaaaccgccgccaccgttaaagagcttgaacctggcattgag
tacctgatcagtgtctacgctgtcctgagcaacaagaggagcatccctgtcagtgcaaga
gtggccacagacctcccgcagccagaaggcttaaggtttaaatcagtgagagagacctct
gtaaaggttatgtgggaccagctggacatctcttttgacgcctgggagatccatttccgc
aacacgaaagaagaaaacggaaaagtcgtgagcacagttccatcgtctcaaaaccacttc
cttcagtctgggcttggaccaggacaggagtacgaggtgtccctcaacgtcctcaagaac
aacatcaaaggaccccaaacatctacaacggtcactaccaagattgacggtccgcggcag
gtggaagtgaaggatgtgacggactcttcggctttgatcagctggaatctacctgttgct
catgtggacagagtcaccatgttttacatgcccagctctgacccatcgaacgaaaccacg
gtggacattttccctcctgacaaacagtacagcgtggacagtttgaggccagacactgag
tacactgtttcaataatttcaagacgtggagatgcaacaagtgaccctgccaccacctca
ttcatgacagaactggacgcccccaccggcctgcaagcggtgtcacaaacagaagacagc
atcactctggagtggaccaacagccaggctaatgctagcggctatcgagtgaaatacagc
cccatctctggcgccactcatggtgaagaagtgttcccacggggaccgggacacaccaca
caggctaccatcaccgggttggatccggggacggagcatgggatcggagtgacagctgta
aagaacgaaagggaaagtctccctgctactactaatgcagcgactgacctcgatcctccc
agggactttgaacaagtcaagtccacagagacgtctctgacggtgaggtggcagaaaccc
caagctaaagtgagtggatacagactggtctacatctccagagatggccagacagaagaa
gtagagatcccagtcacagcaactacatacatccttcctaacctgactcctggaatgagc
tataccctcactttgactgcagagaggggccagagaacgagcaggcctgtttcactatca
gcatccacagcctctttcaccttttattctgctaactcagacatccatgagcaaacagct
cccagagactcagagaatagctctggggttttacaaccatctgagtcccagttttctggg
gcagagcttgaggatgagctcggagtgctgactgtttccggcatcacgtttgacggattt
gacctctcttggaaactaaagcctcacaatgtttatgataatttagttgtgtcatataaa
ggcactcagcagttgtggggtttgagagaggtcaaacttcctggagatgcccgtgggtct
agactcaccggcctgaagccgttgacagaatatcaaatacacttaaagggagtaacaagt
agccaggaatcatctgtgctacttgaagctgttgcagtcacagcacctctagaagaagct
ctggaaaccctactgtccactctggagaatgaaagcccagatcttctactttcactaaac
aatgaagcactgcccacatctgatgctgttgtgatgagttctggggctgagcctgaaagc
tcagctgagctgaagccgactatagtgaacctcaccatatccgaaatttcctgggatggt
ttcactgcatcctggagcctcactggggggggctttgacagctttgtcattgaggtaaca
aacatggagaattttgaagagagccagaacctcactctctctggcgacgctttgagcctg
ggtatctctgggttgaaccctaacaccagctacatggttggcctgtatgggatgcatcag
ggctccttccttgaacccctgtacagtgaagccaccacagcgactcagcctgtgattggc
aaactatacgtctcaaacataacatccgagagctttacaatccagtggaatggtgctgag
agacggtttgatggttttatcctggagataattgactctgattggctgacggagccaaag
gaatacaacatctccagtaatgtaacatcccttgacattgacgggctcaggcccagcacg
cattatgtaatctacctctacgggactttcaagggatctcgttcgaatgctgtcagtatt
gttgcatccacagctgaagagcccgatttgtccaagctagttgtttctaaggttacctct
gacagattctctctgtcatggcgaacaggagagaaggaatttgataggtttatagtagaa
gtcagagagtctgctttgccctcgcaggcaatggggcgcactcttccaggagatgttcgc
tctacagtaatggccgggctcaaggcgagcacgagctacagcataaaactttatgccagt
gaaggtgatggccagaatacaccgcctctgtttgctgtagcaacaacagaggatgtccca
aagttggggcctctggctgcttcgtcgatgagccctcataacctgagtttgttctggaac
actgtatcaggacactttaacagctttgtagtccaggtcagtgaccctgagcagctgtct
gatccgctggagttcaggctgcccggcgaagttcgtaacgttacagtaacaaacctgact
gatgactcgggctacgacgtcgaactttacggtatttctcacgggcgtcgcactccctct
gtgtttgcccacgctgtgacagctcctttacccaaagtggaaaacttgaccatttccacc
gtaaccccctacggtttcagagtgtcctgggaggtcaggcagcagcaggaggaattatca
ccatctagtggcggtttcagccacttccacatagtggtgacagactctggccggctgctg
gagcctcaggacttcacagtgccggggaaccaaagtcatctggacatgtgggggctcatc
accggcataggctatgaggtcaagttgacgggggtgtcagaatcggggcttctctctcgg
cctctgactatagtggctgtgacagaggctgagccggaggtggagcatctcttcgtctcg
gacgtcacggctgacggtttccgtctgtcgtggaccacggaccacgacctgtttgacaga
tttgtcattaaagtcagagacagtaaaaggttagcccatccacaggagttcagcgcccgc
agcgacaagaggaccaaggtcataactggcctcatgagtggcactgagtatgaaatcgag
ctttatggcgtcacagtggaccaacgctcccaaccaattacagcggttgctcagacagcc
ctaagtgctcccaaaggtcttcatttcactgaagtgacagattctacagctcgagttcac
tggtccaaaccagattttgacatggagaaataccgcatcacctacgtgccacaggaagga
ggaatcccgttgagcatgatggcagatggaagcgtgtcggagattctcctgatcaacatg
ttgccagggaaggcctaccacgtcactgtgactgccctgaaaggtttggaggagagcgag
cccagctccggctccgtgaccacagctttggacagtccgcggggtgtgactgcagccaac
atcaatgacacatcagctctgttgctgtggcaaccatgtgtagccactgtcgaaggctac
gttatcacgtacagcacagactcggcacctccggtgattgagcatgtttctgggaacacg
gtggagtttgagatgaactccctgcttcctggatctctctatagagttggagttcatggt
ttgagagagactcagaagagcacccctgctgttactgaattcaccacagatgtggatccg
cctcgtgacctgaaagctgataacgttcaaaccgacagcgctgttctgacctggaagcca
cctcatgctgccgtcactggctacgcgcttaccttcttctctgctggcggtgccattaga
gaggtaacgttgagcccaacagcatcgtcgtacaccatgtctcagctgaccgtttccaca
gagtacaacgttcgcctgcaggccatcgctgcggccaagcggagccgttacgtaaccacc
acattttccaccagtaaagctggacaggtgtttgcgtggccctgggactgtgctcagatt
ttactgaacggagagacggcctctggtttgtacaccatctacataggaggggaggatacc
cagcctcttcaggtttactgtgacatgaccacagacggtggtggatggatagttttcctc
agacggcaaaatggaaagctggaattcttcaggaactggaagagctacacagctggcttt
ggaaacatgaatgatgagttctggctgggtctctccagtctccacaaaatcacatcttcg
ggacaatatgagctgagagtggacctgagagacaaaggggagtcggcctatgctcagtat
gataggttcaccattgcagagccaagaacacgctacaagctctacttaggagcatacgat
gggacagcaggtgactcaatgacttaccacaatggtcggcccttctccacctacgacaac
gataacgatatcgccgtgacaaactgcgccctgtcctacaaaggggctttttggtataaa
aactgtcatcgggtcaacctgatggggaaatatggggacaacagccatagtaagggaatt
aactggttccactggaaaggtcacgaacactcaatccaatttgcagaaatgaagattaga
ccatccaacttcaaaaactttgagagccgaaagaaacaatcgtag
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integrated database retrieval system
