Nothobranchius furzeri (turquoise killifish): 107377827
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Entry
107377827 CDS
T05163
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107377827 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107377827 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107377827 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF948
Motif
Other DBs
NCBI-GeneID:
107377827
NCBI-ProteinID:
XP_015803183
LinkDB
All DBs
Position
sgr04:complement(58356728..58601751)
Genome browser
AA seq
3233 aa
AA seq
DB search
MNRLLLLLLLLIDALLWQCCHAQQRGLFPAVLNLATMADITANATCGSTSPEMFCKLVEH
VPGQPVRNPQCRICNLQSTNSFERHPIEYAIDGTNRWWQSPSIKNGMEYHYVTITLDLKQ
VFQIAYVIIKAANSPRPGNWILERSIDGVTFDPWQYYAITDTECLTRFNINPRTGPPSYT
RDDEVICTSFYSKIHPLENGEIHTSLINGRPSAEDPSPTLLNFTSARYIRLVFQRIRTLN
ADLMTLTFSDSTDIDPIVTRRYYYSIKDISVGGMCICYGHAKACPLSAATKKFSCECEHN
TCGESCDHCCPGYHQQPWMAGTFLTRHVCEKCNCHNKAEECYFNQTVADLSLSLDIHGKY
RGGGVCIGCRGNTAGVNCQSCIPGYYRPPEVSADEDHPCISCSCDPQGSVSQSCVADPSQ
ATSSQPAGSCWCKEGFGGLRCDRCAVGYKDFPSCQRCECSVEGSTNTDPCITPCVCKENV
EGENCDRCKHGFYNLQRGNRRGCDKCFCMGVSSQCSPSTWSYDNETTLAGWHLVGETGGR
VWPIHRQTPSSLSIRHLEVVDNLGSAYYWSAPASYLGNKLAAYGGKVTFMVSYTTDQQEQ
IRVTSEPDLVIEGGGMKIVDKRYGQPVYPSSTSTKHIVLLPENFLVSETGQPISRRDFMS
VLVNVTSMMVRASYSTETSAVYRLHSFLMQVANPFAKGERASAVEMCTCPPGYAGLSCEA
CTSGHRRINGNLYNGVCEPCHCHGHSTWCHEVTGHCLNCSHNTMGQHCDTCLPGYYGNAT
RGSPEDCQPCACPLSIPSNNFSPTCRLGEQGEVLCDQCRPGYAGPRCDRCANGFYGQPSV
PEGSCQPCDCTGNLDLSLPGSCDPITGQCLRCRQGYGGDTCEICVDGYYGDAVIAKNCTP
CQCHSNGSVSEVCNRESGQCQCRENVVGRQCDKCMPNCWWDAEHQECFPCMCSPLGSASQ
RCDTEGHCTCRPGFMGRRCDLRRLGYERRETRRPVERIPLEAVQQRWRGASRVGGCPRGA
YKPQTGPETHGLATGGVCVPCHCNSYGSKSFDCDELGQCRCQPGISGAKCDRCSRGFFNF
QEGGCTACQCSHVGNNCDANTGQCTCPPNTIGERCDRCAPNHWSHDIVIGCKECGCNVIG
SVTQQCNANTGCCFCRDSFRGEKCDECRIGFRDFPQCIQCQCSIAGSDSQTCDLERRACA
CADRTGKCSCKENVEGDNCDVCKPERFGLSVKNPLGCSRCYCYGLTHSCTEAQGLVRMRL
TLRPEQTVLPLVDKSNTVERRTGVSFQHPEILAHADRVTPGLSEPYYWKLPEQFTGSMIT
AYGGQLKYAAYYEARDETGPSSYEPQVIIKGGPNRNVVITRHIPGLQIGQLTRHEIDMTE
HEWKYADGLSLTREDFMDILFYVDYILIKASHGNLMRHSRISEISLTVAEAGTPTEENQR
AHQIEKCDCPAGYSGLSCEECAAGFYRLRSGSLGPTPASRAPTAAGMGSCVQCQCGGHSS
TCDPETSICLNCQDNTEGDHCERCAPGFYGVVQGFSDDCKPCACPLTNPENNFSPTCVAE
GFDDYRCTACPEGYEGKYCERCSTGYHGNPRMPGGRCEECKCASWGALPGPCDPVTGQCH
CRVGASGVACDQCMDRHVCGPSGIISCDDECSGLLISDMDRLYRIITDVTLTSPLPPPYK
VLYRFENMTEELKHMLSPQKAPERLLQLADSNMGSLVVEMDQLHSRATKVSADGEQVEDD
ADRIHKRAEDLEQFIKDTLLGAKDLQSKAAELNETLSRKDGTPDKSLSEMKEEIQAMLAE
MRKRQLGGKKSIAEEEENLAEELYQKVKRLFGDPHQATEDLKAEIKEKLSDHEAKLQEAQ
DLLSSAQGKTRQAGSLAEQNRANLTLLERKRSAAGAIKQEAQESLGEGENLLEEANQLSD
NINKELEDLEEMSRDLGPLRDQLEDKVQGLTDGLSGDNLAKQVDEAEEHARQLNESAALL
DGILAEAKNLSFNATAAFHAYANIKANVDAAEKEAKVAKQRAGEALALALGPDVPVKEAA
QRGLQESETLLSKARQLEHDVNENADDVAGLKGRVKAARDKTRDLFKAANGTMVMLGAIP
NDTAAKLAATKAVAAEANATATDVLERLRELNLRIGGLQQNYSELEDTVNSANQIIQDPE
QNTIIHAAGAKVKDLEDEADRLLEKLQPIKKLQDNLRRNISQIKELINQARKQANSIKVS
VSSGGDCLRSYRPDIRKGRYNTIILHVKTTTPDNLLFYLGSAKYVDFLALEMRKGKVNFL
WDVGSGVGRVEYPHLTIHDGNWHRIEASRNGLNGTISIYPLEGTKAGMMPTPASSNSPTA
FTILDVDQNAYLFVGGIFGTIKKAEAVRTSTFSGCMGETFLDGKPIGLWNYRKREGDCKG
CVVSPQRTIGEGTVQLDGEGYAAVGRPTRWNPNVSTITFKFRTFSSDALLMYLATEDMKD
FMSLELSEGKVKVNFDLGSGVGAALSASRHNDGRWKALTMSRNKKHATVIVVDIDGGAEE
RITASSQGLATGLNLRENQKIYFGGLPTIGNYSMAARSEVTLKKYAGCLGDIEVSRTPYN
LLSSSDYNGVTKGCEVENLYTVSFSKPGYVELSGFSLNVDTEISLSFGTLKDTGTILLAV
GGASPGSLQARRANLLSPQRRRRQSGEPYLSVMLNKGSLEVLIFTGSHNPRRVIRRPEQG
VLNDGREHSLRIERLPGRLFAVQVDEEPKREAALPNDQPMSLQRVFLGGIPAEVERTSNR
ANIPFQGCIWNLMVNAVLSDFSQPVSFENAEIGQCPNLAPPPPPLPLPGEEEQKPATPPP
AEATPLSAVAPPTARSDPATDLDSCASAEAPVVLEQAHQFGLTRNSHMSFAFDDTKVREK
VVLELELRTKEQSGLVLYMARINHADFVSIQVKDGQVCLGYDLGHGNTSGCVPFSINDGS
WHKIRVNRHKQRALLSVDGNYTKHMTSPKKADLLDVVGLVYVGGLPLNYTTKRIGPILHS
INGCLRNLRMGGGLTSVATGRSKLIDMDLKLDMATPTSSHMVGRCFVATETGTYFDGTGY
LQAVASYRVGLDVSITLEFRTSRTSGVLLAVSNKASDGLGLEIVQGKLLFHVDNGAGRIT
ALHVPEGKGFCDGRWHTLTANKIRHRVELIIDGKRSQAQSPNPRSNTCDTNDPVYVGGHP
AGVRQAALSTNTSFKGCMKNLKITKASKTMDVHFNKAVKIKGVQPLSCPAVAA
NT seq
9702 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacttcttcttctcctcctgttgcttatcgacgcgttgctatggcaatgctgc
catgcccagcagagaggactgttccctgccgtgttaaacctggccactatggcagacatc
acagccaacgccacctgtggctccaccagtccagagatgttctgtaagctggtggaacac
gtaccgggccagcctgtgaggaacccacagtgtcgaatctgcaatctccaaagcaccaac
tcatttgagcgacatcccatcgaatacgccatagatggaaccaaccgctggtggcaaagc
ccctccattaagaacgggatggagtatcactatgtgacgatcacactggacctgaagcag
gtcttccagattgcctacgtgataataaaggctgccaactcaccacgtccaggtaattgg
atcttggagcgttcaatagacggagtgacttttgacccatggcagtactacgccatcaca
gacaccgagtgcctgacaaggttcaacatcaacccgcggaccggaccgccatcctacacc
agagatgatgaagtcatctgcacgtctttttactctaagattcacccgctggaaaacgga
gagatccacacatcgctgatcaatggtcgacccagtgctgaagacccatccccaaccttg
ttgaactttacttctgcccgctacatcaggctggtgttccagcgaataagaacgctgaac
gccgacctcatgaccctgacgttcagcgactccacagatatcgatcccatcgtgacaaga
cggtattactactccattaaggacatctcagtcggagggatgtgtatttgttacggccac
gccaaagcttgcccgctcagcgccgccacaaagaagttcagctgtgaatgtgaacacaac
acgtgtggcgagagctgtgaccactgttgcccaggttaccaccagcagccatggatggca
ggaaccttcctcactcgacacgtctgcgagaagtgtaactgccacaataaggcagaggag
tgctactttaaccagacagtcgctgatttgtcgctcagtctggacatccatggtaagtac
agggggggcggagtctgtatcggctgccgtggcaacacagctggagtcaactgccagagc
tgcattcctggttactatagacccccagaggtgagtgcagatgaggaccatccctgcatc
tcatgctcgtgtgacccacagggttctgtcagccaatcatgcgtcgcagatccgagccaa
gccacttccagtcagccagcggggtcatgctggtgcaaagaaggttttgggggcttgcga
tgtgacagatgtgctgttggttacaaggacttcccatcctgtcagcggtgcgaatgcagc
gtggaaggaagcaccaacactgacccgtgcataactccctgcgtgtgcaaggaaaacgtg
gagggagagaactgcgaccgctgcaaacatggattctacaacctgcagcgcggcaacaga
cgcggctgtgacaagtgcttctgcatgggtgtttccagccagtgctcgccctccacctgg
agctacgacaatgagaccactctggctggatggcacctggttggagaaacaggagggagg
gtgtggcctatccacaggcagacgccttcctctctcagcatcagacacctggaggttgtg
gataatcttggctccgcctactactggagtgcacctgcttcatacctgggaaacaagttg
gcagcttatggaggaaaagtcactttcatggtgtcgtatactacagaccaacaggagcaa
atcagagtcacctcagagccggaccttgttatagagggaggtgggatgaagattgttgat
aaacggtatggccagccggtgtacccatcctcaaccagcaccaagcacattgttctcctc
ccagagaacttcctggtttcggaaacggggcagccaatcagtagaagggattttatgtct
gtgctggttaatgtgacaagcatgatggtgcgtgcatcctacagcacagaaaccagtgct
gtttacagactccactcattcctaatgcaggtagcaaatccttttgccaaaggagagaga
gcatcagctgtagagatgtgtacctgtcctcctggatacgccggattatcatgcgaggct
tgtacttcaggtcatcggaggatcaacgggaatctgtataacggtgtctgtgaaccttgc
cattgtcatggacacagcacatggtgccacgaagtgacagggcattgcctgaattgctcc
cataacaccatgggccaacactgtgacacctgtcttcctggttactatggaaatgccact
cgtgggtcacctgaggactgccagccatgtgcctgcccactcagtattcccagtaacaac
ttcagccccacctgccgcctaggtgaacaaggggaggtgctttgtgaccagtgtcggcca
ggttacgctgggccacgatgcgacagatgtgccaatggattctacggccagcccagtgta
ccagaaggatcctgtcaaccctgtgactgcactggcaacttggatttatccctacctggc
agctgtgatcctatcacaggccagtgtttgaggtgtcgccagggttacggtggagacact
tgtgagatctgcgtggacgggtactatggagatgctgtcatagcgaagaactgcacaccc
tgccagtgccactcgaatggttctgtgtctgaagtgtgcaacagggagagcgggcagtgt
cagtgcagagaaaacgtggttggacgacagtgtgacaagtgcatgcctaactgctggtgg
gacgctgagcatcaggagtgttttccctgtatgtgcagtcccctcggctcagcgtcccag
cgctgtgacacggagggtcactgcacctgtcgccccggcttcatgggccgacgttgtgac
ttgcgtcgccttggttacgaaaggcgggagacgcggcgacctgtggagcgcatccccctt
gaagctgtgcagcagaggtggcggggagcctcccgtgtggggggctgtcccagaggagcg
tacaaacctcagacagggcctgagactcatggcctagctacaggtggggtgtgtgtccca
tgtcactgcaactcgtatggttccaagtccttcgactgtgatgaactgggtcagtgtcgg
tgtcagccgggcatcagcggagccaaatgtgaccgatgctcaagaggattcttcaacttt
caggagggcggctgtacagcctgtcagtgcagccatgtgggaaataactgtgatgccaac
accggacaatgtacttgtcctcccaacacaataggagagcggtgtgatcgctgtgctcca
aaccactggagccacgatattgtaattggatgcaaggagtgtggctgcaacgtgattggt
tcagtgacccagcagtgcaacgccaacactggctgctgcttctgtcgcgattccttcaga
ggagagaaatgtgacgaatgtcggattggattcagagacttccctcagtgcatccagtgc
cagtgtagcatcgcagggtcggacagccagacctgcgacctggagaggagggcgtgtgcc
tgtgcagaccgaacaggaaaatgtagctgcaaggaaaatgttgaaggggacaactgtgat
gtgtgtaagcctgaaaggtttggattatcggtgaaaaatccactgggctgcagcagatgt
tactgttatgggctgacccactcctgcactgaggcacagggacttgtaaggatgcggtta
acactgaggccagagcagacggtgctccccctggtggataaatccaacaccgtggagagg
aggaccggcgtcagcttccagcacccggagattctggctcatgcagatcgggtcactcca
ggtctgtctgaaccctactactggaaactgccagagcagttcacaggctctatgatcaca
gcttacggtgggcagctgaagtatgcggcgtactacgaagccagggatgaaacgggtccg
tcttcctacgagccccaggtcatcattaagggtggtccaaaccgtaacgtcgttatcacg
cgacacatcccagggcttcagatcggacagctcacccgccatgagatcgacatgacagag
cacgagtggaaatatgcagatggtctgtcgttgactcgagaggacttcatggacattttg
ttctatgtggactacatcctaattaaagcttctcatggcaacttgatgagacatagccgg
atttcagagatcagcctaactgtggcagaagcaggaacgccaacagaagaaaaccagaga
gcccatcagatagaaaagtgtgactgtccagccggatactccggactctcatgtgaggaa
tgtgcagcaggtttctaccgtctccgctccgggtcgctgggtccaactccagcctccaga
gcgcccaccgctgctggcatgggcagctgtgttcagtgtcagtgcggtgggcactcgtcc
acgtgtgaccctgagacatccatatgcctgaactgtcaagacaacacagagggggatcat
tgtgaacgttgcgctcccggattctacggtgtggtccaaggtttttctgatgactgcaag
ccctgcgcctgccccctcaccaaccctgagaataattttagtcctacctgcgtagctgag
ggattcgacgactaccgttgcaccgcttgtcccgagggatatgaagggaaatactgtgaa
aggtgctccactggttaccacggtaacccaaggatgccaggtggtcgctgtgaggagtgt
aagtgtgcctcatggggggcgttgcccggaccatgtgaccctgtcacgggccagtgccat
tgcagggtcggggcctcgggggttgcgtgtgaccagtgcatggataggcatgtgtgtgga
ccatcggggatcatctcctgtgatgacgagtgctcgggtttgctgatcagcgatatggac
cggctctatcgtatcatcaccgacgtcaccctgacctcacccctgccacctccttataag
gttttataccgctttgagaacatgacagaggagctgaagcacatgctgtcccctcagaaa
gctcccgaacgattactgcagctggctgactctaatatgggatcactggttgttgagatg
gaccagctccacagtcgggccactaaggtgtctgctgacggagagcaggtggaggacgat
gctgacaggattcataaacgagctgaagacctggagcagttcatcaaggacacactgctg
ggagccaaagaccttcaatccaaggctgctgagctgaatgaaaccctctcacggaaagat
ggaacgcctgacaagagcctgagtgagatgaaggaggagatccaggcgatgcttgctgag
atgagaaaacgacagctaggaggaaagaaaagcatcgcagaagaggaggagaacctggcc
gaggagttgtaccagaaagtcaaacgactgttcggagacccccaccaggccacagaggac
ctgaaagctgagattaaagagaagctgtcggatcatgaggcgaagctgcaggaggctcag
gacttactcagctccgcccagggaaagacgaggcaggccgggtcgctagctgagcagaac
cgagccaacctcacgctcctggagaggaagcgctctgcagccggcgcgataaagcaggaa
gcacaagagtccctcggagaaggagaaaatctgctggaggaggcgaaccagctctccgac
aacatcaacaaggaactagaggacttggaagagatgagcagagacctcggtcctcttcgt
gatcagctggaggacaaagtccaaggcctcaccgacggcttgagtggtgataatttggcg
aaacaggtggacgaggcagaagagcacgccaggcagctgaacgaatctgcagcccttcta
gacggtattttggccgaagctaaaaacctctccttcaacgccaccgctgccttccacgct
tacgcgaatatcaaagccaacgttgatgcagcggagaaggaggcgaaggtcgccaaacag
agggccggcgaggcgctggctctggctttaggtcctgatgttccagtaaaggaagcagct
cagagaggcctccaggagagcgagacactgctgagcaaagccagacaactggaacacgac
gttaacgagaatgcagatgatgtggcggggctcaaaggcagagttaaagcagcgagagac
aaaaccagggacctcttcaaagctgctaatggaaccatggtgatgcttggcgccatcccc
aatgatacagccgctaaactagcagctacaaaggctgtagcagctgaggctaacgccacg
gccacagatgtcctggagcgcctcagggaattgaacctgcggatcggtggcctgcagcag
aactacagcgagctggaggacaccgtcaattcagccaatcagattatccaagacccggag
caaaacacaatcattcacgctgcaggagctaaagtgaaagacttggaggacgaagctgac
cgactcttggagaagctgcagccaatcaaaaagctgcaggacaatttgagacgcaacatt
tcccagatcaaagaactgatcaaccaggccaggaaacaagcaaactcgataaaagtttcg
gtttcgtctggaggtgactgtctccgtagttaccgccctgacatcaggaaaggcagatac
aacaccatcatcttgcacgttaaaaccaccacacctgacaacctcctcttttaccttgga
tctgctaagtatgtggactttttggccttggaaatgcggaaggggaaagtgaatttcctc
tgggacgtgggttcaggtgtgggtagggtcgaatatccacatctcaccatccacgatggg
aactggcaccggatcgaggcgtctcgtaacggtctgaacggcaccatatccatatatcct
ctagaaggcaccaaggctggcatgatgccgaccccggccagttccaactcacccacggct
ttcaccatcttggacgtcgaccagaacgcctacctgtttgtaggcgggatatttggcacc
atcaagaaagcagaagcagtgagaacatcaacgttctccggctgtatgggagagaccttc
ttggatggtaaacccatcggtctgtggaactacagaaagagagagggggactgtaaaggt
tgtgttgtcagccctcagcggaccatcggtgagggaacagttcagctggatggtgaaggc
tacgctgcggtgggaagaccgaccaggtggaaccccaacgtttccaccatcaccttcaag
tttcgcactttctcctctgacgctctgctcatgtacctggccacagaagacatgaaggac
ttcatgtccctggaactgtcggaaggaaaagtgaaggtgaactttgaccttggatcagga
gtcggcgccgcactttctgctagccgccacaacgatggccgctggaaagccctcaccatg
tctaggaataagaaacatgccaccgtgattgttgtggacattgacggcggcgcagaggag
aggatcacggcctcttcccagggtttggccaccggtctgaatctcagggaaaaccagaag
atttattttggcggtctaccaacaatcggaaactacagcatggccgccaggtcagaggtg
actctgaagaaatatgcaggttgtctcggagacattgaggtctccagaactccgtacaat
ctcctgagcagctcggattataacggggtcactaaaggatgtgaggtggagaacctgtac
acagtcagtttctccaagccgggctacgtggagctgagtggcttctccctcaacgtcgac
acagagatcagcctgtcattcggcaccctgaaagacacggggactatcctgctggcagtg
ggcggagcttcaccaggcagcctgcaggcccgcagggcgaacctgctgagccctcagagg
agacgaagacagtcgggagagccctacctctcagtcatgctgaacaaaggatctcttgaa
gtcctgatcttcaccggcagccataacccacgccgagtcatccggcgacctgagcagggc
gttctgaacgatggcagagagcattcgctgcgtatagagcggcttcctggcagattgttt
gcagtccaggtggatgaggagcccaaaagggaggcagcactccccaacgaccaaccgatg
agcttgcagcgtgttttccttggtggtattcctgcagaggtggagcggacatccaacaga
gccaacatcccgttccagggatgcatatggaacctcatggttaatgccgtcttgtcagat
ttctcccagccggtttcctttgaaaacgctgaaatcggccagtgccctaacctggctcca
ccacctcctcctcttcctctgccgggagaagaggagcaaaagccagccactcctcctcct
gctgaggccacgcccctttctgctgtagctccacccactgctagatcggatcctgccaca
gacctggattcgtgtgcttcggctgaggccccggtggtgctggagcaggcccaccagttt
ggactgaccaggaacagtcacatgagctttgcatttgatgacaccaaagtcagagagaag
gtggttctggagcttgagctgaggacgaaggagcagtcgggtcttgtcctgtacatggcg
aggatcaaccatgccgacttcgtctccattcaggtcaaggacggacaggtctgtcttggt
tacgatcttggccatggaaacacttctggctgtgtccccttctccattaatgatggcagc
tggcacaagatccgcgtgaatcggcacaagcagcgagctctcctgagcgttgatgggaat
tataccaaacacatgaccagtccaaagaaggcggacctgttggatgtggtgggactggtg
tatgtcggtgggctaccactaaactacacaaccaaacggatcggcccaatcctccacagc
attaatggatgccttcgtaacctgaggatgggtggaggtctcacctcagttgctacaggt
cgttccaagttaatcgacatggacttgaagctggacatggccacgcccacttccagtcac
atggttgggaggtgttttgttgccactgaaactggaacctattttgatggaactgggtat
ctgcaagcagttgcctcctacagagtgggcctggacgtgtcgataacgctggagtttcgc
accagcagaaccagtggggtgctactggccgttagtaacaaagccagtgatggactgggt
ctggagatagtccagggcaagctgctgttccacgtggacaacggcgcgggtcgcatcaca
gcgctgcatgtgcctgaaggaaaaggcttctgtgatggacgctggcacactctcaccgcc
aacaagatccgtcaccgggtggagctgatcattgatgggaagcggagccaagcgcagtct
cctaatccacgctccaacacctgcgacaccaatgatcctgtctacgttggaggacatcct
gctggagttcggcaggcagctttgtccacaaacacgtccttcaaaggatgcatgaagaac
ctaaagatcaccaaggcttccaagaccatggatgtccattttaacaaggctgtaaagatc
aaaggagttcaacctctgtcctgtccagctgtagctgcttag
DBGET
integrated database retrieval system
