Nothobranchius furzeri (turquoise killifish): 107378159
Help
Entry
107378159 CDS
T05163
Name
(RefSeq) neurexin-3b isoform X1
KO
K07377
neurexin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107378159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107378159
Membrane trafficking [BR:
nfu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
107378159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
107378159
NCBI-ProteinID:
XP_015803709
LinkDB
All DBs
Position
sgr04:complement(65122261..65578242)
Genome browser
AA seq
1719 aa
AA seq
DB search
MMDPSGLVGHFLLLLSIMLGLSVSLEFTGSEDQWARYLRWDASSKSDLTFQFKTSQSEGM
LLYFDDGGFCDFLLLSLSEGKLQLLVSIDCAETTITSEKRVNDSRWHFAAINRQNLWTGL
AVDGQTKTGEVRPQRQFMKIVSDLFLGGLPGDIRTSAITLPSARELPPFKGIITNLSYGN
KFPTLINSHKVRLEMMGLCTENPCENGGICSLADGETYCDCSKTGYVGRYCTEAVRRKPE
LAHLKAEQGRSKAREENVATFRGSEFFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSWHDIKVTRNLRQQSGIGHA
MVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCL
REVVYKNNDIRLELSRLARIVDPKMKLHGDVVFKCENVPTLDPINFENPDSYLAMPKWNT
KRVGSISFDFRTSEPNGLILYTHGKPQDRRDAKGQKNNKVDFFAVELLDGGLYLLLDMGS
GTIKVKATQAKVNDGAWHHVDIQRDGRSGIISVNSRRTPFTASGENEILDLEGDLYLGGL
PDSRVDLVRPTELWTAMLNYGYVGCIRDLFIDGRSNDIKQIAQSQNVTGIKSSCSKATGK
QCDSSPCKNNGVCKEGWNRFICDCTGSGFWHSTCEREASILSFDGSMYMKIVIPNIMHTE
AEDVSLRFMSQRAFGLLMAATSRESADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEVL
YAGQKLNDNEWHSVRVVRRGKNFKLIVDDDMAEGQMAGDHTRLEFSNVETGILTEKRFVS
SAPSPFIGHLQSLKFNGLQYIDMCKNGDIDFCELNARFGMRFIVADPVTFKTKGSYLGLA
TLQAYTTMHLFFQFKTTSPDGFIIFNSGDGSDFIAVELVKGFIHYVFDLGNGPSLLKGNS
DNPLNDNQWHNVVITRDAANTHTLKVDTKSVTQNVNGAKNLDLKGDLFVGGLGPNMYQNL
PKLVVSREGFQGCLASVDLNGRLPDLINDALFRSGQIERGCEVGFTKADLQGPSTTCQED
SCANMGVCIQQWENFTCDCSMTSYTGTHCNDPGTNYIFGKGGGLITYTWPNNERPSTRTD
RLAVGFSTTIKDGILVRIDSAPRLGDYIMLHIEQGKVGVTFNIGTVDISVKELTTMVNDG
NYHLVRFTRNGGNATLQVDNWPVNEHFPSGNSDIERYQMANKKIPFKYTRPVEDWIQEKG
RQLTIFNTQATISIGGNDRKRPYQGQLSGLYYNGLKVLKMAAEGHPNIKVNGSVRLVGDV
PTSRGATRTTTSVPPEMSTTFIETTTTLSTTTTRKQRSPPTIQTTDDIVSSAECSSDDED
LEECDSGHTGGELVIPILVEDPIDIPSVSSRSPFIPFPPTLRPVLTIIDTTKESLAMATE
AGVPCLPDRGSDDCDGGDDGDNDDDDDDGDDGMVISGFGSGEAFDSSLPPTDDEDFYTTF
SLVTDKTLTTSAYEGGYKALAPKWEAKDLRPSKASEAGRTTSTSPLPDIRAMPPVAAPSD
TPPKLPAGKMDNREVKPPQPDIVLLPLPTSFDVDGTKPSGPFITSPMLRTVPAALPTVPG
VVRRVPPGVSEVIRESSSTTGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNY
ISNSAQTNGAVVKDKTPSGSAKGSASNKRPKDKDKEYYV
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccaagtggcctggttggacattttctcctgctgctaagtataatgctgggc
ttgagtgtcagcttggagttcactggctcagaagatcagtgggctcgctatctgagatgg
gacgccagctccaaaagtgacctgacatttcaattcaagacctcccaatcggaaggcatg
ctgctctacttcgacgatggtggattctgtgattttctactcctctctttgtctgagggc
aagctgcagctcctcgtcagcatcgactgtgcagagaccaccatcacctctgaaaagaga
gtcaacgacagccgttggcactttgccgccattaacaggcaaaatctgtggactggctta
gctgtagacggccagaccaagacgggagaagtccggccccaacggcagttcatgaagata
gttagcgaccttttcctgggaggacttccgggagacatccgcacatcggccatcaccttg
ccctctgcccgcgagcttccaccattcaaaggaattatcactaatcttagctatggaaat
aagtttcccacgttaatcaacagtcataaagttcgactggagatgatgggcctttgcacg
gagaatccctgtgagaatggtgggatctgctctctggcagatggagaaacctactgtgac
tgctccaaaactggatatgtaggtcgatactgcactgaagcagtcaggagaaaaccagaa
ctcgcacacctgaaggcagaacaaggtagaagcaaagcgagggaagagaacgtggccacc
ttccgaggctcggagttcttctgctacgacctgtcgcagaatcccattcagagcagcagc
gacgagatcacgctctccttcaagacctggcaacgcaacggtctcctcctccacacgggg
aaatccgcagactacgtgaacttggcgctgaaggacggcgccgtctccctggtcatcaat
ctgggttccggggccttcgaggccatcgtggagccggtcaatggaaaattcaacgacaac
tcctggcatgacatcaaagtgacacgcaacctgagacagcaatcaggcattggacacgct
atggtaaacaaactacattgtctggtgacgatctccgtcgacgggatcctcaccaccact
ggctacactcaggaagactacaccatgctgggctctgacgatttcttctatgtgggtggg
agccccagcaccgcggacctgccaggatctccagttagcaacaatttcatgggctgtctc
agagaggtggtatataagaacaatgacatccggctggagctctctcgcctggcccgaatt
gttgaccctaagatgaaactccatggtgatgtggtttttaagtgcgaaaatgttcccacg
cttgaccccatcaactttgagaaccctgactcctaccttgccatgccaaagtggaatacc
aaacgcgttggctcaatctcctttgacttccgaacctctgaacccaatgggctgattctc
tatacccacggtaagcctcaggaccgccgggatgcaaaaggccagaaaaacaacaaggtg
gacttctttgcagtggagttgctggatggagggctgtacctgcttttagacatgggatca
ggcactattaaagtcaaggctacccaggctaaagtcaacgatggcgcctggcaccacgtg
gacatccagagggacggtcgctccggcatcatctcggtaaacagccgcaggacaccattc
acagccagtggggaaaatgagatcttggacctggaaggagacctttatttgggtggcctg
cctgacagccgggtggatctggtgcgccccactgagctctggaccgccatgcttaactac
ggctacgtgggctgcattcgggatctgttcattgatggacgcagcaacgacataaaacaa
atagctcagtcacagaatgtgaccggcatcaagtcctcatgtagtaaggcgacagggaaa
cagtgcgacagcagcccctgcaagaacaacggggtgtgcaaggaaggctggaaccgattc
atctgtgattgtactgggtctggcttctggcatagcacctgtgaacgagaggcgtccatc
ctgtcttttgacggcagcatgtacatgaagatagtgatcccaaacatcatgcacacggag
gccgaggacgtctccctgcgcttcatgtcccagcgggcgttcggtctgctcatggccgcc
acgtcccgtgagtctgcagacactctgcggctcgagctcgacagcgggagagtcaaactg
acggtcaacctagactgtgtcaggataaactgtaacaccagcaaaggccctgaggtcctt
tatgccggacaaaagctcaacgacaacgagtggcactcagtgcgagtggtccgccgtggt
aaaaacttcaaactcatagtggatgacgacatggccgaaggtcagatggcgggtgaccac
acccgtctggagtttagcaacgtggaaacaggcatcttgacagagaaacgttttgtttca
tcagcaccatcaccctttattggtcaccttcagagcctcaagttcaatggtttgcagtat
attgacatgtgcaagaacggagacatagacttttgcgaactcaacgcccgatttggcatg
cgcttcatcgtcgccgatcccgttaccttcaagacgaagggcagctacctgggcctagcc
acgctgcaggcatataccacaatgcacctgttctttcagttcaaaaccacctcacctgat
gggttcatcatctttaacagcggagatgggagcgacttcattgcagtggaactggtcaaa
gggtttatccactacgtgttcgatctggggaatggacccagcctgttgaaggggaacagt
gacaacccactgaatgataatcagtggcacaacgtggtcatcacgcgggatgctgccaac
acgcacacactcaaggtggacacaaaatcagtgactcagaatgtcaacggagcgaaaaac
ctcgaccttaaaggtgacctgttcgttggtggtttgggacccaacatgtatcagaatctc
cccaagctggtggtttctcgtgagggcttccagggctgcttggcctctgttgatctcaac
ggccgcctgccagacctcatcaatgatgcccttttccgcagcgggcagatcgagcgtggc
tgcgaagttggtttcaccaaagccgacctacaaggcccgagcaccacctgccaggaggac
tcgtgtgctaacatgggcgtgtgcatccagcagtgggagaactttacttgtgactgctcc
atgacgtcttacacggggacccactgcaacgatcctggcaccaactacatctttggcaag
ggtgggggcctaatcacctacacgtggcccaacaacgagaggccaagcacgcggacggac
cggctggcagtcggcttcagcaccaccatcaaagatggcattctggtccgcatagacagc
gccccacgcctgggggattacatcatgctccacattgagcaaggcaaagtgggcgtgaca
ttcaacattgggacagtggacatcagcgtcaaagaattaaccacaatggtaaacgatggc
aattaccatctggtccgattcaccaggaatgggggcaacgccaccctgcaggtggacaac
tggccggtcaatgagcactttccatcaggcaacagcgacattgagcgctatcaaatggca
aataagaaaatccctttcaaatatacccggccagtagaagactggattcaggaaaaaggc
cggcagttgaccatcttcaacacccaggctaccatctctattggcgggaatgaccgaaag
cggccctaccagggccagctctctggcctctattacaatgggctcaaggtgctcaaaatg
gccgctgaaggccaccccaacatcaaggtgaatggcagtgtgaggctggttggagatgtg
cccactagccggggtgcaacgcgcaccaccacatcagtgccaccagagatgtctaccacc
tttatagagaccaccaccaccctgtctaccacaaccaccagaaaacaacgctctccaccc
accattcagacgacagatgacattgtttcgtccgccgagtgctccagcgacgacgaggac
ctggaggagtgcgactccggacacacaggaggggaactagtcatccccattctagtcgag
gaccccatagacatcccttctgtatccagccgttcacccttcatccccttccccccaacc
ctccgccctgtcctcaccattatcgacaccaccaaagagtccttggccatggccactgag
gcgggggtaccttgcttgccggaccgaggcagcgatgattgtgatggtggtgatgatggt
gataatgatgatgatgatgatgatggtgatgatggcatggtgatttcggggtttggctct
ggcgaagctttcgactctagcctgcccccaactgacgatgaagatttttacaccaccttc
tccctggtaacagataagaccttgactacatcggcctatgaaggtggctacaaagctctc
gcacccaagtgggaggccaaggacttaaggcctagcaaagcctcagaggcaggtaggact
acatccacctcacctctgcctgacatccgggccatgccaccagtggcggccccctcggac
acaccgcccaagcttcccgcagggaaaatggacaatcgcgaggtaaaacccccgcagccg
gacatagtcctgctgcccctgcccacatcctttgatgtggacggcaccaagccaagtggt
cccttcatcacctcgcccatgcttcgcacagtacctgccgccttgcccacagtccctggt
gtggtgaggcgagtaccgccgggggtatcggaggtgatccgggaatcgagtagtaccacg
ggcatggttgtgggcattgtttcagctgcagccctctgcatcctcatcctcctctatgcc
atgtacaagtacaggaatagagacgagggttcctaccaggtggacgaaacacgcaactac
atcagcaattcagcacaaaccaatggtgcggtggtgaaggataaaacacccagtggcagc
gccaaaggcagcgccagtaacaagagaccaaaagacaaggacaaggaatattatgtatag
DBGET
integrated database retrieval system
