Nothobranchius furzeri (turquoise killifish): 107378228
Help
Entry
107378228 CDS
T05163
Name
(RefSeq) thrombomodulin-like
KO
K03907
thrombomodulin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nfu04090
]
107378228
00535 Proteoglycans [BR:
nfu00535
]
107378228
04091 Lectins [BR:
nfu04091
]
107378228
CD molecules [BR:
nfu04090
]
Proteins
107378228
Proteoglycans [BR:
nfu00535
]
Cell surface proteoglycans
Others
107378228
Lectins [BR:
nfu04091
]
C-Type lectins
Group 14: Thrombomodulin
107378228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
Lectin_C
Tme5_EGF_like
EGF
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
107378228
NCBI-ProteinID:
XP_015803799
LinkDB
All DBs
Position
sgr04:73836124..73843504
Genome browser
AA seq
1067 aa
AA seq
DB search
MNRALILCGFWVWLRDATAEPVVRCTGRSAPGLCLFQNRVDFRGAEQSCRLTNGQLAENQ
TEVLVELPDGFDGRFWLRSPRGTHCTAVSMRSGANVTVQSVPCRNQLDGFVCRFDPSEVC
SPVQGIGHVTYTTSFVTPNFAVVDSDSFPPGTVAEEVWSGGPYPDSKQLCHGRWHRAPWF
CEVLLGGCEHECDHLCTCPVTHALHPNNFSCVARAPATPAPGHQIQCRSGFEPSLDGTRC
VDVDECAEEEDSCTEEGEECVNTDGGYECTCMEGFEEEDGACVNASICLLCEHSNCSRVS
GEFRCVCRDGYRVSPRDPTRCDQYCPERVCRAVCHRDPDLEERDMQQCTCPDGYIVDLVN
RTADCVDIDECEQQMCDHLCENTFGSYRCACHRGFRLERGDRCVPLEEKGEKGEEENRLP
PSPNESPEPLRPALPSYIKAGSVLGITVFLVLCAAGLGCLVRTMMRRCGRLDLTSIRHPD
LDIFYLQQVTTETYKRLSFDKQSKSDMRLQAGRSHQNLIRPRIRMDMGTWTLLVLLLGPV
GALTPHSGYCIGKGCFAWFRVPSDFRTAQSHCQDLGGHLMTVRTSVSNDVLSVLVGNVTG
SFWIGLHRPSGCPEPAAKLSGFQWVTADSESDFRNWLQNFTSSCSVERCVSVNGQDGFRW
RPTRCGRSTAGFLCEFGSTEQCQAQAVGPGESVSYMIPYGFRVDDLPMVPLGSTATRFPS
GTRSICSSAGWLPAPWSCEISVGGCEYRCAPGPDNDPVCVCPPGRTINPGNKVSCESSGL
GDPCAERRCQQICFMDGACGCEHGFRLAEDGTSCVDFNECTNERQCPGENFMCVNTQLRY
KCVCQVGFTSRRGLCVDRDECVSAPCEHECVNTPGSYRCLCYEGYVVDKASPDRCKLFCG
KDECPAVCDPNDGRQCYCPEGYVAEERPDGTFCLEIDECAFSYCDQGCVNTFGGYVCSCD
PGFKLVEEYRCVKTDEEGPEEGAPTPDPTSLNEEPDPTHRPSAITPGGLVGIIVCVVVLI
TLLVFAAHLGLRQRGRKSSSASGPLRAAGEDSHSLQRVRTHSHVDSF
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagctctgatcctgtgcggattctgggtctggctgcgggacgcgactgcggag
ccggtggttcggtgcaccgggaggagcgctccgggtctctgcctcttccagaaccgtgtg
gactttcggggggcggagcagtcgtgcaggctcacgaacggacagctggctgaaaaccag
acggaggtgctggtggagctgccagacgggttcgacgggaggttctggctgcgcagtccc
cgaggcacgcactgcaccgccgtgtccatgaggagcggggccaacgtgacagtccagtcg
gtaccgtgccggaaccaactggacggatttgtttgccggtttgatccctctgaggtttgc
agtcccgtgcaggggatcgggcacgtcacgtacacgacctctttcgtgaccccgaacttt
gcggtggtggactcggactccttcccaccgggtaccgtggcggaggaggtctggtccgga
ggcccctacccggactctaaacagctgtgccacggccggtggcaccgggccccctggttc
tgtgaggttctgctcggcggctgcgagcacgaatgcgaccatctctgtacctgccctgtc
acgcacgcgctgcatcccaacaatttctcctgcgtggcgcgcgctcccgccacccccgcg
ccgggtcaccagatccagtgcagaagcggattcgaaccgtcgctggacggcacgcgctgc
gtggacgtggatgagtgcgcggaggaggaggactcgtgcacggaggagggtgaggaatgc
gtgaacactgatggaggctacgagtgcacgtgcatggagggcttcgaggaagaggacggc
gcgtgcgtgaacgcttccatctgcctgctgtgtgaacactccaactgttctcgggtcagc
ggggagttccggtgcgtgtgccgggacgggtaccgggtgtcccccagagatccgacccgg
tgcgaccagtactgcccagagagggtgtgccgggcggtctgccaccgggacccggacctg
gaggagcgggacatgcagcagtgcacgtgccctgacgggtacatcgtggacctggtgaac
cggaccgcggactgtgtggacatcgatgaatgcgagcagcagatgtgcgaccacctgtgt
gagaacactttcggtagctacaggtgtgcgtgtcaccgggggttccggttggagaggggg
gacaggtgtgtccccctggaggagaagggggagaagggggaggaggagaaccgcctccct
ccttctccaaacgaatcacccgaacccctcagacccgccctgccctcttacatcaaggcc
ggcagcgtcctgggcatcaccgtgttcctggttctgtgcgcggccgggctgggctgcctg
gtccgaaccatgatgaggcgctgcggccgcctggacctgacctccatcagacacccggat
ctggacatcttctacctgcagcaggtgacaacagagacctacaagaggctgtcatttgat
aaacaatcaaagagcgacatgagactccaagcaggcagatcccaccagaacctgatcagg
ccgaggatccggatggacatggggacgtggaccctgctggtcctgctgctgggaccagtc
ggagctctgacgcctcacagtggctactgcatcggtaaagggtgcttcgcctggttccga
gttccgagcgacttcagaaccgcacagagtcactgccaagatctggggggacacttgatg
acggtccgcacctcggtgtcaaacgacgttctgtccgtcctggtgggaaacgtaaccggg
agcttctggatcggtctgcatcgacccagcggctgtccggaaccggctgcgaagctcagc
gggttccagtgggtcaccgcagactccgagagcgacttcaggaactggctgcagaacttt
accagcagctgctctgtggagcgctgcgtgtccgttaacgggcaggacgggttccggtgg
agaccgacacggtgcggccggagcaccgccgggttcctctgtgagttcggctccacagag
cagtgccaggcccaagctgtcgggccgggggagtccgtctcctacatgattccctacgga
ttcagggtggacgatcttccgatggttccgcttggaagtaccgcgacccgcttcccgtcc
gggaccaggtccatctgctcctcggccgggtggcttcctgcgccgtggagctgcgagata
agcgtgggtggctgtgagtaccggtgcgctcccgggcctgacaacgacccggtctgcgtc
tgccctccgggccgaaccatcaacccgggcaacaaggtgtcgtgcgagtcgtcgggactg
ggagacccgtgcgccgagcggcgatgccagcagatctgcttcatggacggcgcgtgcggg
tgcgagcacggcttcaggctggcggaggacggcacgtcgtgcgtggacttcaacgagtgc
acgaacgagcgtcagtgtcccggagagaactttatgtgcgtgaacacgcagctcagatat
aagtgcgtgtgccaggttgggttcacgagcagacgcggactgtgcgtagacagggacgag
tgcgtgtccgcgccatgcgagcacgagtgcgtgaacacacctggcagctacaggtgcctc
tgctatgaaggatacgtggtggacaaagcgtctccggataggtgcaaactgttctgcggg
aaggacgagtgtcccgccgtctgcgacccgaacgacgggcgccagtgctactgcccggaa
gggtacgtggcggaggagaggcccgacggaaccttctgtctggaaatagacgagtgtgcg
ttctcctactgcgaccaaggatgcgtaaacacgttcggtgggtacgtgtgctcctgcgac
cccgggttcaaactggtggaggagtacaggtgcgtaaaaaccgatgaggagggcccagaa
gagggggccccaactcctgacccaaccagcctcaacgaggagcctgatccaacacaccgc
ccctctgccattactcccggaggtctagtgggcatcatcgtgtgcgtggtggtcctcatc
acgctgctggtgttcgcagctcacctgggactcaggcagaggggcaggaagagcagcagc
gcctcggggcccctccgggctgctggggaggacagtcacagtttacagagggtcaggaca
cacagccacgtggacagcttctaa
DBGET
integrated database retrieval system
