Nothobranchius furzeri (turquoise killifish): 107378462
Help
Entry
107378462 CDS
T05163
Symbol
cntnap1
Name
(RefSeq) contactin-associated protein 1
KO
K07379
contactin associated protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107378462 (cntnap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
107378462 (cntnap1)
Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
107378462 (cntnap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
107378462
NCBI-ProteinID:
XP_015804164
UniProt:
A0A1A8TXM8
LinkDB
All DBs
Position
sgr05:complement(7534372..7554752)
Genome browser
AA seq
1308 aa
AA seq
DB search
MTCKILGMCLLFWGVQRCSSRECVDPLISGLSASNFWASSRYNFLYSANFAKLYGSSGWS
PSTSDRQPWLQINLGRKYRLLAIATQGTFNSYDWVTKYTLLYGDRPDSWTPYIMKGGNST
LPGNWNYYQVKRNVFHYAFTAKHIRLLPLEWNTENGGKIGVRLELFGCAYDSYVLQYNGD
DAVVYMFPEKRSRTLHDHIAINFKTLEQDGLLLHSEGIQGDLFTLELKKGRLYLHISLGS
SIVHKVDGRITLTAGSLLDNLHWHYVTIKRYGRQVNFTVDSQTVTAICNGEFTHLDLDTQ
MYVGGVIEKNMPHLPTTPNFRGCLENVFINGINVIGKAKNEEPDIRIPRNKKMHYACRDI
LLKPMTFAGPNNFLQVPGFFGKPRMFVKFKFRSWDYTGLLMFTRFADNLGALELGLSEGQ
INVTIFQTGKKKIQFAAGYRLNDGYWHSVDLAARDNLLTLTIDEEEGSPLKITNPFSIRT
SDRYFFGGCPKTNNTVFKCETKLNRFHGCMQHIFIDNEQLDIDIILQRQWARYEELLLGT
CGITDRCTPNPCEHEGRCIQSWDDFICLCENTGYKGEVCHMSVYKESCEAYRLSGKYWSG
NYTIDPDLSGPLKPFEVYCKMKSYKSWTVIMHDQVEGTKVTGSSIDQPYIVNVNYWNASW
DEVTALANTSMYCEQWIDYSCYKSRLLNTPNGRPFGYWIGRNNESHYYWGGTFREVQKCG
CHVNQTCVDPKFQCNCDADYRQWFSDKGYLDFRDHLPVRRVVVGDTNRTGSEARVTVGPL
RCHGDKNIWNTIAFTKPTYITFPTFQPGTTADISFHFKTYRDHGVFLENSDEQLRNFIRI
EMNTTHNLAFIFMVGDGILNVTLHSPVPLNDNEWHFVQAELNVKVARIKVDYQPWAVKRL
PGQTFVTMKFTHPLLVGAANRTLRPFLGCLRGLRMNGVPLDLEGKVNEEQGIRRNCTGQC
LNATIPCRNSGQCIEGYASYTCDCNNTAFDGFYCHKDIGAYFEIGSWLKYNIRKKPTSNE
AVWANWIDPHYDNFSLGYNDTADDIEFSFSTVHAPAVLLYISSFVQDYIAVILKTDGSVD
LRYKLGLVTHKYQLTNRNLADGYPHYVNITRHNRTIKTQVDYMEPIVEKITLVEDARFDS
PKSMFLGRVMEVGDIDYEIQRHNAPGFIGCISGVRYNVYAPLKTLFRPNETDLPVTTQGY
VSESNCGAFPPVLGYVPWEVDPWFTSIEYFYMHDDIGLLWIAVIVLVAFVLLLGGLYTIY
IYAYQQKGSYHTNEPKNLESPSSSRPLTETLRREKKSIQEIEEEVRSG
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcaaaatattaggcatgtgcctcttgttttggggggttcaacgttgctcatca
cgagaatgtgttgatccactcatctcggggttgtctgcctccaacttctgggcctcttcc
agatataacttcctgtactctgccaattttgccaaactctatggcagcagtggctggtcc
ccgtccaccagcgacagacagccatggctgcagattaatctgggcaggaagtacagactg
ctggcgatagcaactcaggggaccttcaactcctatgactgggtcaccaagtacacactt
ctctatggagaccgaccggactcctggacgccatacatcatgaaaggagggaactctacg
ctgcctggtaactggaattattatcaggtgaagaggaatgtcttccattatgcctttact
gctaaacacattcgtctgctgcctctggagtggaacacggagaatggaggaaagattgga
gtcaggctggagctctttggctgcgcttatgactcctatgtgctgcagtacaatggagac
gatgcagtggtctacatgttcccagaaaaacggtcccgtactctgcacgaccacatcgcc
ataaacttcaagactctggagcaggatggtctgttgttacacagtgaggggattcaagga
gaccttttcaccctggagctaaagaaaggtcgtctttacctgcacatcagccttggaagc
agcattgtgcacaaagtcgatggccgaatcactctgactgcaggaagcctgcttgataat
ctacactggcactatgtcactatcaagcgctacggtagacaggtgaacttcaccgtggac
agtcagacagtgacggccatttgcaatggagaatttactcacctggatctagatactcag
atgtatgtgggaggtgtaattgagaaaaacatgcctcacctaccgaccacacctaatttc
cgaggatgtctggagaacgtcttcatcaatggcatcaacgttattggcaaagccaagaat
gaagaacccgacatccgtattcctcggaataaaaagatgcattatgcctgccgagacatt
ctactcaaaccaatgacttttgctggacccaacaacttcttacaagtaccggggttcttc
ggaaagcctcgcatgtttgttaagtttaagttccgctcatgggactacaccgggctgctg
atgttcacacgtttcgctgataacctcggcgcccttgagctgggtctgagtgagggtcag
atcaatgtgaccatttttcaaacaggaaaaaagaagattcagtttgctgcaggatacagg
ctgaacgatggttactggcattcagtggatttagcagccagagacaacctgctgactctt
accattgatgaggaagagggctctccgctgaagatcaccaacccattctctatccgaaca
agtgatcgctacttttttgggggttgtccaaaaaccaataacacagttttcaagtgtgag
actaaactgaatcgcttccatggctgcatgcagcatattttcatagacaacgaacagctg
gatatcgacataattctgcagcgacagtgggcacgatacgaggagctgctgttgggtacc
tgtgggatcactgacagatgtactccaaatccatgtgaacacgagggcagatgcattcag
tcctgggatgattttatctgtctgtgtgagaatacaggctataaaggagaagtgtgtcac
atgtcggtttataaagaatcgtgtgaagcctacagactgagtggcaagtactggtccgga
aactacaccatcgatcctgatctcagtgggccgctcaaaccatttgaagtgtactgcaaa
atgaagtcctacaaatcttggacagtgatcatgcacgatcaagtggaaggcaccaaggta
actgggagctcaattgaccaaccatacatcgttaatgtcaactactggaacgcctcctgg
gatgaagtcaccgctctggcaaacacctccatgtattgtgagcagtggattgactactcc
tgctacaagtctcgtctcctcaacacccccaatggaagaccctttggttattggattggt
cgcaacaatgaaagccactattactggggtgggactttcagagaagttcaaaaatgtggc
tgtcatgtcaaccagacctgtgtggaccccaagtttcagtgcaactgtgatgctgactac
agacaatggttttcagataaaggttacttggacttcagggaccatctacctgtaaggagg
gtagtggtcggggacaccaacaggactggttcagaagcacgtgtcacagttgggcctctc
cgatgccatggcgacaaaaacatctggaacacaatcgccttcaccaagcccacctacatc
acgttccccactttccaacccggaactactgctgacatctccttccacttcaaaacatac
cgagaccatggtgtctttctggaaaactcagatgaacaactcagaaattttataagaata
gaaatgaacaccacccacaatcttgcgtttatatttatggttggcgatggcatcctcaat
gtgacccttcactcccccgtgccactcaatgacaatgagtggcattttgtccaggctgag
cttaacgtgaaggtggccaggatcaaagttgattatcagccttgggctgtcaaacgttta
ccaggccaaacatttgtcaccatgaagtttacacatcctcttctcgtaggtgcagccaac
cgcaccctcagacctttcttagggtgcctgcgagggttacgaatgaacggtgttccactt
gatttagaagggaaagtaaatgaggaacagggtataaggaggaactgcacaggacagtgt
ctcaacgccaccataccatgtcgaaacagcggccagtgtattgaaggatatgcttcttat
acttgtgactgtaataatacggcctttgatggtttctactgccataaagacattggagct
tactttgagattgggtcgtggctaaagtacaacatacgaaaaaagcccacatcaaacgag
gctgtatgggcaaactggattgacccgcactacgacaacttcagtcttggctataacgac
acggcagatgacatcgagttcagtttcagcactgttcacgctcctgctgtgctactctac
atcagctcatttgttcaagactacatcgctgttatcctcaaaactgatggtagtgttgat
ctgaggtataagctggggcttgtaacacacaagtatcagctaactaaccggaacctggca
gatggatatcctcactatgtgaacataaccagacacaacagaaccatcaaaacccaggtg
gattacatggaacctatagttgagaagataacgttggtggaggatgccaggtttgactcg
ccaaagtccatgttccttggcagagtgatggaggttggtgatattgactacgaaatccag
agacacaatgctcctggcttcatcggctgcatatctggagtgagatataacgtctatgcc
cctctgaaaaccctcttccgcccaaatgaaacagatcttcccgtaacaacacagggatac
gtctcagagtccaactgtggggcgtttcctcctgtcttaggttacgtgccttgggaagtt
gacccctggtttaccagcatagagtatttttatatgcacgatgacataggtctgctttgg
atagcagttattgtcctcgtggcgtttgtgctgctccttggaggcctgtacaccatctat
atttatgcttaccagcaaaaaggaagttaccacaccaatgaacccaaaaacctggagtct
cccagcagctctaggccactgaccgagaccttgaggagagaaaaaaagagcattcaagaa
attgaagaggaagtcaggagcggctaa
DBGET
integrated database retrieval system
