Nothobranchius furzeri (turquoise killifish): 107378896
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Entry
107378896 CDS
T05163
Name
(RefSeq) collagen alpha-6(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107378896
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107378896
09142 Cell motility
04820 Cytoskeleton in muscle cells
107378896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107378896
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107378896
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107378896
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107378896
Hyaluronan
Extracellular matrix or blood plasma proteins
107378896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
107378896
NCBI-ProteinID:
XP_015804853
LinkDB
All DBs
Position
sgr05:45648297..45686673
Genome browser
AA seq
2252 aa
AA seq
DB search
MRRRSSFLILTSTVCFFFVSAQKSECEKATVGDIVFLVDSSTSITPQSFQEVRSFLYNIT
KNLDIGSKKVRVGLAQYSDDPHQEFLLKEHVDKKSLLAAIEQFSQQKGGTETGKAIDFIR
ERYFTEEAGSRAKQRVPQIAVVITDGQSFDDVDKPAIELRRHGVVVFAVGVEDYNQKQLE
RIANWPPSQYTRTTASFQELQSLTDQLLETVCFSLEEQRKGKAIKTFHVDCKGANMADIV
FIVDDSRSITPNNFHLMRHFLYSMISSLDVNPKRVRVGIVTYSDYPTAQAYLNTFQDKAE
VLQFITTLPRRGGGTNTGAALKFTLESVFIEEKGSRKGVQKVAIVITDNGSHNNVSAEAI
GLRRASVKVFAVGIQVANTDDLHDMASHPTSRHVFTVDSFAQLKPLTETLQESLCSSITN
SAIRNSEITQDAKQACEQKDEADIFFLIDDSGSIEQEDFTDMKKFVIEFLKTFRIGPHHV
RLGLVKYSDEPTEEFDLGVYSSALEIEKAVESIFHEGGGTKSGLALSFMGSYFERAAASR
QVQQYLIVITDGESSDEVKDPAENLRNKGISVFAIGIKEANATQLNEISGNSKRTFSVSN
FDALKFISDDVIREICAPEVCKDVPSDIIFLTESSERISEMDFKKTKEFMKSVISKSMIG
PNEVHVGVMQFSTKHHLEFPLSNSYSKEEILRAIDDMKQMKLDTHTGKAITEVSNYFDES
NGGRPSLRQNLVVITYSKAKDEVRGPAEALRAKGVVIYSIGLMDANLSQLQQISGSSDTV
FNQESTDALNELESVLALKFCDPQRDCKKVEKADIIFLVDGSGSIDDQEFKSMQTFMYSV
VNQTTVGQELTRFGVILYSDTAEIQFRLNAYNSRAEVLKAINGLVPPLKNTYTSKALKYS
LEFFNDEHGGRRKLKIPQIIMVITDGDAQDYYGLKASSDALRANNINVISIGVEGAIKEQ
LDTMAGGDQSKVFFVKDFKELETLYKNMSDVICQTTKPACEKADLVFLLDNSGSISSDNY
NTIKNFTTDVVNSFNVSENEFRVGLAAFSNSPKHEFYLNEYSSNKAVVDHVMKLTYEGGN
TYISKALVFIKEYFQTSRGSRINTPKTLVLITDGNSQDDVEDAANELRDMGIQILAVAIG
DVYDLQLLQITGDPRKLFTVVNFDSLANIKKKVVEAICPEPSTEPSVCSIDIAIGFDIST
RGGPGVTLNSYVRHLKEIAQSISMVEDLCCTSPLHTNISFSVVDINGHALYDNKFEAYSE
QVVNKFLNISWSQPTLFNLAQLNYFGDWFRDKSTAQVKVLVIFSDGLDEDVMKLRQGSEQ
LRESGVSALLTVALNGAEPSQLQMVEFGRGSNYQLPLTIHTPSIKGILLQQISAVADRVC
CNVACKCSGHQGIPGTPGVLGTKGSPGLKGHPGFPGDEGYHGPRGPPGPNGVQGSAGCPG
FRGAKGSHSYSGEKGEEGEEGLDGVNGEQGQTGKDGIPGAKGDPGKSGKPGTRGEAGLKG
ERGLRGDSGEPGTDNTSPGPRGDPGNPGPPGTPGRDGLPGQDGDPGFQGRDGRRGPGGDP
GLPGEKGARGPPGAAGASGPRGPKGKHGEPGPKGMLGLPGPQGGPGRVGRPGQTGNTGAN
GQKGQPGEEGVKGSRGPPGPGNDGEDGLGPDGPKGAKGVPGFPGYPGQPGELGQGGTKGY
PGRKGNRGRGGNSGGSGQPGLPGDPGYPGHKGHRGPPGRMEKTECELITFIRDSCVCSDG
RSQCPAYPTELVFSLDLSEDVSSDDFDKQRQAVLSLLESISIAESNCPMGARVAVVEFSR
YTRNLIRFQEHHRKKQLIEAVEKIAYERTTDRRHLGAAMLSVGRNIFKRARAGMMIRKVA
VFFSNGPSQDPDDMIAAMMEYSARNIVPVVISLKKAPRVSQVMEVDDSGRSIFVMLRRQQ
DLMKVMNCAICYDPCRRSEECSFIQDPVPLQQVDTDLVMVIDGSREMQADQIVEAQQLMG
SVVEQLAQSPQDLRQFGAFSPLGMTGLDSALQEVLMRPIRPHRKKALLVFVADQISFSDW
AMSRKAKCEGVAVFVVTVGNRYNRTQVEELASLPVQQHLIHVDQLEANEREYVQRFFRVF
LSTLNKGLNSYPPASLKPFCSRLKDPNDFISRQSSQSDDPLSDVLVQTEHEVSTDVLSQE
NGQQSVPGSNFNDNNSPRSGMLYGRNITSTPLISFVSKDVCLLNRNSGQCRKYTIKWFYD
SKQSRCFRFRYGGCGGNRNRFSTQRECEATCL
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagatcaagcttcctcatcctcacctccacagtttgtttcttcttcgtttct
gcccagaaatcagaatgtgaaaaggccacagtgggcgacatcgtcttcctggttgatagc
tccaccagcatcacccctcagagcttccaggaagtccgttcatttctctacaacatcacc
aagaacctcgacatcggttccaagaaagttcgcgtcggcttagctcagtacagcgatgac
ccacaccaggaattcctgctgaaggagcatgtagacaagaaatctctgttggctgcaata
gagcagttttcccaacagaaaggcggcacagagacaggtaaggcgatcgatttcattcga
gagcgttacttcaccgaagaggcggggagcagagccaaacaacgggtgcctcagattgcc
gtggtcatcacggacgggcagtcctttgatgatgtggacaaacctgctattgagctccga
cggcacggggttgtcgtgttcgctgttggggtggaagactacaatcagaagcagctggag
agaattgctaactggcctccaagtcagtacaccagaaccactgccagcttccaggagctg
cagagtctgactgaccagctactggaaaccgtgtgcttctccctggaagagcagaggaaa
ggtaaagccatcaaaacatttcatgtagactgcaaaggagccaacatggccgacattgta
ttcattgttgatgattcgaggagcatcacaccaaacaacttccatctgatgcgtcatttc
ctttactcaatgatcagcagccttgacgtcaatccaaaacgagttcgcgtgggcattgtt
acctacagtgactaccctacagctcaggcctacctcaacactttccaggacaaggcagaa
gttctgcagttcatcacaactctgcctcgcagaggaggtgggaccaacactggagccgcc
ctaaaatttactctggagtctgttttcattgaggagaagggcagcagaaagggggtccag
aaggtagccatagtgatcacagataatgggtcacacaacaatgtgagcgcagaggccatt
ggtctccggagagcttcggtcaaagtttttgctgtaggaatccaagttgctaacacagat
gatctgcatgacatggcgtctcaccccacctccagacacgtgttcaccgtggacagcttc
gctcagctgaaacctctgacggaaaccctgcaggaaagcctgtgcagttctatcacaaac
agtgcaatccgtaactctgaaatcacgcaggacgccaaacaagcatgtgaacaaaaagat
gaagcagatatcttcttcctcatcgatgactcaggaagcatcgagcaggaagacttcaca
gatatgaagaagtttgttatcgagtttctgaaaaccttccgtattgggccacatcatgtt
cgcctggggctggtgaaatactcagatgaacccactgaagagtttgacctgggtgtgtac
tcatcagctttggagatagagaaagctgtggagagcattttccatgaaggaggtggaacc
aaatctgggttggcgctgtccttcatgggatcttattttgagagagcagcggcttctcgt
caggtccaacagtatttgatcgtcatcacagatggagagtcctcagatgaagtcaaagat
ccagctgaaaatcttagaaataagggcatctctgtgttcgccattgggatcaaggaagca
aacgcaactcaactgaatgagatatctgggaactccaagaggacattctctgtcagtaac
tttgatgcccttaagttcatcagtgatgatgtcataagagaaatctgcgctcctgaggtt
tgtaaagacgttcccagtgacataatcttcctgactgaaagctcagagagaatctcggag
atggacttcaagaaaacgaaagaattcatgaaatctgtcataagcaagtccatgatcggg
ccaaatgaggtgcatgttggtgtaatgcagtttagcaccaaacatcatttggagtttcct
ctcagcaactcttacagtaaagaagaaatcctgagagctattgatgacatgaagcagatg
aagctagacactcacacaggaaaagctatcacagaggtttcaaattattttgatgaatcc
aatggagggcgtcccagtctgaggcagaacctggtggtgataacctacagtaaggctaaa
gatgaggtcagaggtcctgctgaagctctcagggccaaaggagtggttatctactccatc
ggactgatggatgccaacctttcccagcttcagcaaatcagtggttcatctgacacagtt
tttaaccaagaaagcactgatgcactaaatgaactagagagtgttctggccttaaagttc
tgtgatcctcaaagagattgtaagaaggtcgaaaaagctgatatcattttcctggtcgat
ggttctggaagcatagatgatcaagaattcaaaagtatgcagacgtttatgtactctgta
gtgaaccagaccacagttggtcaggagctgacccggtttggggtcatactctactctgac
actgcagaaatccagtttcgtctgaatgcctacaactccagagcagaagttcttaaagct
ataaatggtttggtgccaccgctcaaaaacacgtacacaagcaaggctttgaagtactcg
ttagagttctttaacgatgaacatggtggacgacgaaaactgaagattcctcagatcatt
atggtcatcacagacggtgatgcccaagactattacggtctgaaagcctcatctgatgcc
ctgcgagcaaataacatcaatgtcatcagtattggagtagagggggccataaaggagcag
ctggacaccatggctggaggggaccaatccaaagttttctttgtgaaggatttcaaagaa
ttagagactctgtacaagaacatgtcagatgtcatctgccaaaccactaaaccagcttgc
gaaaaggcagacctggtttttctgcttgataattccggcagcatcagctcagataattac
aataccatcaaaaacttcacgaccgacgtagtgaacagcttcaacgtcagtgagaatgaa
ttccgagttggacttgcagcgtttagtaattcccctaaacacgagttttatctcaatgag
tacagcagcaacaaagctgtggttgatcacgtaatgaagttgacgtatgagggtggaaac
acctacatcagcaaggccttggtgtttatcaaggagtactttcaaacatcacggggcagc
cgcatcaacacccccaaaacgctggtgctgatcacagatggaaactctcaagatgacgtg
gaggatgcagctaatgagctcagggacatgggcattcaaatactagctgttgccattgga
gatgtctatgacctgcagctccttcagatcactggagacccaagaaaactttttactgtg
gtgaactttgacagcttggccaacattaagaaaaaggttgttgaagccatctgcccagag
ccttctactgagccctctgtttgcagcattgatatcgccataggatttgatatttccaca
agaggaggtcccggtgtgacccttaacagttacgttagacatctcaaggagatcgcccag
tctatttctatggtggaggacctctgctgcaccagtccgctccacactaacatttccttc
agcgtggtggacatcaatggacacgctctgtatgacaacaagtttgaggcttacagtgaa
caagtagtgaacaaattcttgaacatttcatggtcacagcccactttattcaatttagct
caattgaactacttcggagactggttcagagacaagtccacagctcaagtaaaggtgctg
gtgatcttctcagatggacttgatgaagatgtgatgaaactaaggcagggatctgagcag
ctaagagagtctggggtcagtgctctgttgactgtggcactaaatggtgctgaaccctcc
cagcttcagatggtcgagttcggccgaggatccaactaccagcttcctcttactatccac
actccgagcatcaaaggcatcctccttcagcagattagtgctgtggcagatcgtgtctgc
tgtaatgttgcatgtaaatgttcaggacatcaaggcatacctggtactcctggcgtactt
gggacaaagggttctcctggactgaagggccacccaggatttccgggagatgaaggatac
cacgggcctcgaggacctccgggacctaatggagttcagggctctgctggatgtccagga
ttcagaggagcgaagggatctcatagctactcaggagagaagggcgaagaaggagaagaa
gggctggatggagtgaatggagaacagggacaaaccggaaaagatggaattccaggagct
aaaggagacccaggaaaatcagggaaaccaggtaccagaggggaggcggggctgaagggg
gagcgaggcctgagaggagattcgggcgaacccggaaccgacaacacaagtccaggaccc
cgcggggaccctggaaacccgggacctccgggcactccgggtcgagacgggttgccaggt
caggatggagatcccggattccagggtcgagatgggagaagaggccctggtggcgacccg
ggcttacctggagagaaaggagctcgaggacctccaggtgccgcgggtgcttctggtcca
cggggacccaaaggaaagcacggcgagccaggtccaaaggggatgcttggtttacctgga
cctcagggtggtccgggacgggtcggacgcccgggacaaactggaaacactggtgctaac
ggacagaagggccaaccaggagaggagggagtgaaggggtcccgaggaccgccaggaccc
ggaaatgatggagaagacggtttagggcctgacggacccaaaggtgcaaagggagttcct
ggttttcctggttatcctggtcagccgggtgaactgggtcaagggggaaccaaaggttat
ccgggtcggaaaggaaaccgaggtcgagggggaaactccggaggctcaggacagcccgga
ctgcctggagatccaggatatccgggacacaagggacaccgaggtcctcctggaagaatg
gaaaagacagagtgtgagctgatcaccttcattagagacagctgtgtttgttctgacggt
cgttcccagtgcccggcgtaccccaccgagctggtctttagtctggacctctcagaggat
gtgtcctcagatgattttgacaagcagcgccaagccgtactctccctgctggagagcatc
tccatcgcagagagcaactgtcccatgggtgctcgggtggccgtggtggaattcagcaga
tacaccaggaacctgatccgcttccaggagcatcacagaaagaaacagctgatagaagct
gtggagaaaattgcctatgagcgcacaacggaccgccgccacctaggggccgccatgctc
tcagtgggtcggaacatatttaaacgtgccagagcaggcatgatgataaggaaggtggcg
gtcttcttctccaacgggccgtctcaggacccggatgatatgattgcagccatgatggag
tacagcgctcggaacattgtcccagtggtgatttccctgaagaaagcacctagggtcagc
caagtgatggaggttgatgactcagggaggtccatcttcgtgatgctgaggaggcagcag
gacctgatgaaggtcatgaactgtgccatctgttacgatccctgcaggcgctcagaggaa
tgctccttcatccaggacccggtaccgcttcagcaggtggacacagacctcgtcatggtt
atagacggctccagggagatgcaggcagaccagattgtcgaagctcagcagctaatgggc
tctgtggtggagcagctggctcagagtccccaggacttgaggcagtttggcgccttctcg
ccgctaggaatgactggactggactcggccctgcaggaggttctgatgaggccgatccgg
ccacacaggaagaaggctctgctggtgttcgtggccgaccagatatccttcagcgactgg
gccatgtcccggaaggccaagtgtgagggcgtggctgtatttgtggtgacagtcggcaac
cgctacaaccggacccaggtggaggagctggccagtttgccggtccaacagcatctgatc
cacgtggaccagctggaggccaacgagcgggaatacgtgcagcgcttcttcagagtcttc
ctctccaccctgaacaagggtctgaactcgtatcctcctgcttcactgaagcccttctgc
agccgtctgaaggacccaaacgacttcatcagcagacagagttctcagtccgacgaccca
ctgagtgatgtgttggttcagacggagcatgaagtctccactgatgttctgagccaagaa
aacggccagcaatcagttccaggatccaactttaatgataataatagcccacgctctggg
atgctgtatggtcgaaacatcacatcgactccgctgatcagctttgtctccaaagatgtt
tgtcttctcaatagaaactctggccagtgcaggaagtacaccataaagtggttctatgac
agcaaacaatccagatgcttccgcttccggtacggtggctgtggaggaaacagaaaccgc
ttcagcacgcagagagagtgtgaggctacatgtctgtag
DBGET
integrated database retrieval system
