Nothobranchius furzeri (turquoise killifish): 107379435
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Entry
107379435 CDS
T05163
Name
(RefSeq) slit homolog 3 protein-like
KO
K06850
slit 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107379435
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
107379435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRR_9
Laminin_G_1
hEGF
LRRNT
LRRCT
JAG1-like_EGF2
DL-JAG_EGF-like
EGF_3
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
107379435
NCBI-ProteinID:
XP_015805671
LinkDB
All DBs
Position
sgr01:complement(43874215..44203996)
Genome browser
AA seq
1537 aa
AA seq
DB search
MRPAEEQRVGLHRIWALLFAVIVCAASAVGCPHKCSCSGSHVDCQGLALKTVPKGIPRNA
ERLDLNRNNITRINKVDFSGLKNLRILHLEDNQITVIERGAFQDLRLLERLRLNRNKLQF
LPELLFQSNPKLGRVDLSENQIQAVPRKAFRGITNVKNLQLDSNHISCIEDGAFRALRDL
EILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRARRGMAPFTQCM
SPAHMRALNVPDVLKKDFICNGPAEMEPRTCVTQVTVCPPSCSCNNNIVDCRRKGLAEIP
ANLPEGIVEIRLEQNQIKSVPAGAFTAYKKLKRIDLSKNQISDIAADAFSGLRSLTSLVL
YGNKITELPKGIFDGLVSLQLLLLNANKINCLRVNAFQDLQNLNLLSLYDNKMQTISKGL
FTPLRSIKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKK
FRCTGQEDYRSRLSGECFQDLVCPEKCRCEGTVVDCSNLKLTRLPPHIPEHTTDLRLNDN
EIAILEATGTFKKLPNLRKINLSNNKLKDVREGAFDGASGVLELLLTGNKLTGLQGRMFK
GLSGLKTLMLRSNQISCIDNSTFTGLSSVRLLSLYDNRIASIAPGAFSTLHSLSTINLLS
NPYVCDCHLAWLGQWLKKTRVVSGNPRCQKPAFLKEIPIQDVATPDFTCDGAEDNGCLPA
SGCPDACTCSDGVVRCSNRALHSLPKGIPKDTTELYLEGNTLTSVPKELAALKQLSLVDL
SNNSISTLAPYTFSNMTQLATLILSYNQIRCIPVHAFDGLKSLRLLTLHGNDLSTIPEGA
FNHLTSLSHLALGANPLYCNCDLRWLSQWVKAGFKEPGIARCAGPADMADRLLLTTPLNR
FQCKAPADISLVSKCAPCLAAPCRNNGTCVSNDAGTYHCTCPYGFKGQDCEIPINACVSA
PCYNGGTCHIQPGQEDLFSCVCPPGFEGKRCEMNPDDCEDNDCENNSTCVDGINNYTCVC
PPNYTGDLCDEVIDPCLSGFDPCQHDSKCVHVGRNYRCECLPGYVGQHCEQDYNDCLENK
CQHGAECVDAVNGYTCVCKEGFSGLFCENPPPMILLQTSPCDQSDCQNSAQCLVVAGEPI
CRCIPGFYGNKCDKISTVHFLGRDGYVELPGTKLRTTALISLQVATEKDNGILLYKEDHD
PLALELYQGHIRLIYDIANYPPTTVYSVESVNDGLFHTVELLIQNRSLSLVVDNGAPKSL
GKLARQPSMDHNTQLYIGGVPPQVVASGLRPGPERSPQTFDGCINNVRINGDTQDLSFRS
TGRGQSQGVESKGDGILVGCHSCSVCAQGTCREAGEMGVTCECPPGRSGALCDETTAPNP
CQNNRCVHGLCVAKGQSYSCQCNEGYQGQYCDKEQEPPACRGHSCGRGECHVSEAGEPVC
KCQPGYTGPTCDTEPTCQGEMVREQLKRHQALRTCTSTSKIPRVDCPRSCQASAPPGVCC
GVTKTRRRKVVFRCTDGTSYSEEMETTLECGCSKCPL
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccagccgaggagcagcgcgtcgggcttcaccggatctgggctctgcttttcgct
gtgatcgtgtgcgctgcgtcggcggttggatgcccacacaagtgtagctgctccggctcg
catgtggactgccagggtctggctctgaagaccgtgcctaaaggaataccgaggaatgcc
gagcgcctggatctgaacagaaacaacatcactagaatcaataaagtggacttctctggc
ctcaagaacctccggattcttcatctggaggacaaccaaatcactgttatcgagcgaggg
gccttccaggacctgcggctgctggaaagactccgtctcaacagaaacaaactccagttt
ctcccagaacttctcttccagtccaaccccaaactgggacgagtagatctgagtgaaaac
cagattcaggcagtgccacggaaagccttcagaggaatcaccaacgtaaaaaatctgcaa
ctggacagcaaccacatcagctgcattgaagatggagctttccgagcgctgcgcgatctg
gaaattctcaccctcaacaacaacaatatcacccttatccccctgtccagcttcaaccac
atgcccaagctgcggacactgcgtctgcactccaacaacctccattgtgactgccatctg
tcttggctctctgattggctcagagccagacggggaatggcccccttcacccagtgcatg
tcacctgcccacatgagggctctcaatgtcccagatgtgctgaagaaggactttatctgc
aatggtcctgcagagatggagccgaggacttgtgtgacccaggtcaccgtgtgtccgccc
agctgcagctgtaacaacaatattgtggactgtcgtcgcaaaggccttgctgaaatacca
gcaaacctcccagagggcatcgttgagattcgtctggagcagaaccagataaaaagtgtc
ccagcaggagccttcacagcctacaagaagctcaagagaattgacttgagtaagaaccag
atttctgacatcgcggcagacgctttcagtggtcttcgctcactcacctctctggtcctg
tatggcaataagatcaccgagctgcctaaaggcatatttgatggactggtttccctgcag
cttctgttgctgaacgccaacaagattaactgtttgagagtcaacgcgttccaagaccta
cagaacctgaacctgctgtctttatacgacaacaagatgcagaccatcagtaaaggactc
ttcacgcctctgcgctccatcaagaccctccacctggcccagaatccctttatgtgtgac
tgtcacctcaagtggctggccgattacctgtttgacaacccgatcgagaccagcggggcc
cgctgcagccaccccagaaggctggccaacaaacgaatcagccaggtcaaaggcaagaag
ttcaggtgcacaggtcaggaggactatcgcagccggctgagtggggagtgttttcaggat
ctggtgtgtccggagaaatgtcgctgtgagggcacagtggtggactgctccaatctcaaa
ctgacccgactgcctccacacatccctgaacacaccactgacctgcggttaaatgacaat
gagattgccatcctggaggctacggggacattcaagaagcttcccaacctgaggaagatc
aacctgagcaacaataagctgaaggacgtccgtgaaggtgcatttgatggagcgagtgga
gttttagagctgctgctaacagggaacaagctaactggactgcagggacgcatgttcaaa
ggcctgagtggcctcaaaacactaatgctgcgaagcaaccagatcagctgcattgacaac
agcaccttcacaggtttgagctccgtacgtctgctgtcactctacgacaaccggatcgcc
agcatcgcccctggagccttctccaccctgcactccttatctaccattaaccttctgtcc
aacccatatgtgtgtgactgtcacttggcctggttgggtcagtggctgaagaagaccaga
gtggtgagcggaaaccctcgttgtcagaaaccagccttcctgaaggaaattcccatccag
gatgtggccaccccagacttcacatgtgatggtgccgaagataatggttgtcttcctgca
tctggttgtcctgatgcctgcacgtgctcagacggagtggtgcgctgcagcaacagagcg
ctgcactccctgcccaaaggcattcccaaggacaccactgagctatacctggagggtaat
accttgacatctgtgcccaaggagctggcagccctgaagcaactatcactggtggacctg
agcaacaacagcatcagcacattggctccatataccttcagcaacatgactcagctggcc
acactcatcctgagctataaccagatccgctgcatccctgttcatgcctttgatggactc
aagtcactccgtctgctaactctccatggtaatgacctgtcaaccatccccgaaggagcg
ttcaaccacctgacatctctgtctcacctggctctcggtgccaaccccctgtactgtaac
tgtgacttacgctggctctctcagtgggtcaaggctggcttcaaagagcctggtattgct
cgctgtgctggacctgccgacatggccgacagactgctgctcactacaccactcaacaga
tttcagtgtaaagctccagcagatatcagccttgtgtctaagtgtgccccctgtttggca
gcgccttgccggaacaatggcacctgtgtgtctaatgatgctgggacctaccactgcacc
tgtccatatgggttcaagggtcaggattgtgaaattcccatcaatgcatgtgtcagtgcc
ccatgttacaacggaggaacctgccacattcagcctggccaagaagacctcttcagctgt
gtgtgtccgcctggctttgaaggtaaacgttgtgagatgaatccagacgactgcgaagac
aacgactgtgagaacaactccacatgtgttgacgggatcaacaactacacctgcgtctgt
ccacccaactacacaggtgacttgtgtgatgaggtgatcgacccttgtcttagtggcttt
gacccatgtcagcacgactccaagtgcgtccatgttggccgcaattacagatgtgagtgt
ttaccaggatatgtgggccagcactgtgagcaggactataatgactgtttagagaataaa
tgtcagcatggagcagagtgtgtggacgctgtcaatggctatacttgtgtctgcaaagag
ggtttcagcgggctgttctgtgagaaccctccaccaatgatcctgctgcagaccagccca
tgtgaccaatcagactgccagaacagcgcccagtgcctggtggttgctggggagcccatc
tgtcgctgcatacctggtttctatggcaataaatgtgacaaaatctccactgttcacttc
ctgggtcgcgatgggtacgtggagctgccaggcaccaaactccgtacaacagctcttatc
tcactgcaggtggctacagaaaaggacaatggcattttattgtacaaggaggaccatgac
cccctagcgctggagctttaccaaggacacatacggcttatttatgacatcgccaactac
ccaccgaccacagtgtacagcgtcgagtcagttaacgacggacttttccacacagttgag
ctgttgattcagaaccgctcgctgagcctggtggtggataacggcgccccaaagagcctg
ggcaaactagcacgccagccctccatggaccacaacactcagctttacatagggggtgta
ccaccacaggtggtggcatcaggtctgcggccaggccctgagcgctcacctcagactttt
gatggctgcattaataatgtccggatcaacggagacactcaagacctgagttttagatca
acaggaagagggcagtcgcaaggagttgaaagcaagggtgatggcattcttgtaggatgt
cattcctgtagtgtgtgtgcacagggcacctgcagagaggcaggggagatgggggtcact
tgcgaatgtcctccaggacgcagtggggctctatgtgatgaaacaacagctcctaatccc
tgtcagaataacaggtgtgttcatggtttgtgtgtggcaaaaggtcaatcctatagttgt
caatgtaatgagggctaccagggtcagtactgtgataaagagcaggagcctccagcctgt
agggggcacagctgtggacgaggggagtgtcatgtgtcagaggctggagaaccggtctgc
aagtgtcaaccaggctacactggaccaacctgtgacacagagcccacatgtcagggggaa
atggtgagggagcagctaaagcgccaccaagccctcagaacctgcacgtccaccagcaag
attccccgcgtggattgtccacggtcctgccaagcgtcagcgccccctggcgtttgctgc
ggtgtcactaaaaccagaagaagaaaggtggttttccgctgcactgatggcacctcgtac
tcagaggagatggagaccactctggaatgtggctgctccaaatgccctttgtaa
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integrated database retrieval system
