Nothobranchius furzeri (turquoise killifish): 107380372
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Entry
107380372 CDS
T05163
Name
(RefSeq) LIM domain kinase 1-like isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107380372
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nfu01001
]
107380372
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107380372
Protein kinases [BR:
nfu01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
107380372
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
RIO1
ABC1
PDZ_2
PDZ_4
APH
B2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
107380372
NCBI-ProteinID:
XP_015807083
UniProt:
A0A8C6PXH8
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Position
sgr06:26373513..26436410
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AA seq
675 aa
AA seq
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MRLMLLCCTWKDERMGDEEAGESLPECAGCKGRIYDEQYLQALNADWHTLCFRCCECSTS
LSHWYYEKDGRLYCKTDYWAKFGELCHGCNDPITTGLIMVAGEQKYHPECFSCLSCRTFI
GDGDTYALVERSKLYCGHCYHQTIVTPVSLPDSPCSQIPHTVTLVSIPATDKSDNGRKGR
GFSVAIDQPISPTNGYGPEQRCTVRVSQVDADCISPDVKNSIHVGDKILEINGTPIHHVP
LDEIDLLIQETSRRLQLTIEHDPHAQRKERSSSEAEDQVDGTLSTPMSGGPSPILPITQP
PNHDISNLKSRIITRSYSIDKSPGSSNAASPISQRKEINRSESLRVMSNRTHRIFRPSDL
IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDDETQRTFLKEVKVMRCLDHPNVLKF
IGVLYKDKRLNFIAEYIKGGTLRETIKKMDSNHPWNQRVSFAKDIAAGMTYLHSMNIIHR
DLNSHNCLVREDNTVVVADFGLARLMVDDKLEGKLAQGKLSAGLKKPDRRKRYTVVGNPY
WMAPEMIHGKSYDERVDIFSFGIMLCEIIGRVNADPDYLPRATDFGLNVSGFLEHFCPPD
CPPAFFPMAALCCDLDADKRPAFSKLEEWLENLKMHLDIGLPLMSELDQLHKSFWERHSV
KHPENGLHTHPEQPE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgctgctttgctgcacctggaaggacgaacgcatgggagatgaggaagct
ggggagagtttgcccgagtgtgcgggatgcaaagggaggatctatgatgagcagtacctc
caggctctgaacgccgactggcataccctctgcttcaggtgttgtgaatgcagcacatcc
ctgtcccactggtattatgagaaagatgggcgactttactgcaagacagactactgggcc
aaatttggggagttgtgccatggctgcaacgacccgatcaccaccgggctcatcatggtt
gcaggggaacagaaatatcacccagaatgcttcagctgtctgagctgccggactttcatc
ggtgatggagacacgtacgctctggtggagagatccaaactctactgcggtcactgttac
caccagaccatcgtcaccccagtgtcactgccggactcgccatgttcccagatccctcac
accgtcacactcgtgtccatcccagctaccgacaagagcgacaatggacgcaaggggcgg
ggattctctgtggccatcgaccagccgatcagcccaaccaacggctacggtcctgagcag
agatgcaccgttagagtctcgcaagtggatgctgactgcatcagcccagatgtgaaaaac
tccatccatgttggagacaagatcctggagatcaacgggacacccattcaccatgttcct
ctggacgagattgacctgctcatccaggagacgagccgccgactgcagctcaccatcgag
cacgacccacatgctcagaggaaagagcgaagctcctcagaggctgaagatcaggtagat
ggaactctatccacccccatgtcagggggccccagccccattctgcccatcacccagccc
cccaaccatgacatcagcaacctgaaatcccgcatcataacgcggagctacagtattgat
aagtctccaggctccagtaacgctgcgtcgcccatttcccagaggaaggaaatcaatcgg
tcagagtcgctccgggtcatgtccaatcggactcaccgcatcttccgcccgtctgacctc
atccacggagaagtgcttggaaagggatgcttcgggcaggccatcaaggtgacgcacagg
gagaccggggaggtgatggtgatgaaagagctaattcgctttgatgatgagacacagaga
acattcctgaaggaggtgaaagtgatgcgatgcctcgatcaccccaacgtgctcaagttc
atcggagtcctctacaaagacaagagactcaacttcatcgcagagtacatcaagggagga
accctgagggaaaccatcaagaaaatggacagtaaccatccctggaaccagcgggtcagc
ttcgccaaggacatcgctgctgggatgacgtatctccattccatgaacataattcaccgg
gacctgaactcacacaactgtctggtgcgagaggacaacactgtggtggtggcagacttc
ggtctggctcggctcatggtggatgataagcttgaaggaaagctggcgcagggaaaactg
tctgcgggcctgaagaagcctgaccgtagaaagaggtacactgtggtggggaacccgtat
tggatggctcctgagatgatccacggaaaaagctacgatgaaagagtcgacatattttct
tttggcatcatgctctgtgagataattggtcgagtgaacgcagacccagactacctcccc
agggctacggactttggactcaacgtttctggcttcctggagcacttctgtcctcctgat
tgtccccctgctttcttccccatggctgctctttgctgtgaccttgatgcagacaaaagg
cctgctttttccaaactggaggagtggctggagaacctgaagatgcacttggacattggt
ctgcccctgatgtctgaactggaccagctgcacaagtccttctgggagcgccacagcgtc
aaacaccctgagaacggcctgcacactcatcctgagcagcctgagtag
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