Nothobranchius furzeri (turquoise killifish): 107380810
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Entry
107380810 CDS
T05163
Symbol
lingo1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107380810 (lingo1)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
107380810 (lingo1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_9
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
107380810
NCBI-ProteinID:
XP_015807653
UniProt:
A0A1A7ZAL4
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Position
sgr06:complement(53602823..53634454)
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AA seq
613 aa
AA seq
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MVARRVTGHSCLVACWQPILILMLGTVLSSSTTLCPSRCECKEHSVMCHRRRLVSLPEGI
PAETRLLDLSKNRIRTINQDEFSSLTNLEHLELSENTISTIEPGAFNNLNFLRTLGLHSN
KLKLIQLGVFTGLSNLTELDISENKIVILLDYMFQDLYSLRSLEVGDNDLVFISNRAFHG
LSSLEHLSLEKCNLTYVPTEAFSHLHSLITLRLRHLNINVIRDYSFKRLYRLKVLEIANW
PYLDTMTPNCLYGLNLTSLTIANANLTAIPYVALRHLVYLRFLNLSYNPILTIEGNKLHD
LLRLQEFHLVGGRLAMIEPYSFRSLNYLKILNVSGNSLSTLEESAFHSVGNLETLALYDN
PLACDCRLLWVFRRRWRLNFNKQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIRDR
SPQQKFVDEGAIVHFACQADGDPAPVILWLSPQKRFITTKTIGRLSVLPDGTLEVRYAQI
QDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTKANVP
FPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMSST
AVDAPRKFNMKMI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtggccaggcgagtgactgggcacagctgcctggtggcttgctggcagcccatcctg
atcctgatgctggggactgtgctgtctagctccaccacactctgcccatcccgctgtgag
tgcaaagagcactccgtgatgtgccacaggagaaggctcgtgtcccttcccgaaggcatt
cctgcagaaaccaggctgctggacctcagcaagaaccgcatcagaacgattaaccaggat
gagttttccagcttaactaaccttgaacacctggagctgagtgaaaataccatctccact
attgaacctggagcgttcaacaaccttaatttcttacggactttggggttgcatagcaac
aagcttaagctgattcagctgggcgtgttcacaggcctgagcaatctcacagagctggac
atcagtgagaacaagattgtcatcctgttggactacatgttccaggatctgtacagcctc
cggtctctggaggtgggtgataatgatctggttttcatctccaaccgggcttttcatggt
cttagtagcctagagcacctaagtcttgagaagtgtaacctgacctatgtgccaactgag
gcttttagccaccttcacagtttgatcactctcaggctgcgccatctcaatatcaatgtc
atacgggattactcctttaaacggctctatcggctgaaggtcctggaaatagccaactgg
ccatacttggatacgatgaccccaaattgtttgtatggattaaatctcacctctctcacc
atcgccaatgccaacctgaccgcaatcccttatgtagccctgcggcacttggtttacttg
cgctttcttaatctctcttataatcccatccttactatagagggaaataagctccacgac
cttcttcgtctccaggagtttcacctggttgggggcagactagctatgattgagccctac
tctttccgcagcttgaactacctgaaaattctaaatgtttccgggaactctctcagcact
ttggaggagtctgctttccattcagttggcaacctggaaaccctggccttgtacgataac
cccctggcctgtgactgccgactcctatgggtgttccgacgacgctggcgactaaacttc
aacaagcagcagcccacgtgtgcttctcctgagtttgttcaaggcaaagagttcaaagat
ttcccagatgttctgcagccaaactacttcacgtgtcgcaagtcaaggattagggatcgc
agtcctcagcagaaatttgttgatgaaggagccattgttcattttgcctgtcaagcagat
ggggatcctgctccagtaattctgtggctctctccacagaaaaggtttatcaccaccaag
acaattggaaggctctctgtgttaccagatggcaccctcgaggtacgctatgctcaaatc
caagataatggcacatatgtgtgtatagccagcaatgcaggtggaaacgacacctctctt
gctcacctacatatccatagctactcgcctgattggccacatcaacccaacaagacgttt
gctttcatatccaaccagcctacggagacaggtgctaatggtaccaaagccaacgtccct
tttccgtttgacatcaagactctgattatcgcgaccacaatgggcttcatctcctttctt
ggtgtcgtcttattttgcctggtgctgctgtttctgtggagcagaggtaaaggcaacacc
aagcacaacattgagattgagtacgttccacgcaagtcagacgctggcatgagcagcacc
gcggttgacgcgcctcgcaagtttaacatgaaaatgatttaa
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