Nothobranchius furzeri (turquoise killifish): 107381928
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Entry
107381928 CDS
T05163
Name
(RefSeq) neural-cadherin-like
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
CADH_Y-type_LIR
Cadherin_pro
Cadherin_3
EGF
Cadherin_4
hEGF
RET_CLD1
Y_Y_Y
He_PIG
Dicty_CTDC
Motif
Other DBs
NCBI-GeneID:
107381928
NCBI-ProteinID:
XP_015809347
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All DBs
Position
sgr07:complement(48178903..48877189)
Genome browser
AA seq
2591 aa
AA seq
DB search
MVRVELTVTDVNDNAPEWSMVPSPYLAVVPPDAAAGSVIYKLNALDGDEGLNGEVEYFLS
DGGDGRFEVDRKSGQVRTTGLPLQRDREYLLTVVAADGLGSRSAPAVISVVAGARPPQFT
NASFTIAIPENTPEGQPFLATPAVSFQKKPISYSLLINPSSLFSISAETGEISLTRAIDY
ESDQHRYLLLVRASEGQDSMSSAAEVRVVIVDENDCVPEFLQSIYSKDSVPETVTTATSL
LQVSANDCDSGANADLTYYTISPDFTISPHGTIFPAGLLDYERPNHLYEFVVMAVDRGGV
PRTGTTTVRIRMANVNDEAPEFSQHIYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITT
GNEEGNFVIDNQKGLIRLRSSPPPRLQGVEYILNITATDDNASGGPQALSSTAQVIVGVD
DVNNNKPVFEKCQQYRESTSVLENQPAGTFVLQVHAVDADEGSNGRVTYGFMHKDSTVPA
FSIHPDTGIIVTARKFDRERQREFAVTVTATDQAADPLIGICQLNILILDQNDNSPKFEN
IRYEYFLREDTMIGTSFLRVAAHDDDFGTNAAVTYSMSSEQPEYLRVSPLTGWVFVNQPI
SQRSYISREIVATDGGNRSSSVELAVTITNVKNQPPQWENDTYSVVIPENTVRDTPIVTI
KATSPLGDPRVTYNLEDGMVPETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFILRV
RAQNVAAVPLAAFTTVYVNVTDVNDNVPFFTSSIYEASVTEGADSGTTVFQVSANDLDLG
LNGKISYSLLEDRSGDHQYFRIDPELGFIYTQAVFDRETKSSYLLEVQSTDGLESARPGK
HGQPNSDTAYVRVFISDVNDNKPTFGQAFYEVDVDEDADVGFAVLTVSANDGDEGGNAKL
RYQITSGNTGGVFDVEPEVGTIFIAQPLDYEQNKRYKLHILASDGKWEDYTTVTVSVVNK
NDEAPVFTVNEYYGSVTEELDGSPVFVLQVTASDPDKDADQEALRYSLHGQGAESEFIID
EVSGKIYAQRTLDREERAVWRFVVLATDEGGEGLTGFTDVIINVWDINDNAPIFPCALSC
HGDVAENSVIGTSVMEMTATDLDDSAVGQNAVLSYRIVGSMDATNAALGGVPTFSEMFTI
NPITGTITVGLGGLDREQVESYLIVVEARDGGGMAGTGTATIQVKDVNDHAPRFTDHSCL
ARISENAELNAEVLELVAEDRDTGENAQLTFSVVAGDQEQKFYMVSHKQEQRGILKLKKR
LDYERHSEQRFNLTLKVEDLDFSSFLHCVVEVEDYNDHAPVFIPHFLSLAPLSEDISVGT
SVAHLVASDSDSGQNREITYSLLEDSDPDGLFTIDQSGVISVARPLDREKSPQHHLVVIA
TDHGFPPLMGSATVQLPLLDVNDNGPEFEAAYAPIVFENVAGPQVVRLNQTSTLLRAVDQ
DSPENGPPFHFTVPPEYRYSNDFYLQDNLNGTATITALRTFDRERQKEFLLPIVMSDSGH
PARTVTSTLTVTIGDQNDHPHVAGEKQISINSHRGRMPTTVLGKVYAPDPDDWDNKTYVF
EGHMPSYFILNKRTGFLIIKENTPPGTYQFQVRVSDGAWPDAVSTVTVHVKELRDDAIYN
SGSLRLADITAKEFLELRGKQRSRYELLVDFLSEMLSVPPDGVNIFSLMDVRERMLDVRF
AVHGGPSFLQPEKMHGYLAAHKQKLQSFLQVSVFQVRVDECTSSECSSAGGCSSTLNVRD
TPTVVDCGTMSLVSVTVESTAVCSCPGREQSHQSCTTYPRNPCFNGGICVDTQHGYRCQC
PAQFEGPECQQNKHSFHGNGYAWFPPMTPCFDSHVSLEFITDVADGLLLYSGPLAQLQTW
DHEDFMAMELIDGTPTLKINHGSGTLVLQLPGNINVADRRWHRLDVRSNSKEVRFTLDRC
SGAPVKEMEGLGSWLTTEDHSTCEVTGVTPNTDRHLNMSQVLQLGGVNEDIPYIYPQLQH
KHFTGCIRNLVVDSKLYDLGSPADSQSSSPGCLTTDSSCVNMGYPSCGHRGRCHGEWGSF
SCQCVAGYTGHQCEEEAREFSFDGHSHVHYQLASPLPARRTWIQVLVRTRKHSSVIIHLV
SREQTEYLRLEIFQGLLCIFYNLGDGNYNLTLPSYRLDNGEWHEVFFDRHDNELTLRLDG
GGGQREVTGTWSRSREIIIDPTAVMLGNAFPSGINKSFQGCMRDARLNGRYMPLDSQPRD
GVSQVSMQGLSAGCSSDSCKRNQCNPPFTCVDLWRVHECRCPPGHMIRVNGTRKFCVYTL
CATRPCHRGTCVAQTPSKFTCHCPEGYRGRHCETALAVYREDVGLSFSSLFAICICFMAL
LALLLGIFLYTRWRSYKGLKEGVYHVSAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAE
LQKSLQPSPAQSVQYCRSRALHHPPPSHHHHLLHQATAATPSAQSLDPLSRTSSSTTLPP
SAASTSSTTTTSLRRDVPPTRPPAQGQARPPQLARRSLSFSSQDLARYLCEIIRDADQHP
DSGPFDSLQVFSTEGGGSPAGSLSSFSSAGLDVGSSGDGAGQAVREETLGEWGPRFEKLR
ALYERAEASDL
NT seq
7776 nt
NT seq
+upstream
nt +downstream
nt
atggtcagggtggagttgacagtgactgacgtgaatgataacgccccagaatggagcatg
gttccaagtccttacctcgcagtggtcccccctgatgctgcagctggatcagtcatctac
aaactcaacgctctggatggagatgaaggcctgaacggtgaagtggagtatttcctgtca
gatggtggtgatggtcgttttgaggtggacaggaagagtggccaggtgcggacaacgggc
cttcctctgcagcgggacagagagtacctgttgactgtggtagccgctgatgggctgggc
agtcgcagtgctccagctgtcatctctgtggttgctggagcgcggccgccacagttcacc
aacgcctccttcaccatcgccatcccagaaaacacccctgaaggacagcccttcttggca
acacctgctgtgtccttccagaagaaaccaatcagctacagcctcctcatcaatcccagc
agtctgttctccatctcagcagagacgggtgaaatcagcctgacccgcgccatcgattac
gagagcgaccaacatcgttacttgctactggtgcgggccagcgagggtcaggacagcatg
agcagtgcagcagaggtgcgagtggttattgtggacgaaaacgactgcgttccagaattc
cttcaatcaatttacagtaaggacagcgttcctgagaccgtaactactgccacatccttg
ttgcaagtgtcagccaacgactgtgactctggggccaatgcagatttgacctactacacc
atcagtccagatttcaccatttctcctcacggaaccatcttcccagcgggcctgttggat
tatgaacggcccaatcacctgtacgagtttgttgtcatggctgtcgacaggggtggtgtc
cctcgcaccggcacaacaactgtacggatcagaatggccaatgtgaacgatgaagcgcct
gagttttctcaacacatatatcggacctttgtttctgaagatgcgggccccaacacactt
gtggccacagtgctggccaaagaccctgatggggatgggatcacctataaaatcaccaca
ggaaacgaggagggcaatttcgtcattgacaatcagaaaggtttgatccggctgcgctcc
agcccaccacctcgcctgcagggagtggaatacatccttaatatcacggccaccgatgat
aacgcctcaggcggacctcaggcactgtcatccacagcccaggtcatagttggagtggac
gatgtgaacaacaacaagcctgtctttgagaaatgtcagcagtaccgggaaagcacatcg
gtcctggagaaccagccggcaggcacatttgtcctgcaggttcacgctgtggatgcagac
gaaggctccaacggccgggtcacttatggcttcatgcataaagactctacagtgcctgca
ttcagtatccaccctgataccggaataattgtgacggccaggaaatttgatcgtgaacgc
cagcgggagttcgcagtgaccgtgaccgccacagaccaagcagcggatcctctgattggc
atttgtcagctaaacattctcattctggaccagaacgacaacagccccaagtttgagaac
atccgatatgaatacttccttcgtgaggataccatgattggaaccagtttcctgcgggtg
gcagctcatgatgatgactttggaaccaatgcagccgttacgtacagcatgtccagtgag
cagcccgagtacctcagggtcagcccactaacaggctgggtgttcgtcaaccagcccatc
tcacagagaagctacatctccagggaaattgtggctacagacggaggaaacaggagcagt
tcagtggagctggcagttaccatcaccaacgtaaagaaccagcccccgcagtgggagaac
gacacttacagcgtggtcataccagaaaacactgttcgggacacacccattgtgaccatc
aaagccacctcacctcttggagatccaagagtaacttacaatttggaggatggtatggtc
ccagagaccaacatgcctgtccgcttctacttgaccccgaaccgagaggatggttcggcc
tccatcctggttgcagaacccctggactacgagaccaccagaaatttcattctgcgagtt
cgagctcagaatgtcgctgctgttcctttggccgccttcacaaccgtctatgtcaatgtc
actgatgtgaacgacaacgtcccgtttttcacatcttccatctatgaggcttcagtcact
gaaggagcagattcagggactacggttttccaggtttcagccaatgaccttgacctgggt
cttaatggcaagatttcttactccttgctggaggatcgcagcggggaccatcagtatttc
cgtattgacccagagctaggctttatctacacccaagctgtgtttgaccgagagaccaag
agctcatacctgttggaggttcagtctacagacggtttggagtcagcaagacctggaaag
cacggtcaacccaactcagacacagcatatgttcgtgtttttatcagcgacgtcaatgat
aacaagccaacatttggacaggcgttttatgaagttgacgtggacgaggacgccgacgta
ggctttgctgttctcacagtcagcgccaatgatggggatgaaggtggaaatgccaagcta
cggtaccagattacatcaggaaacacggggggagtgtttgatgtcgagccagaggtgggc
acgatcttcattgctcaacctctggactatgaacaaaataaaaggtacaagctccatatc
ctggcctcagatgggaagtgggaagattatacaactgtgacagtgagtgtggtcaataaa
aatgacgaggctccggtgttcaccgttaacgagtactacggcagcgtaaccgaggagctg
gatgggtcgcctgtgtttgtgcttcaggtgacggcatctgacccagataaggacgctgac
caggaggccctgcgttactccctccacggtcagggtgcagagagtgaattcataatagat
gaggtctcaggcaagatttacgcccagcggaccctggaccgcgaggaacgagctgtttgg
cgttttgttgtccttgcaacagatgagggtggcgagggcctgacaggcttcacagatgtc
atcatcaatgtgtgggacatcaatgacaatgcacccatcttcccttgtgctctcagctgt
catggagatgtagcagaaaactctgtaataggaacttctgtcatggaaatgactgcaact
gatctggatgactccgctgtggggcagaacgctgtgctttcctatagaatagtgggcagt
atggatgccactaacgctgccttaggaggagtacccaccttctcagaaatgttcaccatc
aaccccattacaggaacgatcactgtgggattaggaggtctggacagagaacaagtcgag
tcctacctaattgttgtggaggccagagatggtggagggatggcaggaactggaactgca
accattcaggtcaaggatgttaatgaccatgctccaaggttcacagatcattcctgcctg
gcaaggatctctgagaatgcagaactcaatgcagaggtcctggagcttgtggcagaagac
cgtgacacgggagaaaatgcccagctgacctttagtgttgtggctggagatcaagaacag
aaattttacatggtcagtcacaagcaagagcagcggggcatcctgaagcttaagaaacgt
ttggactatgaacgacacagtgagcagaggttcaacctcacactgaaggttgaagaccta
gacttctcaagctttcttcactgtgtagtcgaggtagaggactacaatgaccatgctcct
gtctttattccacactttctgtcccttgccccattatctgaggacatcagcgtgggaacc
agtgtggctcatctggtcgccagtgattcagattcaggccagaaccgtgaaatcacttac
agcctgttggaggactcagatcctgatgggttgttcactattgaccagtcaggtgtaatc
tctgtggcccgaccactggacagagagaaatcccctcagcatcacctggttgtcatagca
acagatcatggatttccaccgctaatgggtagcgccacagtgcagctgcctctgttggac
gtaaatgacaatggcccagagtttgaggcagcgtatgccccgatagtcttcgagaacgtg
gctggacctcaggtagtaaggttgaaccaaacatcaacacttctccgagctgttgaccag
gactctcctgaaaacggaccaccctttcatttcaccgtgcctcctgagtatcgctatagc
aacgacttctaccttcaggacaacttgaacggcacggcaactataacagctctgaggacg
tttgatagagaacgccagaaggagttccttcttcccatagtgatgagtgacagcggccat
cctgctagaacagtgaccagcaccctaactgtgaccattggtgatcagaatgatcaccca
catgtggcaggggagaagcagatctccatcaacagtcacagaggtcgaatgccaacaacg
gtgcttgggaaggtctacgccccggaccccgatgattgggacaacaagacgtatgtcttt
gaaggtcatatgccgagttacttcatcctgaacaagcgaactggttttcttatcatcaaa
gagaacactcctccaggcacctaccagttccaggtgcgggtctcggatggggcttggcca
gacgctgtatccactgtcactgtgcatgtgaaggagctccgtgatgatgccatctacaac
tcggggtcccttcgtctggcagacatcacagcgaaggagttccttgagctgaggggaaaa
cagcgcagccgctacgaactgctcgtggacttcctgtcggagatgctctccgttccacct
gacggagtcaacatcttcagcctaatggatgtgagagaacgaatgctggatgtccgcttt
gctgtgcacggtggcccttccttcctccagccagagaagatgcatggttatttggcggcc
cacaaacaaaagcttcagtctttcctgcaagtcagcgtgtttcaagtccgtgtggatgag
tgcaccagttcagagtgcagcagtgcaggaggctgcagcagtactttgaatgtgcgggac
acacccacagtggtggactgtgggactatgagtctagtatctgtgacggtggagtccact
gccgtgtgctcatgcccaggtagagagcagtcccatcagtcctgcaccacatatcccaga
aacccctgcttcaatggtggcatttgtgtggacactcagcatggctacaggtgccaatgt
ccagctcagtttgagggaccagagtgccagcagaacaagcacagtttccatggcaacggc
tatgcctggtttcctcccatgacgccgtgttttgacagccatgtgtcactggagttcatc
acggatgtagccgatggactgctgctgtacagcgggccgctggcccagctgcagacctgg
gaccacgaggacttcatggccatggagctaatagacggaacccccaccttaaagatcaac
cacggctccggtacactggtgctacagttgccagggaacatcaatgtggcagacaggcgc
tggcaccgcctggacgtccgcagcaacagcaaggaagtccgcttcaccttggatcgatgt
tctggggcaccagtaaaggaaatggagggtctgggcagctggttgaccactgaagaccac
tccacctgtgaggtgacaggtgttacgccaaacacagacagacacctgaacatgagccaa
gtactccagcttggtggcgtaaatgaggacatcccctacatctaccctcagcttcagcac
aaacacttcaccggctgcattcgcaacctcgttgtggatagcaagctgtatgatttgggc
tccccggccgactcccagtccagctccccaggctgcctgaccacagatagcagttgtgtc
aacatggggtatccgtcctgtggccatcggggtcgctgtcatggtgagtggggctccttc
agctgccagtgtgtagccggatacacgggacaccagtgtgaagaagaagcccgggagttt
tcctttgacggccacagtcacgtgcactaccagctggcatctcctctgcctgcccgaaga
acgtggatccaagtcctggttcgaacccgcaaacacagcagcgtcatcatccacctggtc
tccagggagcagacggagtacctgcgactggagatctttcagggcctcctttgtattttc
tacaacctcggcgatggaaactacaacctaactctacccagctatcgccttgacaatggc
gaatggcacgaggtcttctttgatcggcatgacaacgagttgactctgagacttgatggt
ggaggaggacagcgggaggtgacgggaacatggagcagaagtagagaaatcatcattgat
cccacagctgtgatgctgggaaacgccttcccttcgggaatcaacaagagcttccaaggc
tgcatgagggacgcacgcctcaatggtcgttatatgcctctggacagtcagccaagggat
ggggtttcccaggtcagcatgcagggactctctgctgggtgctcgtcagactcctgcaaa
agaaaccagtgtaaccccccctttacctgtgttgacttgtggagagttcacgaatgcaga
tgtcctcctgggcacatgatccgtgtgaatgggaccagaaagttctgcgtgtacaccctg
tgtgcgacgcggccttgtcaccgtggtacctgtgtagcccagacgccctccaagttcacg
tgtcactgccccgagggctacagaggacggcactgcgagacggcgctggctgtgtacagg
gaggatgtgggcctgagcttcagctcgctgtttgccatctgtatctgcttcatggcctta
ctggcgctgctgctgggcatcttcctctacactcgctggaggtcctacaaggggctgaag
gagggcgtgtaccacgtctcggcacaccacgacggctgggaggacatccgagagaatgtg
ctcaactacgatgaggagggaggcggggaggaggaccagaatgcttacgacatggcagag
ctgcagaagtccctccagccgagccccgcccagtcggtccagtactgccgctccagagcc
ctgcaccacccgcctccttcccatcaccaccacctcctccaccaggcgaccgcggccacg
ccctcagctcagtcactggaccccctcagccgcacatccagctccaccaccctgccgccc
tctgctgcctccacgtcatccaccaccaccaccagcctccgcagggacgtgccccccaca
agacccccagcccagggccaggctcgccccccccagcttgccagacgctccttgtccttc
tccagtcaggacctggctcgctacctgtgtgagatcatccgtgacgcggaccagcacccg
gactcgggaccttttgactcccttcaggtgttctccactgagggagggggctcacctgcc
ggctccctcagctccttcagctcagcagggctggatgtgggcagctcaggggacggggct
ggacaggccgtgagggaggagacgcttggcgagtgggggccgcgctttgagaagctgcgg
gcgctttatgaacgagccgaggccagcgacctctga
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integrated database retrieval system
