Nothobranchius furzeri (turquoise killifish): 107382134
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Entry
107382134 CDS
T05163
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107382134 (slit2)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
107382134 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
LRR_1
hEGF
DL-JAG_EGF-like
EGF_3
JAG1-like_EGF2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
107382134
NCBI-ProteinID:
XP_015809617
LinkDB
All DBs
Position
sgr08:complement(16286302..16327294)
Genome browser
AA seq
1562 aa
AA seq
DB search
MVGALRPIAFGRSLGTAPRLLVTVLVLVLFGGADGQPCPAQCSCTGTTVDCHGQGLRSVP
RNIPRNAERLDLNANNLTKITKTDFSGLKHLRVLQLMENKITTIERGAFQDLKELERLRL
NRNNLAVFPELLFLGTTKLYRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDGA
FRALRDLEVLTLNNNNMSRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRL
GLYTQCMFPPHLRGHNVAEVQKKEFVCGDEDEGHQSSSSSSCSVLQCPESCTCSNNIVDC
RGKSLTEIPTNLPETITEIRLEQNAIKVIPAGAFSSYKKLRRIDLSNNQISELASDAFQG
LRSLNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDN
KLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANK
RIGQIKSKKFRCSGAEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQY
TAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELILTSNRL
ENIHHRMLKGLGGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDTLH
SLSTLNLLANPFICNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEIPIQDVAVQDFACED
GNDENSCSPVLRCPAECSCLDTVVRCSNKGLTSLPKGLPKETTELYLDGNHFTQVPVELS
HYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHG
NDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGPGDMTD
KLLLTTPSKKFTCTGPVDLSIQAKCDPCLSNPCKNDGTCANDPVHYYRCTCPYGFKGQNC
EEPIHACISNPCQSGGTCHLKEGEGSNFWCVCPEGFEGDTCEINIDDCEDNDCENNSTCV
DGINNYTCMCSPEYTGELCEEKLDFCAPELNPCQHDSKCILTPQGYKCECTPGYVGEHCE
VDYDDCEENKCQNGGHCIDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNHECLNAA
QCVVMGTDPQCQCLHGYEGEHCETLASVNFVNRESYLQLPSSLLSPETNISLQIATDEDS
GVLLYKGDNDHIAMELYRGRLRVGYDTGSYPPSAIYSVETVNDGSFHSVELIAADQSLSL
SIDGGPPKSIGSISKRSTLNIDSPLYLGGMPERLSASGGLSALQLSSGGRNGTSFHGCLR
NLYINGKLQDLGAGLKPGGLGSGTPQSSKQWLGSGVEPGCQPCLRGACLQGDCHPTGHRG
FTCTCHPGWTGALCDQQVSNPCDGNKCIHGTCIPINSYSYSCRCQPGFAGVLCDEQSQDA
GSPCSLSHCKHGKCRVSGLGKAYCECNGGYTGEACDREVACRGERIRDVYQRQQGYAACQ
TQEKVSRLECRGSCPAGAEGQGACCTPLRSKRRKYTFQCTDGSSFVQEVEKIVKCGCTKC
SS
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctgcgccccatcgcctttggacgctccttggggactgcgccaaggctg
ctggtgaccgtattggtcttggtcctgtttggcggagcggacgggcagccctgcccggcc
cagtgttcctgcaccgggaccacagtggactgtcacggccaagggctgcgcagcgtgccc
aggaacatccccaggaacgcggaacggttggatctgaatgcaaacaacctcactaaaatc
accaagacagatttttcaggactgaagcatcttcgagtcttgcagttaatggagaacaaa
atcaccacaatcgaaaggggagccttccaagacctaaaggagctggagagactacgccta
aatcggaataacctggccgtatttccagagctgcttttcctgggaacaacaaagctctac
agacttgacctgagtgaaaaccagattcagggggttccaaggaaagccttcaggggagct
gtggaaatcaagaacctccagctggactacaaccacatcagctgcattgaggatggagct
ttcagagcattacgtgacctggaagtactgaccctgaacaataacaacatgagtcggctg
tctgtggccagttttaaccacatgccgaagctcaggacctttcgcctgcactccaacaac
ttgcagtgtgactgccatgttgcctggctgtccgagtggctgcgacagcgcccccgcctg
ggtctctacacgcagtgcatgttccccccacacctgaggggccacaatgtggcagaggtg
cagaagaaggagtttgtgtgtggagatgaggatgaaggtcaccagtcatcatcgtcttcc
tcctgcagcgttttacagtgcccggagtcctgcacctgcagcaacaacatcgtagactgc
agaggaaagagtctaacagaaatacccaccaacctgcctgaaaccattactgagatacga
ctggagcagaacgctatcaaggtgatcccagctggggccttttcttcctataagaagctg
cgccggatagatctgagtaacaaccagatatcagaactggcctctgatgccttccaaggt
ctgcgttcccttaattctttagttctgtatgggaacaaaattactgagatttccaaagga
ctgtttgaggggctgttttctcttcagctgctgctgctgaatgctaataagatagcgtgt
ctgcgagtggacgcctttcaggaccttcataacctcaatctgctgtcactgtatgacaac
aagctccaaaccatagccaaggggactttctcatctctgagggccatacaaacacttcac
ttagcccagaacccgtttatctgtgactgccatctgaagtggctggctgactacctgcag
gataatcccatcgagacgagcggcgcccgctgcaccagcccccggcggctcgccaacaaa
cggatcggacaaatcaagagcaagaagttccgttgctcaggtgctgaggattaccgcagt
aagcttggaggtgactgctttgctgacttggcttgccctgagaagtgtcgctgtgagggc
acaacagtggactgctccaaccagaaactcactaaaatccctgatcacatcccgcagtac
acagcagaactgcgtttgaacaacaatgaattcaccgtgcttgaggcgacgggaatcttc
aaaaagctgcctcagctgaggaaaattaacctgagcaacaaccgcatcacagacatagag
gaggggacgtttgaaggagcttcaggggtcaatgagttaattctgacctccaacagattg
gagaacattcaccaccgcatgttaaagggactcggtggccttcgcacacttatgctgagg
agtaaccgcatcagctgtgtgagcaacagcagcttcgttggtctgagttcagttcgtctc
ctttcgctctacgacaaccagatcacctccatgaaccccggagccttcgacacgctgcac
tctctctccacgctaaatctgctggccaatcccttcatctgtaactgccacctggcctgg
ctcggtgattggttgaggaggaagcgtattgtgaccggaaaccctcgctgtcagaatcca
tatttcctcaaagagattcctatccaggatgtggctgtccaagactttgcctgtgaagat
ggtaacgacgagaacagctgctctcccgtcctgaggtgtccggctgagtgctcctgtctg
gacacggtggtgcgctgcagcaacaagggcctcacctcgctccccaaaggcctccccaaa
gagaccaccgagctgtatttagatggtaaccacttcactcaggttcccgtggagctctcc
cattacaaacacctgactctcattgatttgagtaacaaccagatcagcacgttgtccaac
cacagcctcagtaacatgtccgagctgctgaccctaatcctgagctacaaccgcctgcgg
tgcatcccagttagagcgttcgacggactcaaatccctccgtctgctatctctccatggt
aatgacatatctctgataccagagggagcctttaaggacctgtcatcactttcccatttg
gctctgggtgccaaccccctgtactgtgactgccacatgcagtggctctcagactgggtg
aagagtggatacaaggagcctgggattgcccgttgtgctgggccgggtgacatgacagac
aaactgctcctcaccacgccctccaagaagttcacatgcacaggccctgtggatttgagt
atccaagctaagtgtgacccctgcctatccaacccctgcaagaatgatggcacctgtgct
aatgaccctgtgcactactaccgctgcacctgcccttatggatttaagggacaaaactgt
gaggagcccattcatgcctgcatcagtaacccatgtcagagtggtggaacttgtcacctg
aaggagggggaaggaagcaacttctggtgtgtgtgtccagagggatttgaaggtgataca
tgtgagatcaatattgatgactgtgaagataacgactgtgagaacaactctacctgtgtt
gatggaatcaataactacacatgcatgtgctcccctgagtacacaggagagttgtgtgag
gagaaactggacttctgtgcccctgagctgaacccatgtcagcacgactcaaagtgcatt
ctgacgcctcaaggatacaagtgtgagtgcactccaggttatgttggggagcactgtgag
gtggactatgatgattgtgaggagaacaaatgtcagaatggaggccattgcattgatgca
gtgaatggatacacctgcatctgtccagaaggatacagcgggttattctgcgagttttcc
ccgccgatggtccttcctcgcaccagtccttgtgacaaccatgaatgcctcaatgcggcc
caatgcgttgtcatgggaacagacccccagtgccagtgtctccacggctacgagggtgag
cactgtgaaacactcgccagcgtcaactttgtcaacagagagtcatacctgcagcttccc
tccagcctcctctcacctgagaccaacatcagcctgcagattgctacggatgaggacagt
ggtgtgcttttatacaaaggcgacaatgaccacatcgctatggagctgtaccgggggcgt
ctcagggttggctatgacaccgggtcctacccaccttctgctatctacagtgtggagaca
gtgaatgatgggagcttccattcggtggagttaatagcagcagatcagagtctgtctctg
tccattgatggtggtccacccaaatccattggttccatcagcaaacgatccaccctcaac
atcgattctcccctttacctgggagggatgccagagagactctcagcctccggcggtctt
tctgccctccagctcagctcaggaggtcgcaacggcactagcttccacggctgcctgcgt
aacctctacatcaatgggaaactgcaggacctgggagcggggctgaagccaggaggtctg
ggttctgggactccacagagcagcaagcagtggctggggagtggggtggagcctggctgt
cagccatgtctgagaggagcttgtctccaaggagactgtcacccaacgggtcaccgaggc
tttacctgtacctgccaccctgggtggactggagccctctgtgaccagcaagttagcaat
ccttgtgatggtaacaagtgtatccatggaacctgtatcccaatcaactcatactcatac
tcctgccgctgccagcccggcttcgccggcgttttgtgtgacgagcagagtcaggacgct
gggagcccctgcagcctgtctcactgcaaacatggaaaatgtcgagtttcaggcctgggc
aaagcttactgtgagtgtaacgggggctacacaggagaggcgtgcgacagagaggttgcc
tgtcgtggggaacggatcagagatgtctaccagagacagcaaggctatgcggcgtgccaa
acccaggagaaggtctcccgtctagagtgtcgaggcagctgcccggcgggagcagagggc
cagggggcctgctgcacccccctccgcagcaaacgcaggaaatacaccttccagtgcacc
gatggctcttcttttgtccaggaagtggaaaaaattgtcaagtgcggctgtacaaagtgt
tcttcttaa
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integrated database retrieval system
