Nothobranchius furzeri (turquoise killifish): 107382445
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Entry
107382445 CDS
T05163
Name
(RefSeq) slit homolog 1 protein-like
KO
K06838
slit 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107382445
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
107382445
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
Laminin_G_2
Laminin_G_1
LRR_5
LRR_1
hEGF
LRR_9
LRRCT
LRRNT
DL-JAG_EGF-like
EGF_CA
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
107382445
NCBI-ProteinID:
XP_015810062
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Position
sgr08:1131065..1186942
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AA seq
1237 aa
AA seq
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MCSCPNTIGDGRGRGLTAIPAHLPEGMTEIRLEQNGIKSVPPGSFISYKKLRRIDLSNNQ
ISEIAPDAFHGLRALNSLILYGNKITELPGGVFDGLVSLELLLLNANKIHCIRALVFKDL
ENLALLSLYDNKLQTLAKGTFSSLHSIQTLHLAQNPFVCDCNVKWLADFLRSNPIETSGA
RCASPLRLTNKRIAQIKSSKFRCSAKEQYHVPGTEDRRLSYECNSKPVCPAKCRCEANVV
DCSNLRLTKFPEHLPPSTEELRLNNNDLSTLEATGAFKGLSQLRKINLSNNKISEIEDGA
FEGASSVVELHLTANHLESVRGGMFRGMEGLRMLMLRNNRISCIHNSSFTGLTNVRLLSL
YDNQLSTILPGAFDSLPHLSTLNLLANPFICDCRLSWFGAWLRSRRIVTGNPRCQGPVFL
REIPLQDVAVPDFRCEAGSVLDDSRCAPGLQCPSQCTCMDTVVRCSNKHLQALPRGLPRN
VTELYLDGNQFTSIPKELATFKHLQLIDLSNNKISSLSNNSFSNMSQLTTLILSYNSLRC
IPLLALAGLHSLRLLSLHGNDISDLQQGIFSDVAFLSHLAIGANPLYCDCRLLWLSDWVK
SGYKEPGIARCAGPRGMEGKLLLTTPADKFQCQEGPCRRSTEPPINLVLHLFLTRGPNNS
LFFKNTFLFYDCSCACAYGFHGTFCEVNVDDCEDNGCDNGATCVDGVGNYSCLCPPNYTG
PFCEEEGDPCSPGRNLCQHQSTCISGATGSRCVCIPGWVGPDCSIDYNECVDHRCQNGAQ
CVDHLDGYSCLCPQGFSGEYCEVVPPPPSPCQLAPCQNGAPCDEKQGTAVCQCPPGFEGQ
SCEKLVSVNFVDRDSYVQLQDVKNWPQSNITLQVSTAEENGILLYNGDDEPFAVELHQGR
VRVTFDPGNLPATTIYSSETVNDGDFHTVELVTFDRMVNLSVDGGEPTTLDNQGHSQPVT
GEAPLYVGGLPEEVIPASRGLSSQTLNLSSFHGCIRNLYINHELQDFTRSHMKPGVVPGC
QPCQKLHCLHGICQPNTAQGPQCHCQPGWTGRHCNQPITGGLGESGIVTMATRVNPCESN
KCVRGVCVMVDAQTYRCNCERGYQGTLCNLQEDPGVSCQGLTCLHGRCEKTEDGDRCVCE
QGYTGDSCDIASPCRGEPFRDHHRLQHGTVFCQTSKPFSWVECRGQCTAETKLGVGPPSC
CAPLRVRRRRLTFECDDGTSLTQDVEKPVECGCKECV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcctgccccaacaccattggggatggtcgggggaggggcctcactgccattccc
gcccacctgccagagggcatgacggagattcgtctggaacagaacggcatcaagtcggtt
cctcccggctctttcatctcctacaagaagcttcgtcggatagacctgagtaacaaccag
atatctgagatagctcctgatgccttccacggcctccgagcgctgaactctctaattctg
tacgggaataagatcacggagctgcccggtggagtgtttgatggcctggtctctctggag
ctgctgttgctgaatgctaataagatccactgtattcgggccttggtgttcaaagacctg
gagaacctggctctgctgtcactgtacgacaacaagctccagaccctggcaaaaggcacc
ttcagctcactacacagcatccagaccctccacctggcccagaacccctttgtctgtgac
tgtaatgtgaagtggctggctgacttcctgcggtcaaacccgatagagaccagtggagca
cgctgcgccagccctctccgccttaccaacaaacgcattgcacagatcaagagcagcaag
ttcagatgctctgctaaggagcagtaccatgtcccaggcacagaggaccggcgtttgagc
tacgagtgtaacagcaagccagtgtgtcccgctaaatgtcgctgtgaagccaacgtggtc
gactgctccaacctgcggctcaccaagttccccgaacacctgcccccctccactgaagag
ctgcgtctcaacaacaacgacctttccacgctggaggccaccggagccttcaagggcctg
tcacagctcaggaagatcaacctgagcaacaacaagatttcagagatcgaggacggtgcg
tttgagggcgcctcctccgtggtggagcttcacctcacagccaaccacctggagtctgtg
agggggggcatgttcaggggcatggagggcctacgtatgctgatgctgaggaacaacagg
atcagctgtatccacaacagcagcttcacaggactgaccaacgtcagactgctctccctc
tatgacaaccagctaagcaccatcctacctggagcattcgactcgctgccccacctgtcc
acactaaacctcctggccaatccgttcatctgtgactgccgcctgtcctggttcggagca
tggctgaggagccggcgaatcgtgactggaaaccctcgctgtcagggccccgtgtttcta
cgagagatcccgctgcaggatgtagctgtgcctgattttcgctgcgaggctggctctgtg
ctggacgacagccgctgtgctccggggctgcagtgtcccagtcagtgtacctgcatggac
acagtggtccgctgcagcaacaaacacctgcaggcgctgcccagaggactgcctcgcaat
gtcactgagctgtacctggatggaaaccagttcaccagtattcccaaagagttggccacc
ttcaaacacctgcagctaatagacctgagcaacaataaaatcagctctctgtccaacaac
tccttctcaaatatgagtcagctgactacgctgatcctgagttacaactccttacgttgc
atccctctgctggcgctggctggcttacactccctgagactgctctctctccatggcaac
gacatctccgacctacagcaggggatctttagtgatgtggcattcctgtctcacctcgcg
atcggagccaacccgctgtactgtgactgccgtctgctctggctgtcagactgggtgaag
agtggctataaggagcccggtatcgcccgctgcgccggcccccgcggcatggagggcaag
ctgctgctcacaacgcccgctgacaagttccagtgtcaggagggcccttgcagacgcagc
accgaaccaccgatcaatcttgtgctccatcttttcctcactcgtggcccaaataactcc
ctattcttcaaaaacacgtttcttttttatgattgtagttgtgcgtgtgcatatggcttc
cacggcacgttctgtgaggtgaatgtggacgactgtgaggacaacggatgtgacaacggt
gccacctgtgttgatggagttggcaactacagctgcctgtgtcctcccaactacacaggt
ccgttctgtgaagaggagggagacccttgttctcctggcaggaacctgtgtcagcatcag
tccacctgcataagcggtgctacaggctctaggtgtgtatgcatccctggctgggtgggg
cccgattgcagcatagattataatgagtgtgtggatcaccgctgtcagaatggagcgcag
tgtgtcgaccatctggatggctacagctgtctctgtccacagggattcagtggtgaatat
tgcgaggtggtccctcctcccccctccccctgccaactggctccatgccagaacggcgcc
ccctgtgacgagaagcagggaactgcagtctgccagtgtccaccgggctttgagggtcag
agctgcgagaaactggtcagcgtcaactttgttgatagagattcttatgttcagcttcaa
gatgtgaagaactggcctcagagcaacatcacactgcaggtgtcgacagcagaggaaaac
ggtatcttgctctataacggcgacgacgagccctttgctgtggagctccatcagggtcgt
gttagggtcaccttcgaccctggcaacctgcctgccaccaccatttacagttctgagaca
gttaacgacggagatttccacacggttgagctggtgaccttcgatcggatggtgaacttg
tcggtggatggaggagaaccaacaaccctggacaatcagggtcacagccagccagtgaca
ggagaagctcctctatatgtaggaggcttgcctgaggaggtcataccagcctctcgggga
ctctcatcccagaccctcaacctgtccagcttccacggctgcatcaggaatctttatatt
aaccacgagctgcaggatttcacccgaagccacatgaagccgggcgtcgttccaggctgc
cagccttgtcaaaaacttcactgtcttcatggcatttgccaaccaaacactgcacagggt
ccccagtgccactgccagccagggtggacaggaagacactgtaaccagccaataacagga
ggccttggtgaatcgggtattgtcaccatggcgacaagggtcaacccctgtgagagcaac
aagtgtgtaaggggtgtgtgcgtgatggtggacgcacagacataccgctgcaactgtgag
aggggatatcaagggacgttgtgtaacctgcaggaggatccaggtgtctcctgccagggg
ctgacgtgtctgcatggccgctgtgagaagacggaggacggagacagatgcgtctgtgag
caaggatacaccggagacagctgtgacatagcgtctccctgccggggcgaaccattcaga
gaccaccaccgcctgcagcatggcaccgtcttctgccagacctccaaacccttctcctgg
gttgagtgtcggggtcagtgcaccgcagagaccaagctgggcgttggacccccctcctgc
tgcgctcctctgagggtcagacggcgccggcttacctttgaatgtgacgatgggacctca
cttacacaagacgtggagaagccagtggaatgcggctgcaaggagtgtgtgtga
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