Nothobranchius furzeri (turquoise killifish): 107384087
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Entry
107384087 CDS
T05163
Name
(RefSeq) neurocan core protein-like
KO
K06794
neurocan core protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfu00535
]
107384087
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107384087
04091 Lectins [BR:
nfu04091
]
107384087
Proteoglycans [BR:
nfu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
107384087
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
107384087
Lectins [BR:
nfu04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
107384087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
Sushi
V-set
hEGF
DUF2345
DUF3540
EGF_2
Chordopox_A33R
EGF_CA
Ig_3
Motif
Other DBs
NCBI-GeneID:
107384087
NCBI-ProteinID:
XP_015812622
UniProt:
A0A8C6PSX1
LinkDB
All DBs
Position
sgr09:complement(41434126..41480101)
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AA seq
1300 aa
AA seq
DB search
MELTRCAAERQILFALTLLLLLASGLASSIVNMRRITLPTVQQMLAGEAVLPCVFTLQTS
SSVQPPHILWTHSRPPAGGQGAPLEETVLSAKGDVIKVNKAFSGRIVLPGYAANPLNATM
EIFSLRTDDSGTYHCQVALGNHYEVDTVPLVVSGVVFHYQAPDTRYAFSFSDAQRACEEN
SAQIASPAQLWAAYHDGLASCSAGWLGDQTVRYSIQSPELGCYGHKEFSAGVRNYGKRDP
KEMFDVYCFAKELDGEVFHSSVPGRLSLSSASDRCVSLGGQLATPGQLYLAWRAGLDSCA
PGWLSDGSVRYPVSWPRPECGGSQLGVHTVTPNSTADNTSLLYDAYCYRGKVKETGSDSE
IYTSPWKPWSYLTGSSDAESAATDSSNLTAQQTTTLAGSSKDSEVSPSNWTGLVDLEEEE
TPHRNSTDPWTSESSVSFVTLQLIPGQSSFDWGELMEPGPNSEEFIRPPVRPTPAEKEVI
SKIVKSIWKPWNYLVGTGDEEGTRRPSGHIEEEEIATKATDVGSNPSSPASPGLFSWGTS
WFSSPSVEKTTSPEEDHTTHLTSSLTSFSNSPTAESVRILETSETRTFAPSSLSPEITST
KEPWITVDAETTTQQVDKREETVTSRASGRGGRGRGKKNRGEDKNRGEEKVKGEEEGSGE
ITGAEAKGEIQVSRRPVGTSKPRERPRERSRERGHRKGQSRTTTTTITMTTVSPLETTAV
TTVGTERNVSTSSAAENPSLSTSQESSQTLSISPSPSPTTATSSSYASQSDSLLEILSLP
PSPSLPSSSPPIITSPTSYTQTSSYSPSLSPSSLTSQPHISLTSQPHISLTSQSHISLTS
QPHISLTSQPHISLTSQPHISLTSQPHISLTSQPHISLTSQPHISLTPQPHISLTSQPHI
SLTSQTQTVGSVASPQTEVSDSTTDSLTTPTRVTEDGVAVNTSVGDTLTLPGPQDDEEST
WSHSVGSGALLPGSMEEENHKGGANISTTTLSPTVEVEPCVANPCLHGGKCLPQGTGYSC
YCPQGYAGENCEIDIDDCQSEPCENGGTCIDKIDSFLCLCLPSYGGDTCEKDIEGCEHGW
RKFHGHCYRYFSHRHTWEDAEKDCREHSAHLSSVLSKAEQEFINGLGHDNAWVGLNDRTV
EEDFQWTDGNELVYENWRESQPDNFFAGGEDCVVTIAHEDGKWNDVPCNYNLPYICRKGT
VLCGTPPAVENAHLIGRRRSHYDIHAVVRYQCSEGFYQRHIPTSRCRADGSWERPRIVCT
KSRRSHQYRRHHHNQHHDRRRNRRHGGEGRRVREDVHSDY
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggagctgactcgatgtgcagctgagcgccagatcctctttgctctcacgcttctcctg
ttgctcgcttcaggtttagcctcctccatagtgaacatgcgtaggatcactcttcctacg
gtccaacagatgcttgcaggcgaagccgtcctcccttgtgtcttcaccctccagaccagc
tcctccgtccagcctccacacatcctgtggactcacagcagaccaccagcaggagggcaa
ggagctcccctggaggagaccgtactttctgctaaaggtgatgtaatcaaggtgaataag
gctttcagcggccgcatcgtgctgccaggatacgctgccaatcctctgaatgctaccatg
gagatcttcagtctccggaccgacgactcaggcacttaccactgtcaggtcgccctgggc
aaccactatgaagtagacactgtgcccttggtggtgtctggggtggtgtttcactaccag
gcacccgacacccgctacgccttctcattcagcgacgcccagcgagcctgtgaggaaaac
tcagctcagattgcatctccggcccagctgtgggcagcataccatgatgggttggccagc
tgctcagccggatggttgggcgatcagactgttcgttattccatccagtcgccagagctt
ggttgctatggacacaaggagttctctgcaggagtgaggaattatgggaaaagagaccca
aaagagatgtttgatgtatactgttttgctaaagaattggacggcgaggtgtttcactcc
tccgtcccaggcagactgtcgctgtcctcagcctcagaccgctgtgtgtccctcgggggc
caactggccaccccgggccagctctacctggcgtggagggccggtctggacagctgtgcc
ccaggatggctgtctgacggcagcgttcgctacccagtgtcctggcctcgtccggagtgt
ggaggcagccagctgggagtccacaccgtcacacccaactccacggctgacaacacctca
ttgttatatgatgcctactgctaccgagggaaagtgaaggagacgggctctgactctgag
atctacacctccccgtggaagccctggagctatctcacaggctcaagtgatgctgagtct
gcagcgacagacagctccaatctgacggcacagcaaaccaccacgctcgcaggttcctca
aaggacagcgaggtctcaccttctaactggacaggactggttgacctggaggaagaggag
acccctcacaggaactccacagatccctggacctcagagtcctcagtgtcatttgtgacc
cttcagctgatcccaggacagagctccttcgactggggagagctgatggagcccgggccc
aactcggaggagttcattcgacctccagttcggccgactcctgctgagaaagaggtaatc
tcaaagattgtcaagtccatttggaaaccttggaactacctggtggggaccggagatgag
gagggaactcggagaccaagtgggcacatcgaggaagaggagattgcaactaaagcaact
gatgtggggtcaaatccttcaagtcctgcttcgcctggtttgttttcctggggaacatca
tggttcagcagtccatctgtggaaaaaaccacctcacctgaagaggaccataccactcac
ctgacatcttctttaacttccttcagcaactctccgaccgcagagagcgtcaggatcctg
gaaacctcagagactcgcacatttgctccctccagtctgtcccctgaaatcacctccact
aaagaaccctggatcactgttgatgcggagacgacaacccagcaggtggacaagagagaa
gagacggtgacatccagagctagtggaagaggagggagaggaagggggaagaagaacaga
ggggaggacaagaacaggggagaagaaaaggtgaaaggagaggaggaagggagtggagaa
attactggtgcagaagcaaaaggagagattcaagtctcacgtcgtccagttggaacaagt
aaaccaagagaaaggcctagagaaagatcaagagagaggggtcacaggaagggacagtcc
aggaccaccaccaccaccatcactatgaccaccgttagtcctctggagaccactgcagtg
accacagtcgggacagagcgtaatgtttccacttcatcagcagcagaaaacccatctctg
tccacctcacaggaatcgtctcagactctgtccatctctccatccccatctcctacaacc
gctacatcttcttcttacgcatcacagtcagactcccttttagaaatcctttctctgcct
ccatccccctcccttccatcttcctcacctccaatcattacctcacccacgtcctatacc
cagacctcctcctactccccctctctgtctccttccagcctcacatcacagcctcacatc
agcctcacatcacagcctcacatcagcctcacatcacagtctcacatcagcctcacatca
cagcctcacatcagcctcacatcacagcctcacatcagcctcacatcacaacctcacatc
agcctcacatcacaacctcacatcagcctcacatcacagcctcacatcagcctcacatca
cagcctcacatcagcctcacaccacagcctcacatcagcctcacatcacagcctcacatc
agcctcacatcacagacccagacggttggatcggttgcatctcctcaaacagaggtcagt
gacagcaccaccgactccctgactacaccgactagggtcacagaagacggtgtggctgtg
aacacctctgtaggtgatactttgactctacctggacctcaagacgacgaggagtccacc
tggtctcattcggtgggttcaggggctctcttaccaggaagcatggaggaggagaatcac
aaaggaggagccaacatcagcaccacaactctcagcccaactgttgaggtggagccctgc
gtggcaaacccatgtctgcacggtggaaagtgccttcctcagggaactggctacagctgc
tactgcccacaaggatatgctggagagaactgcgagatcgacattgacgactgccagtcc
gagccatgtgaaaatggaggaacttgcattgacaagattgattccttcctctgcctttgc
ctgccgagctacgggggagatacgtgtgagaaagacatagaaggatgtgagcacggctgg
aggaagtttcacggccactgctacaggtacttcagccaccgacacacctgggaggatgca
gagaaagactgccgagagcacagtgcacatctcagcagtgtgctgtccaaagctgagcag
gagtttattaatggtcttggacatgacaacgcctgggttggtctgaatgatcggactgtg
gaggaggactttcagtggaccgatggaaacgaactggtttacgagaactggagggagagc
cagcctgataacttctttgcgggcggagaggattgcgtggtgaccatcgctcatgaggac
ggcaaatggaacgacgtgccctgcaactacaacctgccttacatctgcaggaaagggaca
gtgttatgtgggaccccgccagcagtggagaatgcccatctgataggccggaggagatcg
cattatgacatccatgcagtggtgcgttaccaatgttctgaagggttctaccagcgccac
attcccacttcacgctgccgggccgacgggagctgggagcggcccaggatcgtgtgcaca
aaatctcggcgctctcaccagtacaggcgccatcaccacaatcagcaccacgaccgtcgc
cggaacaggagacacggaggagagggccgcagggtcagagaggatgtgcacagcgactac
tga
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