Nothobranchius furzeri (turquoise killifish): 107388813
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Entry
107388813 CDS
T05163
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107388813 (chd2)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107388813 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
107388813
NCBI-ProteinID:
XP_015820011
UniProt:
A0A8C6LMZ5
LinkDB
All DBs
Position
sgr13:24167141..24193852
Genome browser
AA seq
1811 aa
AA seq
DB search
MMKSKSKKQEDEGSTQSNASSNSASEESNHSASESGSQSESEHGSERRRSHNSESNSSSE
SESHSESESESAESKSQQTTSEVKGKQVKKKERIADVKKMWEEHPDVYGVRRSNRSRQEP
ARLNIGAGGSSDSESESPKRKSSRLKKKENIWKDDSNDDEEEEEEETSNSSDSEQEEKKV
RSRRLPARRPQAKLSVRKRQSQKGRKSKKQESSAEDEDEDDDEDDDDDDEEDTPKRQTRR
RGATKIKSYKEDQHDFETDSDDLIEMTGEAGEEQQDDDSETIEKVVDCRVGSKGATGAST
TVYTVEENGDPCEGFDPEKDEGETQYLIKWKGWSYIHNTWESMDSLTQQKVKGLKKLDNF
KKKNDELNAWLRRASPEDVEFHNCQQELTADLTKQFQIVERVISTKTGKTPGSSDFPSHS
HKTSSNEPEYLCKWMGLPYSECSWEDGALVKKKFQHCIDSFTNRNNSKTVPSKDCKVLKQ
RPRFVALKTQPSYIGDENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFL
SYLFHQHQLYGPFLLVVPLSTLTSWQREFENWAPDMNVVVYLGDVMSRKTIRDYEWVNHQ
TKRIRFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKSLMEFRSNHRLL
ITGTPLQNSLKELWSLLHFLMPDKFDSWEDFEDDHGKGRDNGYQSLHKVLEPFLLRRVKK
DVEKSLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCN
HGFLIKHPEEGESENQQENLQALVRGSGKLVLMDKLLTRLRERGNRVLIFSQMVRMLDIL
AEYLTKKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVV
IFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM
DTTGRTVLDNSSGTSNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAE
TRESDQGSSATDELLSQFKVANFSSMEEPAPEFEDRPVREWDDIIPEEQRRKIEEEEKQR
EMEDIFMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSDSETDDSDDDKKPKKRGRPRAR
KNNVEGFTDVEIRRFIKAYKKFGCPLERLEAIARDSELVDKSIADLKRLGELIHSSCVTA
VQEHEEQLKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEDEFEPLHKAVPSTPAERS
KFTLTCRAKVAHFDIDWDLQDDVQLLLGIYEHGFGNWDLIKTDPDLKLADKILPDDPSKK
PQAKQLQARAEYLLKLLKKEQDSDAASKLGEEVKVKKRKPRVKKDKLLKDDQGTKISSPR
LSDNPSEEGEVRDDGTEKPAVKKRQKKKDNKENKEKQGTAKKEKEGDKEKKAPKPRKERA
KGAKGKKAQGPVHITAGSEPIPIEGKEDDELDQETFSICKERMRPVKKALKQLDKPDEGL
SDQEQLQHTRTCLLKIGDRITECLKAYSDPEHVKIWRRNLWIFVSKFTEFSARKLHKLYK
MAQKKRSHEEEKEQKKKEDVSGRIKSFRPEASGSSRDSSGNQPSSKPPSHLSGPHGHHRE
PYNAANKRHFGSNDRGGDWQRDRKYNYPGNSNQLWQGDRHHPYDPHRYKDHYGDRRSHGD
TYRSSGGYRNNTSPRKRPYEQYSNDRDHRGQRPYYDRHSDPKRRRPEEFHTNYHQGREGP
LQDFRRMPDHRPAGPSGPEHFSRPFHSDKPPPLLDPRSPQAQKSPQDSRSPLDRPVEPSA
MTDPNWINRKT
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagcaaaagtaaaaagcaagaagatgagggatcgactcaaagcaatgcttca
agcaactctgcctcagaggaatccaaccactctgcctcggagtctggaagtcagtcggaa
agcgaacatggcagcgagaggaggagatcacacaactctgagtctaacagctcctcagag
tccgagagtcactcggagtcagagagcgagtctgcagagtccaagtcgcagcaaaccact
tcagaagtcaaaggcaagcaagttaagaagaaggagcgcatagctgatgttaaaaagatg
tgggaagaacatccagatgtgtacggagttaggaggtcgaatcgcagcagacaggaaccg
gctcgccttaacatcggagctggggggagcagcgactctgagagcgagagccctaaaaga
aaatcctcacgtttaaagaagaaagaaaatatctggaaagatgactcaaatgatgatgaa
gaggaggaggaggaggagacatccaacagttcagacagtgagcaggaagagaaaaaagtt
agatccagacgacttcctgctagaagacctcaggccaaattgtcagtcagaaaaaggcaa
tcccaaaaaggaaggaagtcgaagaaacaagaatcatcagcagaagatgaggatgaagac
gacgacgaggatgacgacgacgatgatgaggaagacactccgaagagacagactcggaga
agaggggccacaaaaatcaaaagctataaagaggaccaacatgactttgaaacagactct
gacgatctgatagaaatgacaggagaagctggtgaagagcagcaggacgacgacagtgag
accatcgagaaagttgttgactgcagagtcggaagcaaaggagctactggcgcgtccacc
acggtatataccgtagaggaaaacggggatccatgtgaggggttcgatccagagaaagac
gaaggcgagactcagtatctgatcaagtggaagggctggtcgtacatccacaacacctgg
gagagcatggactctctcacgcagcagaaagtcaaagggctgaaaaaactagacaacttc
aaaaagaaaaacgacgagctgaacgcgtggttgaggagggcgtcccccgaggacgtggag
ttccataactgccagcaggagctcacggccgacttaaccaagcagtttcagattgtggag
cgagtgatctctacaaaaacaggaaagacacccgggtcctcggacttcccgtctcacagt
cacaagacctcctctaacgagcccgagtacttgtgtaagtggatgggtttgccgtactct
gagtgcagctgggaagatggagctctggtcaagaagaagttccagcactgcatcgacagc
ttcacaaaccgcaacaacagcaagacggtcccgtctaaagactgcaaggttttgaagcag
cggccgaggttcgtcgctctgaaaacgcagccgtcgtacatcggcgacgagaacctggaa
ctgagagattatcagctggatggattgaactggttggcccactcctggtgcaggtgtaat
agtgtcatcctggctgatgagatgggactgggtaagaccatccagaccatctccttcctg
tcctacctgttccaccagcaccagctctacggacccttcctgctggtggttcctctgtcc
acgctcacctcctggcagagggagtttgagaactgggccccagacatgaatgtggtcgtc
tacctcggtgacgtcatgagcaggaaaaccatccgtgattatgagtgggtgaaccatcaa
accaaaaggattcgtttcaatgcacttcttaccacctatgagattctcctcaaagacaag
ggcgtccttgggaacattaactgggcttttctgggtgtggacgaggctcacaggttgaag
aacgatgactccctgctttacaaatcactcatggagttcaggtcgaaccacagactcctc
atcaccggcacccctctgcagaactccctcaaagagctctggtccttattacacttcctc
atgcccgacaagtttgattcctgggaggatttcgaggacgatcacggaaaaggaagagac
aacggatatcagagtcttcacaaggtcctcgagcccttcctgctccgtcgagtcaagaag
gacgtggagaagtctctccctgcaaaggtggagcaaatcctccgtgttgacatgagtgca
cagcagaaacagttttacaagtggattttaacaagaaactacaaagctctctccaaagga
acccgcggcagctcctccggcttcctgaacattgtgatggagctgaaaaagtgctgcaac
cacggttttcttattaagcatcccgaggagggagaatcggaaaaccagcaggaaaacctg
caggcgttggtgaggggcagcgggaaactggttcttatggacaagctgctgacccgactc
cgagaaagaggcaacagagtcctgattttctcccagatggtccggatgttggacattctg
gctgaatatctcacaaagaagcgatatccgtttcagaggctggacggttccataaaggga
gaaatccgaaagcaagcactcgaccacttcaatgcagaaggctcagaggatttctgcttc
ctgttgtccaccagagctggaggtttgggcatcaacctggcctcggcagacaccgttgtc
atcttcgactctgactggaaccctcaaaatgacctgcaggcacaagccagagctcaccgc
atcggacagaagaaacaggtgaacatttatcgactcgtcactaaaggaacggtggaggag
gacattatcgagcgggccaagaagaagatggttttagaccatctggtaattcagagaatg
gacaccacaggacgaacggttctggacaacagctccggaacctcaaactcaaaccctttc
aataaggaagaactgacggcgattctcaaatttggagcagaagatctttttaaggaggca
gaaggagaagagtcagaacctcaggagatggatatcgacgagatcttgaggttggctgaa
acaagagaaagtgatcaaggctcaagtgctacagatgagcttctgtcgcagtttaaggtc
gctaacttctccagcatggaagaaccggctccagagtttgaggataggcccgtgcgggaa
tgggatgacatcattcctgaggaacagcggcggaagattgaggaagaggagaagcagcgg
gagatggaggacattttcatgctgcccagaagcaggagttccaacaagcgggctcaggcc
aatgatagcgatagcgacgtcggttcgaagctgaagcaccgctcatccggctcagacagc
gagaccgacgacagcgatgacgacaagaaaccgaagaaaagggggagacctcgagctcgc
aaaaacaacgtggagggcttcaccgatgtagagatacgcaggttcattaaggcttacaag
aagtttggctgtcctctggaaaggttggaggccattgctcgagattctgagctggtggac
aagtccatcgccgacctgaagagacttggcgaactgattcactccagctgtgtgacggcg
gtgcaggaacacgaggagcagctcaaagaaaacccagttgaagccaaaggtcctgggaaa
cgacgaggaatcaatatcaagatttccggggttcaggtcaacgccaagtccatcatccag
cacgaggacgagtttgaacctcttcacaaggccgtgccctccacccctgctgagaggagc
aagttcacgctaacttgcagagctaaagtagctcactttgacatagactgggatctgcag
gatgacgttcagctcctcctcggcatctacgagcatggctttggaaactgggatctgatc
aagactgaccctgacctcaaacttgctgataagattcttccagacgatccaagtaagaaa
cctcaggccaagcagctccaggcgagagcagagtacctgctgaagctgctaaagaaggag
caggacagcgatgctgcttctaaactaggagaggaggtcaaggtgaagaagagaaagcct
cgagtgaaaaaggacaagcttctcaaagacgatcagggcaccaaaatctcctccccacgg
ctttctgataacccgtcagaggagggcgaggtcagggacgatgggacagaaaaaccggcg
gttaagaaaagacaaaagaagaaggacaacaaagagaacaaagaaaaacagggaacagcc
aaaaaggagaaggagggagacaaagagaagaaggcccccaagcccaggaaagagagggct
aaaggagccaaagggaagaaagctcaaggtccagtccacatcacagccggttctgagccc
attcccatcgaaggaaaggaggacgatgagctggaccaggagaccttcagcatttgtaag
gagcgcatgaggccggtgaaaaaggccctgaagcagctggacaagccagacgagggactg
tcggaccaggagcagctacagcacacgcgcacctgcctgctgaagatcggagacaggatc
accgagtgccttaaagcctacagtgaccccgaacatgtgaagatatggcgaaggaatctt
tggatttttgtgtccaagtttacggagttcagcgcaaggaagcttcacaagctttacaaa
atggcacagaagaagaggtcccatgaggaagagaaggagcagaagaagaaagaggatgta
tcaggaagaataaaatcattccgacctgaagcttctggttctagtcgagactcctcagga
aatcagccttcctccaaacccccgtctcacctgtccggaccccacgggcaccacagagaa
ccgtacaatgctgctaacaagaggcactttggcagtaacgaccgggggggcgactggcag
agggaccggaaatataactacccaggaaacagcaaccagttgtggcagggagaccggcac
catccgtatgaccctcatcgctacaaggatcactacggtgatcggcgttcacacggagac
acgtatcgcagctccggtggttaccgcaacaacacctcccctcggaaaaggccgtatgag
cagtacagcaacgaccgggaccacaggggtcaacggccttactacgacagacattcggac
cccaaacgaagacgtcccgaggagttccataccaactaccaccagggaagagaaggcccc
ctccaggacttcaggagaatgccagatcacagaccagcaggtccatctggaccagagcac
ttcagcaggcccttccactcagacaaaccacctccactgttggacccccgctccccacag
gctcagaagtccccccaggactcccgctcccctctcgaccgtccagtagaacccagtgcc
atgacagacccaaactggatcaatagaaagacataa
DBGET
integrated database retrieval system
