Nothobranchius furzeri (turquoise killifish): 107389069
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Entry
107389069 CDS
T05163
Name
(RefSeq) neural-cadherin-like
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_pro
Cadherin_3
EGF
hEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
107389069
NCBI-ProteinID:
XP_015820439
UniProt:
A0A9D3BYJ9
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Position
sgr13:34470837..34621716
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AA seq
2912 aa
AA seq
DB search
MIWAVLLCCLLMPAPGYQTQGRLPFFHGHIFENSPAASKVNGLSIPVKRIDAQKWCPLSG
MHFKLYGNGSEDFRVFAHHRRGNVLLKTSRVLDRETRSVYLLSIGECCQTCAPESVVYEV
ASVKVDVLDTNDHQPTLVGTDSVHISLDDTTALRSVVYKLRAGDADSGKNAELTFSSIPQ
NGTFYVVPKTGEVLLVDSILGLSSTIKFYVYARDHGWPSLTSKAVLVSVSPKRWATRPTG
TPRRVRPGRSSRALLEPGALISLNVSEEAGIGSVVTSLGPTRFQAAAYELVHPESESSPV
TVGRDSGDITISRRLDRETEPFLELTVKIQDKRGPDWFLNKVKLKITDVNDNVPEWNMKP
YPYMAVVSPEAPAGTFVYQLQAIDGDEGKSGAVEYFLSDGGDGCFAVDKKSGQVVTTGLM
FQRDREYLLSVVAIDGAGSHSAPAMLSVVAGARAPQFTNTSYAISIPENTPEGQPFLVVL
AVSFQKQRISYSLLINPSSLFSIHQETGEISLTRTLDYENDQRRYLLMVRASEEPGSLSA
AAEVQVLITDENDCVPEFLQSIYTVDGVPETVTTATSLLQVLATDCDSGLNAEITYYTLS
PDFSISPHGTVFPARRLDYERSNHLYEFVVMAVDGGDEPHSGTATVRVRMANVNDEAPEF
SQPVYRTFVSEDAGPNTLVATVLAKDPDGDGIIYSITAGNEEGNFVIDSQKGLIRLRSTP
PPKLQGLEYVLNVTTTDDNASGGPHPLTSTAQVIVGVDDVNNNKPIFEECQQYREQASVL
ENQPAGTFVLQVHAEDADEGANGKVKYGLMHRDSAMPAFRIHPDSGVIVTARRFDRERQR
EYSITVTATDWAEEPLIGICQLTVQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAA
HDDDFGTNAAITYSMSLEQPEYLQVNPVTGWVYVNQPISQRTYITRDIVATDGGNRSTSV
ELAVTITNVKNQPPQWEKDSYNVVIPENTARDTPIVTIKATSQLGDPRVTYNLEDGMVPE
TNMPVRFYLSPNREDGSASILVSEPLDYETTPFFSLQVRAQNVAAVPLAAFTRVYVNITD
VNDNVPFFTSSIYEASVTEGAQMGTSVLQVSAHDKDLGLNGEITYSLLSDSSGDHNFFRI
DPEAGIIYTEAVFDREARSSYLLEVQSEDGKESARPGKNKQPNTDTAYVRVFISDVNDNK
PVFAQRLYEVCVDENADVGLAIVTVSANDGDEGANAKLRYQITSGNKGGAFDIEPEVGTI
FIAQSLDYEQQKRYKLLVLASDGKWEDYAAVVVTVVNKNDEAPLFSMNEYYGSVTEELDG
SPVFVLQVTATDPDKDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTMDREDRAVWRF
VVMATDEEGEGLTGFTDVIINVWDINDNAPTFLCAPDNCHSNVVENSPPGTIVVEMTAVD
LDDAAVGQNAILTYRITENAHNSNNEELFAIDSSTGTVSVAAEGLDREFADSHHVVVEAR
DGGGMMGTATVTIMVSDINDHEPKFREDWCGARVPESTREDASLLELYAVDPDDDVYGQL
TFSVVAGDPEQRFYMVSNRLEQKGTLRLKTKLDFEQPGEQRFNITIKVEDSDFSSTIHCV
ILVEDDNDNAPVFGPVSHLLSPLPEDVAVGASIFQVTATDTDSGLNGDVFYSVLPNSDPY
EHFTINRAGVVTVTKPLDRETVASYELVVIATDRGKPALTGSVTVSLPLLDVNDNGPELD
AHYTPVLWENSPAPQVVWLNRSSTLLHVVDRDSPEHGPPIFLSLPSVYSTDFHLQDHGNC
SATLTTLRRFDRERQSVFRLPVIMTDSGDPPITATNTLTITIGDHNDNAHQAGEKDIYVH
SRKGRMGYAALGKVYAPDPDDWDSKTYSLETSAAKYFSLNQSSGVLTFRQNTPAGSYWLR
VGVSDGVWPDVISGVRVHIRELEEKAFMSSASLRLTGITAREFIDSNVEGKSRLQAFWDF
LSETLSVRPGSINVFSVADREEKTVDIYFHVLTDNGYLRPEKLHSVLAAHKRKLQSLLRA
NVSQVQVDECVRADCKTSGGCYTQLSISDSPSLIDSGALSLVSAKVTSAAVCGCAAREMA
HQSCSSYPSDPCLNGGTCIDTQNGYRCRCPPQLEGPNCQQTRLSFLGNGYAWFPPIRPCF
DSHLSLEFMTEEDDGLLLYAGPLATLLPGDSEDYLAIELIGGTPSLKINHGSGTLVLQLT
NVAVADRRWHRLDVRSNSKEVRFTLDRCSSAIVMEAEGVGSWVMTEDRSSCEIRGVTPNK
DRYLNGSHVLQLGGVNENMSYEYPQLQHKHYTGCIRNLLVDSKLYDLGSPAESSNTLPGC
SLIDSHCTDMEQISSCGKRGSCHWERSSFSCLCGKGFTGPHCDQAPEFSFDGRSHVQLQL
LWSLPARQTKVQVGVRTRSAAGVILSVLSQEQSEYLRLEIIQGLLAASYNLGDGDYNVTL
PSHRLDDGEWHEVELDRYGREFTLRLDRGGGRLEVTASPGQSQEIIIDPSAVMLGNSFPS
GHNHSFLGCLRDVRLNERPISLDQEQRSEGIQVVTSQGVSVGCSSDACRKHHCSPPLVCV
DLWRQHECRCPPGHMTKESSSGRVCIYTLCASRPCHHGTCVAHSPSRYSCHCSEGFRGRH
CEVALVAFHGEDSNSLSLSSMFAISICVMAFLVLMLGLFLYSCWRRHKGLKEGVYHVSAH
HGEWEDIRENVLNYDEEGGGEQDQNAFNMVELQRSLQPSPAQSLRYSYPQNTSSYPQTKL
PQDTNKKGLSNGNGSAAIALRLAIPPSEAEALSSPLTFRRSQRAFSFSSQDLARYLCEVM
RDTEHAEELGATTTPRRPSRKERSLASVHSLSSLNASQCSEVRLHAAQITRMDTFKALRA
VVCDLRGDCKAPEGQRDKLRESRGQLHCEKNV
NT seq
8739 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggctgttctgctgtgctgccttctgatgccagcacccggatatcaaacacag
ggtcgactgcctttctttcacggacacatttttgagaactcgccggcggcttccaaagta
aacggactcagcattccggtgaagcgcattgacgcgcaaaaatggtgcccgctctccggg
atgcacttcaaactgtacgggaacggcagcgaagattttcgggtctttgcccaccacagg
cgggggaatgtcttactcaaaacttccagggtcttagacagagagactcgctcggtctac
ctgctgagcatcggtgagtgctgtcagacctgcgcgccggaatcggtcgtttacgaggtt
gcgtcggtaaaagtggacgttttggataccaacgaccaccagccgacacttgtcggcaca
gacagcgtgcacataagtttagacgacaccactgctctgcgaagtgttgtttacaagctg
cgcgctggcgacgcagacagcggaaagaacgcagagttgacgtttagctccattccccaa
aatggcactttctacgttgtcccgaaaacgggagaagttttgctggttgactccatcctg
ggcctctcctctacaattaaattctatgtttatgccagggatcacggctggccctcactg
accagtaaggctgtactggtttctgtttctccaaagcggtgggccacgcgtccgaccgga
acgccgaggcgcgtgaggccaggacgctcatccagggcgctcctggagcccggcgccttg
atctcccttaacgtgtctgaagaagccggcatcggctcggtcgtaacgagcctgggtccc
accaggtttcaggcagctgcctacgagctggtgcacccggagtcggagagctctcctgtc
accgttggtcgcgacagtggagatatcacgatatcccggaggctggacagggagaccgag
cctttcctggagctcactgttaagattcaagacaaacgaggtccagactggttcctgaac
aaggtgaagctgaaaatcactgatgtcaacgacaacgtccccgagtggaatatgaagcca
tacccctacatggctgtcgtgtctcctgaggcccccgcgggaacatttgtctatcagcta
caggctattgatggtgatgagggcaaaagtggagcagtagagtacttcttgtcagatggt
ggagatggctgcttcgctgtggacaagaaatcgggccaagtggtaaccacagggctgatg
tttcagagggacagggagtaccttttaagtgtggtcgctattgatggtgcgggaagtcac
agcgcacccgccatgctctctgtggtggcaggggccagagcgccacagttcaccaacacc
agctatgccatctcaatcccagagaacactcctgaagggcagcccttccttgtggtgttg
gccgtttccttccagaagcagcggatcagctacagtctgctcatcaatcccagcagcctt
ttcagcatccatcaggagacgggcgagatcagtctgaccaggacgctggactacgagaac
gaccagcgacgctaccttctgatggtgcgagccagcgaggagcctgggagcctcagcgcc
gccgcagaggttcaggtgttgataacggatgaaaatgattgtgtccccgagttcctccag
tccatctatactgtcgatggagtgcccgagactgtaaccacggcaacatcactgctgcag
gttctggccacggattgtgactcggggttaaacgcagagatcacttattacaccctgagc
ccggatttcagcatctcacctcatgggactgtattccccgccaggcgcctcgactatgag
aggtctaaccatttgtatgaatttgtggtgatggcggtggacggcggagatgagcctcat
tctggcacagcaacggttcgtgtgaggatggcaaacgtaaacgacgaagcccctgaattc
tcccagcctgtatatcggacgtttgtctctgaggacgccggtcccaacactcttgttgcc
accgtcctggccaaagacccagatggtgacgggataatttactccataacagccggcaac
gaagaaggaaactttgtcattgacagccagaaaggcctcatccggctccgctccactccc
ccgcccaagcttcaaggcttggagtatgtcctgaatgtaacgaccacagatgacaatgca
tcgggtgggccgcaccctctcacctctaccgcccaggtcatcgtcggagtcgatgatgtc
aacaacaacaaaccaatatttgaagagtgccagcaataccgtgagcaggcttcagtgctg
gagaaccagccagcggggacttttgtgttgcaagtgcatgcggaggatgcagatgaggga
gcaaatggaaaagtcaaatacggcttaatgcacagagacagcgccatgcctgccttcaga
atccatccagactcaggagtgattgtgacagccaggcgcttcgacagggagcgccagaga
gagtattcaattacagtaacggccactgactgggctgaggagccgctcatcggcatttgt
cagctcaccgttcagatattggaccagaatgacaacagccccaagtttgagaatttgcgc
tatgagtacttcctaagagaagacaccttggttggtacgagtttcctccgcgtggcagct
catgatgatgacttcggtaccaatgctgccatcacttactccatgtcgctggagcagccc
gagtacctgcaggtcaaccctgtcactggatgggtctacgtcaaccagcccatatctcag
aggacttacatcacacgggacatcgtggccacagacggaggaaaccgcagcacttctgta
gagcttgccgtcaccatcactaatgtgaagaaccagccccctcagtgggaaaaagacagc
tacaatgtcgtcatacctgagaacactgccagagacacacccatagtgacaatcaaggca
acctctcagctgggtgacccaagagtgacctacaacctcgaagacggaatggttcctgaa
accaacatgccagttcgtttctacctctcccctaaccgtgaggatggctcggcgtccatc
ctggtgtcagagccgctggactacgagaccaccccttttttctctctccaggtccgggcg
cagaacgtggctgcagtgcctctcgctgctttcacaagagtttatgttaatattacagat
gtcaacgacaacgtgccgtttttcacgtcctctatctacgaggcctcggtaacagaaggg
gctcagatggggacttcggtcctccaggtgtctgcccacgacaaagacctgggacttaat
ggcgagatcacttattcgctactgagtgacagcagcggcgaccacaatttctttcgtatt
gacccggaagctgggatcatctacacagaggcggtgtttgacagggaggcccggagctcc
tatttgctggaagttcagtcggaggacggcaaagaatcagcacggcctggaaaaaacaag
cagcccaacacagacacagcatatgtgagggttttcatcagcgatgtcaatgacaacaag
cctgtctttgctcagcggctgtatgaagtttgtgtcgacgagaacgcagacgtgggcctg
gccattgtcaccgttagcgctaacgatggggatgaaggtgccaatgcaaagctgcgctac
cagataacgtctggtaacaaaggtggtgcttttgacattgagccagaagttgggacaatt
ttcattgcacagtcactggactatgagcagcaaaagaggtacaagctactggttctagct
tcagacggcaagtgggaggactatgctgctgttgtggtcacggtggttaacaagaacgac
gaggcaccgctgttttccatgaatgagtactatggatcagtcacggaggaacttgatgga
tcgcctgtgtttgtgttacaggtgacagccaccgacccggacaaagatgcggaccagggt
gccatccgttactccattcatggccaaggagcagagtcacattttatgatcaacgacatc
acaggggagatgtatgctcagcgcaccatggaccgggaagaccgagccgtgtggcgcttt
gttgtcatggcaacggacgaagaaggcgaaggacttactggctttacggatgttattatc
aacgtgtgggacatcaatgacaacgccccaaccttcttgtgtgcacctgataattgccac
agtaacgtggtggagaattctcctccgggaacaattgttgtggaaatgacagcggttgat
ctggacgacgcagccgtgggtcaaaacgccatcctcacataccggattacagagaatgca
cataattctaacaacgaggaacttttcgctatcgattccagtactggcactgtgtctgtg
gcagcggagggtctggaccgggagtttgctgatagccaccatgtggtagtagaagccaga
gatggcggaggcatgatggggacagccactgtcaccattatggtatcggacatcaacgac
catgagccaaagtttagagaggactggtgtggtgcccgtgttcctgagagcacccgtgag
gacgcttcactgctggagctttatgccgtggaccctgatgacgacgtgtacgggcagctg
acgttcagtgtggtggcaggagatccagagcaacggttctacatggtcagcaacagactg
gagcaaaaaggcaccctgagactgaagacaaagctggattttgagcagccgggggagcag
aggtttaacatcactatcaaagtggaggactccgacttttccagcactatccactgtgtg
attctcgtagaggacgacaatgataatgcccctgtgtttggtccagtctctcatttgctc
tcccctttgcctgaggacgtcgctgttggagccagcatatttcaggtcacagccactgac
actgactcaggtctgaatggggatgttttctacagtgtcctgcccaactcagacccctat
gaacatttcacaatcaatcgtgcaggtgtagtcactgtcaccaagccactggatagggag
actgtggcaagttatgagctggttgtcatagcaacagaccgtggtaaaccagcgctgact
ggcagtgttacggtcagcttgcccctgcttgatgtgaacgataacgggcctgagctggat
gcacactacacgcctgtgctgtgggagaacagtccagcacctcaggtagtctggctcaac
agaagctcaactctcctgcatgtcgtggacagagactccccagagcatgggccgcctatt
ttcctctccctaccctctgtgtattccaccgacttccaccttcaggaccacgggaactgc
tctgccactctcaccacgctacgcaggttcgacagggaaaggcagagcgtgttccgcctg
ccggtgatcatgactgacagcggcgacccgccgataacagccacaaacacgctcaccatc
actattggtgatcataacgataacgcccatcaggcaggagagaaagatatctacgtgcat
agccgcaagggaaggatgggatatgcagctctaggaaaggtatatgccccagatcccgac
gactgggacagcaagacctacagtctggagacaagtgcagccaaatacttcagtctgaat
cagagctcaggagtgctgactttccgacagaacactccagcaggcagctactggttgaga
gtaggtgtgtctgatggggtgtggccggatgtgatctcaggagtcagggttcacatcagg
gagctggaagaaaaggccttcatgtcgtccgcctcgctgcgtttgacaggcattacagcg
agagagtttatcgactccaacgtcgaggggaagagtcggctgcaggcgttctgggacttc
ctgtctgaaaccctgtccgtcagaccaggaagcatcaacgttttcagcgtagcagacaga
gaggagaaaacagtagacatctatttccatgtcttgactgataatggctacttgcggcca
gaaaagctgcacagtgttctcgcggcacataaaaggaagctgcagtcactcctgcgagcg
aacgtgagccaggtgcaggtagacgagtgtgtgcgtgctgactgcaagacatccggaggc
tgctacacacagttaagcatcagcgactcacccagcttgatagactctggtgctctatcc
ctggtctcggcgaaagtgacatccgcggctgtgtgtggctgtgccgccagagaaatggcc
caccaatcctgctcctcttatcccagcgacccctgccttaatggtgggacatgcatcgac
acacagaacggatacaggtgccgctgccccccgcagctcgaggggccaaattgtcagcag
acaagacttagtttccttggcaacggctatgcctggtttcctcccataaggccttgcttt
gatagccatctttcactcgagtttatgacagaggaggatgacggactgctgctctacgcg
ggtcccttggcgactcttttacctggggatagtgaagactacttggcaatagagttgatt
ggtgggacgcccagccttaaaatcaaccacggatctggaaccctggttctccagttaaca
aatgtcgctgtggctgacagacgctggcaccgcctcgatgtgagaagcaacagtaaagaa
gtgcgcttcactctggatcgatgctccagtgcgattgtcatggaggcagaaggtgtggga
tcatgggtgatgacagaggatcgctcatcctgtgaaatccgaggggtcacgcccaacaag
gacaggtatctgaatggaagtcatgtgctgcaactcggaggagtcaatgagaacatgtca
tatgaatatccacagctacaacacaaacactatactggctgtataaggaacctgctcgta
gacagcaagttgtacgaccttggttcccctgctgaatcctccaacactttgccaggctgc
agtcttattgatagccactgcaccgacatggagcagatctcctcctgtggcaagaggggc
agctgtcactgggagcggagctccttcagctgcctgtgtggaaaagggtttacaggcccg
cactgtgatcaagctccagagttctcctttgatgggcggagccacgttcagctccagctg
ctgtggtctcttccagcacgacagacaaaagtccaggtcggggttcggacacgttcagct
gcaggtgtcatcctcagcgtgttgtcccaggagcagagcgaatacctacgcttagagatc
attcagggtctgctggctgcttcttacaaccttggggatggagactacaacgtcacgctg
ccctctcatcgccttgatgatggggagtggcatgaggtggagctggatcgctatggcaga
gagtttacgctccgattggaccgaggtggggggcggttagaggtgacagcttcacctggc
caaagtcaggagatcatcatagatccgtctgccgtcatgcttggaaactcttttccttca
ggacacaaccacagcttcctgggctgtttgcgtgacgtgaggctcaacgaacgccccatc
tctctggatcaggaacagcgttcggaggggattcaggtggtcacgtcacagggcgtctct
gtcggctgctcctcagatgcttgcagaaaacatcactgctcccctcccctggtctgcgtg
gacctctggagacaacatgaatgcaggtgccctccaggtcacatgaccaaagagagctcc
tcaggccgagtgtgcatctacacgctctgcgccagtcggccgtgccaccacggcacgtgc
gtggctcactcgccgtctcgctactcgtgccactgcagcgagggcttccggggacggcac
tgcgaggtggcgctggtcgcgttccacggcgaggacagcaacagcctcagcctcagctcc
atgtttgccatcagcatctgtgtcatggcctttctagtgttgatgctggggctgtttctc
tactcctgctggaggagacacaagggcctcaaagagggcgtttaccacgtgtctgcacac
cacggcgagtgggaggacatccgggaaaatgtgctcaactacgacgaggaaggtggaggt
gaacaggaccagaatgccttcaacatggtggagctgcagcgctcccttcagcccagccct
gcacagtccctccgctacagctatccacaaaacaccagctcctacccacagactaagctt
cctcaggacaccaacaaaaagggtttgtccaacggaaatggcagcgcagcgattgccctg
cgtctggccatcccgccatcagaggcggaagccttatcctcacctctgaccttccgccgc
tctcagagagccttctccttctccagccaagacttggctcgctacctttgcgaagtcatg
agggacacagagcacgccgaggagctcggcgccacgaccacacctcgccgtccctccagg
aaggagcgcagccttgcctcagtgcactcgctcagctcgctcaatgcatctcagtgctca
gaagtcaggcttcacgctgcccagataacccggatggacacgttcaaggccctccgggct
gtggtgtgtgatttaagaggggactgtaaagctccagaaggccagagggacaaacttaga
gagagcagagggcagctgcactgcgagaagaacgtgtga
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