Nothobranchius furzeri (turquoise killifish): 107391284
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Entry
107391284 CDS
T05163
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107391284 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107391284 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfu00535
]
107391284 (agrn)
Proteoglycans [BR:
nfu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107391284 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
SEA
CFAI_KAZAL
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
107391284
NCBI-ProteinID:
XP_015824000
LinkDB
All DBs
Position
sgr15:complement(33299525..33684781)
Genome browser
AA seq
2096 aa
AA seq
DB search
MGSQRRLQAGRTALLLAGLLLPLWQPCVASCPEKDLEDREEEANIVLTGTVDEILNVDPV
HNSYSCKVRVWRYLKGKSSVNREILLDGGHKVMIGGFGNPRICDNQVATGDTRIFFLNLP
QQFVEQKNELMLNSSLMRITLRNLEDVEHCVEDKPPHFTPAQPPDGCRGMLCGFGAMCER
DPTDPAKGKCVCKRAECPSLVAPVCGSDSSTYSNECELEKAQCNTQRRIKVLRKGPCSLK
DPCTDVTCSYGSTCVQSSDGLSAKCMCPLGCDGKPVQTVCGSDGKDYRNECELHQHACKN
QKNIRVQYQGHCDPCKDMRNSLNTICRAEASTRQPQFFSLPEACPPADELCASNGQTYKS
ECAMTASGIQKDVKLRRVHAGRCRSKEDCTEKCLFNSVCVVEEPGSRCSCDPIDCDGAYK
PLCGKDGRTYNNDCLRRKAECLSRSPIPVGHQGPCDLNVPSPCVNKVCDYGALCVVKNAE
PVCECLEACPQTPDPVCGSDGQSYGSPCEMRAMGCALQKAIHIQHRGPCDEACANCSFGA
ICDAQSGQCVCPSECIESHQPVCGSDGATYNSECELHVRACKEQTDLRVVSQGECRTCGD
TVCAWGARCVENKCECQQCAGEAFSPVCGSDGNTYDNECELRRSSCIQKKKIDAAKPGSC
DEDCGSGASGSGAESCEQERCVAYDGVWDEDVEGGPCFCEFSCESVPQNLVCGSDGKTYD
NECALKHARCLMKKHLMVQNLGPCEASPMVAPTELTSAQHCGLSLYGCCSDNTTAALGVE
QAGCPSVCQCNVHGSYKGTCEPTTGQCSCKPGVGGQKCDRCEPGFWNFRAIVTENMSGCT
PCSCDPIGSVRDDCEQMSGLCSCKTGVKGLKCNVCPDGSKMGMNGCDNGPGAPKSCKELV
CSFGATCIEVNGQAHCECPPTDCDLKNKTKVCGSDGVTYADQCQLRTIACRQDEDITVQH
FGQCTESISELADRPTPNLPTAAPSSAVDTAITATTPYPNNMVWAIPPPITAEQQFIDSP
QTTTDFSITTHSRVRSFHRLATQHQGPHPTAAASNTPPPRSSPVPTTSVSPAFDGSGSGE
PSGDEQADEEDDGSAVTSEASGGDETVGSTVANITAPSAEDWSSCDNTEFGCCPDGKTPS
STPEGANCPPTMKFSGTLNLDQVEGQEIFHTPEMDDPKSELFGETARSIESALNELFRKS
PLRKDFMGVRVSKLEPSRSIQALVEAHFRPETRYTVEDIVRALLRQLKASKDTSISVKKP
EDENIRFTNYGLSSTAIFTTTITTTPAVTTAAPITTTRLPATSPYITRRPPGTSHRPFPS
RRTTTTAAPVTTPLPTTTASVATTTTPQTTTFSNIRGRHQHKSKKPCDSHPCLHGGTCED
DGSDFSCKCPAGRGGAVCEKVIKYFIPSFGGQSYLAFQTMSAYHTVRIAMEFRASEMTGL
LLYNGQMRKKDFISLALVNGKVELKFNTGSGTGTLISKVLINQGRWHQLVVTRNRRSAVL
SIDNEPHIQGESPQGTDGLNLDTELFIGGVTEELKQDVRERTGVAAGLVGCIRMLDVNNR
MLNLQESGGDSLFGSGVGECGNNPCQPNPCKNAAECQVKEAEMFHCKCRQGFWGPTCADI
HDPCVPNKCHVTSQCKALPEGGYKCECPMGREGRRCERVAQRRGAYMPLFSGDSYLELKG
LHLYGHDLRQKISMTVVLMANDSNGLIFYNGQKSDGKGDFISLSLNNGILEFRYDLGKGP
ATIRSKEPIQLRVWNTINLERSLRKGEIMVNKKDPVRGESPKSRKNKHTDLNLKESLFVG
GAPDYSKLARVAALTEGFKGTIQKIMLMSTPILREENALNSSNVAMFQGHPCSREPCQNG
GRCTPQLDSYECGCLPGFSGENCQNTIHEKSAGETEAIAFDGRTFIEYHNTVTRSQLTNE
IPDPESLENPSDQSEKALLVNKFELSIRTEATQGLLLWSGKGVERSDYIALAVVDGHVQM
TYDLGSKPVVLRSSVRVDTNSWIRIKASRALRDGSLQVGNEAAVTGSSPLAATQLDTDGA
LWLGGLEELAVARRLPKAYSTGFVGCIKDVVVDGVEVHLVEDALNSPKILHCSATQ
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgggttcccagcggaggctccaggccggccggacagcgctgctcctggcggggctgctc
ctgcctctgtggcagccctgcgtcgcgagttgtccggagaaagacttggaggaccgggag
gaggaagccaacatagtcctgaccggaaccgtggatgaaatccttaacgtggacccggtg
cataactcatattcttgcaaggtcagagtgtggcgttacttgaaagggaagtccagcgtc
aaccgtgaaatcctcctggatggaggccacaaagtgatgattggtggattcgggaacccc
cggatctgtgacaaccaggtagccacgggcgacactcgcatatttttcctcaaccttccc
caacagttcgtggagcaaaagaacgaactaatgctcaactcgagtttgatgaggattact
cttcgcaacctggaggacgtggagcactgtgtggaagacaaaccgcctcacttcactccc
gcccagcctcctgatggctgcagggggatgctgtgcggcttcggcgctatgtgcgagcgc
gacccaacggacccggccaagggcaagtgcgtctgcaagagagctgagtgtccatccttg
gtggctcctgtttgtggctcggactcgtccacctactccaacgagtgtgagctggagaaa
gcccagtgcaacacccagcgacggatcaaggtgctacgcaaggggccgtgctctctgaag
gacccctgtactgacgtgacctgcagctacggtagcacctgcgtccagtcttcagacggc
ttgtcggctaaatgcatgtgccccctcggctgcgatggcaaaccagttcagactgtgtgt
ggcagcgatggaaaggactaccggaacgagtgtgagctccaccagcatgcctgcaagaac
cagaagaacatacgtgtgcagtaccagggacactgtgatccctgtaaagacatgaggaac
agcttgaacacgatatgccgagcggaggccagcacgcggcagcctcagttctttagtctg
cctgaggcctgcccgcctgcggatgagctgtgtgccagcaacggtcagacctacaagagc
gagtgtgccatgacggcatcgggcatccagaaagatgtcaaactgaggagggtccatgca
ggacgatgcagaagcaaagaggactgtacggaaaagtgtttgtttaattctgtgtgcgtg
gtggaagagccgggctcccgctgctcctgtgatcccatcgattgcgacggcgcttacaag
cctttatgcgggaaggacggacgcacctacaacaacgactgtttgcgacgcaaggcggag
tgtctgagcaggagccccatccccgtcggacaccaggggccttgtgatctcaacgtacca
agcccctgtgtgaataaggtgtgcgattacggagcactgtgcgtggtcaagaacgccgag
ccggtgtgcgagtgcctggaagcctgtcctcagacgcccgaccccgtgtgtggatctgat
ggccagagctacggcagcccctgtgagatgcgggcgatgggttgtgccctgcagaaggcc
atccacatccaacacagagggccgtgtgacgaagcgtgcgctaactgctcctttggagcg
atctgcgacgcccagagcggacagtgtgtgtgtccgtcggagtgtatcgagtcccaccag
cccgtgtgcggcagcgacggcgccacctacaacagcgagtgtgagctgcatgtgcgagcg
tgcaaagagcagacggacctgcgggtggtcagccagggagagtgcagaacgtgtggcgac
acggtttgtgcctggggtgcccggtgcgtggagaacaagtgcgagtgccagcagtgcgcc
ggcgaggcgttctccccggtgtgtggtagtgatggcaacacctacgacaatgagtgtgaa
ctccgcaggtcctcctgcatacagaagaagaaaattgatgcagcgaagcccggcagctgt
gatgaagattgtggttccggggcgtcgggttcgggcgcagagagctgcgaacaggagcgc
tgcgtggcatatgacggcgtttgggacgaggacgtcgagggcggaccttgtttttgtgaa
ttcagctgtgagagcgtgcctcaaaacctggtgtgcggctctgatggaaagacctacgac
aacgagtgtgcgctaaagcacgccagatgtttgatgaagaagcacttgatggttcaaaac
ctggggccctgtgaagcgagtccaatggtagctccgaccgagctgacgtccgcccagcac
tgcggcctgtcgctgtacggctgctgctccgacaacacgacggccgctttaggagtcgaa
caggccggatgtcccagtgtctgtcagtgtaacgtccacggctcctacaagggtacctgc
gagccgaccactgggcagtgctcctgtaagcccggtgttgggggacagaagtgtgaccgc
tgtgaaccgggcttctggaacttccgtgccattgtgactgaaaacatgagcggctgcacg
ccgtgcagctgcgatcccatcggttcggtccgggatgattgcgagcagatgtcgggcctg
tgctcctgcaagacgggagtgaagggcttgaagtgcaacgtgtgcccagatggaagcaag
atgggcatgaacggctgcgacaacggacccggagccccaaagtcatgcaaagagttggtt
tgcagctttggagcaacttgcattgaggtgaacggccaagcccactgtgagtgcccgcca
actgactgcgatctgaaaaacaaaactaaggtgtgtggctcggatggggtgacctatgcc
gaccagtgccagctgaggaccatagcctgcaggcaggacgaggacattacggtgcaacac
tttggacagtgcacagaatccatctctgagctagcagaccgacccacccccaaccttccc
accgccgctcccagctcagctgtcgacactgccatcaccgccaccacaccttaccccaat
aacatggtgtgggccatcccgcctccaataacggccgaacagcagttcatcgattcgcct
caaaccaccaccgatttttccatcaccacccacagccgcgtacgatccttccaccgcctt
gccacccagcatcaggggccgcatcccaccgccgctgccagcaacacccctccaccccgc
agcagtcctgttcccaccacctccgtctcacctgcttttgatggctcaggcagcggggag
ccaagcggtgacgagcaggccgacgaggaagatgatggcagtgccgtcacatcagaggcc
agcgggggagacgagaccgttggttccaccgtggcaaacatcactgcacccagcgctgag
gactggtcatcctgtgataacacagagtttggctgctgtcccgatggcaagacaccatcc
agcaccccagagggcgccaactgtccccccaccatgaagttctctggcaccctgaacctg
gaccaggtggaaggccaggagattttccacacacctgagatggacgacccaaagtctgag
ctgtttggagagacggcccgcagcatagagagcgctctaaacgagttgttcaggaagtcg
cctttgcgcaaagacttcatgggggttcgcgttagtaaactagagcccagccgctccatc
caggctctggtggaagcccacttcagaccagagacgaggtacaccgtggaggacatcgtg
agggccctgctgagacagttaaaggcttccaaagacaccagcatctccgtgaagaagccg
gaggatgagaatatccgcttcactaattatggcttgtccagtaccgccatctttaccacc
accatcacgaccacccctgcagttaccaccgccgcccccatcaccaccaccaggcttccc
gccacctccccctacatcacccgtcgcccaccaggcacgagccacaggcccttccccagc
agacgcaccaccaccacggcagcgcccgtcaccacgccgctccctaccaccaccgcatcc
gtcgccacgacaacgacaccgcagaccaccactttcagcaacatccgtggaagacatcag
cacaagagcaagaagccctgcgactcccacccctgtctccacgggggaacctgcgaggac
gacggcagtgacttcagctgcaagtgtcccgccgggcgaggcggggcggtgtgtgagaag
gtgatcaagtacttcatcccttcgttcggtggtcagtcctacttggccttccagacgatg
agcgcgtaccacacggtccgcatcgccatggagttccgggcgtccgagatgaccggcctg
ctgctctataacggtcagatgagaaagaaggacttcatctctctggcgctggtcaacggc
aaggtggagctcaagtttaacaccggatcgggcacaggcactttgatcagcaaagttcta
atcaatcagggacgctggcatcagctggtagtgacacgcaaccggcgaagtgctgtgctg
agcatcgacaacgagccgcacattcagggtgaaagcccccagggcaccgacggcctcaac
ctcgacacggaactgttcatcggaggcgtgacggaggagctgaagcaggacgtgagggag
cgaaccggggtcgccgcgggcctggtgggctgcatccgcatgctggacgtcaacaaccgg
atgctcaacctgcaggagagcggaggcgacagtctgtttggcagtggagtgggtgaatgt
gggaacaacccctgccagcccaacccctgcaagaacgccgcggaatgccaagtcaaggag
gctgagatgttccactgcaagtgccgccaaggattctggggtccaacgtgtgctgacatc
catgacccgtgtgtacccaacaagtgccacgtgacttcccagtgtaaggcactgcctgag
ggaggatacaagtgcgagtgtcccatgggacgggaaggaaggcgctgtgagagagtggct
cagaggaggggggcttacatgcctctcttcagcggagactcgtacctggagctgaagggg
cttcatctttacgggcatgatctgcgccaaaaaataagcatgaccgtggttctcatggcc
aacgactccaacggtttgatcttctacaacggacagaaatcagatggaaagggagacttc
atctctctatcgttgaataacgggatcctggagtttcgatacgacctgggaaagggacca
gctaccatcaggagtaaggaacccatccagctgagggtgtggaacaccatcaacctggag
cgctcccttcgcaaaggagagatcatggttaacaagaaggaccccgtccgaggagaatca
cctaaatcacgcaagaacaaacacacggatctcaacttgaaagagtctctttttgtcggc
ggcgctcccgactacagcaaactagcgagagtcgcggcactcacagagggattcaaggga
acgatccagaagatcatgctgatgagcacccccatcctccgggaggagaacgctttgaac
tccagcaacgtggccatgttccagggccacccgtgttcccgtgaaccctgccagaacggc
ggccgctgcacccctcagctggacagctacgagtgcggctgtctgcctggtttctcaggg
gaaaactgccagaacaccatccacgagaagtccgccggagagacggaggccatcgccttt
gatggacggactttcatcgagtaccacaacactgttacgaggagccaactgaccaatgag
atcccagatcccgagtctctggagaacccatctgaccagagtgaaaaggctctgctggtg
aacaaatttgagctcagcatccggaccgaggcaacccagggtttgctgctttggagcggc
aaaggcgtggagcgctccgactacatcgccctagctgtcgtggacggacacgtccagatg
acgtacgacctgggctccaaacccgtggtgctgcgatcgtcggtgcgcgtcgacaccaac
agctggatacgcatcaaagccagcagagctcttcgagacggctctctacaggtcggcaat
gaggcagcagtaacagggtcatcacctttagcagccacacagctggacacagacggagcc
ctctggttaggtggtctggaagagctggcagtggcacgtcggttgcccaaggcctacagc
accggctttgtcggctgtatcaaagatgtggtggtcgatggagtggaggtccacctggtg
gaggacgccttaaacagccctaaaatattacactgttccgccacccagtaa
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