Nothobranchius furzeri (turquoise killifish): 107391407
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Entry
107391407 CDS
T05163
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04020
Calcium signaling pathway
nfu04260
Cardiac muscle contraction
nfu04261
Adrenergic signaling in cardiomyocytes
nfu04270
Vascular smooth muscle contraction
nfu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107391407
04020 Calcium signaling pathway
107391407
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
107391407
09153 Circulatory system
04260 Cardiac muscle contraction
107391407
04261 Adrenergic signaling in cardiomyocytes
107391407
04270 Vascular smooth muscle contraction
107391407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107391407
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107391407
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
PKD_channel
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
107391407
NCBI-ProteinID:
XP_015824197
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Position
sgr15:complement(39020660..39055905)
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AA seq
1955 aa
AA seq
DB search
MYEESRRSSAHNGYTKSVDGEREGGEGEEKEGGGEADGGGEGGEGEEKDPEWDEELDGEN
GGGVKMTRTNTLHSTTSSTGTQRRRGQHAKKQVQGTNQVQRAPRALFCLKLNNPIRQAAL
HIVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYIFLIIFTVETFLKI
LAYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTTKSTGEQATTHHMPGKPGGLDV
KALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGR
MHRTCYYIHTDNFVEDEPVPCAFAGHGRQCSVNGSECRGRWDGPNGGITNFDNFFFAMLT
VFQCITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKA
KARGDFQKLREKQQMEEDLCGYMDWITQAEDMDELDEDGNTRPSLGDLSDKKRGKFGWFS
HSNETHASLPASETASENTENIDEEHTNCCQACCARMMKISCCRTLRRWNRVCRRNCRTA
VKSVTFYWLVLLLVFLNTSLSASEHYNQPEWLTQVQDIANKVLLSLFTVEMLLKMYSLGL
AHYFVAFFNRFDCFVVCGGIIETILVELDIMPPLGIAVLRCVRLLRIFKVTRHWTALSNL
VASLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCF
QILTGEDWNVVMYDGIMAYGGPVFPGMIVCVYFVILFICGNYILLNVFLAIAVDNLAGGD
GEDKKKDKNKEHAEEEPEGEVKVDIDEDTEYEEDEELPEGDEGLFFDLSDIHQCILGYAD
YAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSSAISVVKIL
RVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYR
CTDEAKSTPEQCKGTFVVYKDGDVSHPMVRQRIWLNSDFNFDNVLMGMMALFTVSTFEGW
PALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFREQGEQEY
KNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTGFEYVMFVLILLNTVTLA
VQHYEQSKTFSDVMDILNMVFTGLFTAEMLLKLLALRLRHYFVDAWNSFDALIVVGSVVD
IVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLNKGEGIRTLLWTFIKSLQALPYVALLIA
MIFFIYAVIGMQTFGKIAMQDNTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPG
KRCDPESDYEPGEEFSCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILG
PHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPL
NADGMVTFNATLFALVRTALKIKTEGTWLVLSLGAGLWFLAHRLQGTWCEAEGSFKNTRF
CKRLSLQLCKAGLKTLQDLGPEMRLALNKDLEEEEEEEEEEEEAMLEDEMAENLSYKAEN
GFGAETRRGSMLTPSGDSGASNGGLIHRVGSLTKTVNRNEHEEHLHRGDSLRSSVNRHRR
SSVKNGLLDHVHKRPSHYKHGRRDSRDQSWRNGDLEPYGEQGYTSREEDNESITSRDRHY
PDEIRDHYDDPSPYTNSSYGSSFSSSRRTTRRRLLPATPTGRKPSFNIQCLRRQGSSDDL
PIPGTYHPTSPPRRAQAYSSHHSSGGSSAASSTSWAKPCPRRGRLLYAPLILVEEEGSPP
WGRDGGPGGEGKRGGAGRGAADRPAWYSGPAGTSAPPPYRAYTTLRVPSQLGAPFTEKRG
SADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLSSGSHDFLG
TIADDPAALYSDDEPIRTNREEEELADEMACVTSF
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggagagccgaagaagtagcgctcataacggctacaccaaatcagtggatggg
gaacgtgaaggaggagagggggaagagaaagaggggggaggagaggcggatggaggagga
gagggaggagaaggggaggaaaaagacccggaatgggatgaggagctggatggggagaat
ggtggcggggtgaagatgacgagaaccaacactcttcactccaccaccagttccactgga
acacagaggagaagaggacaacacgcaaagaaacaggtgcagggcactaatcaggtccag
cgagccccacgtgctctgttctgtctgaagctcaacaacccgatccgccaagccgcgctc
cacatcgtggagtggaaaccctttgacatcttcatcctgttagcaatctttgctaactgc
gtcgctctgggagtttccaaaccgtttcccgaggacgactccaactccaccaaccatgac
ctggaacaagtggagtacatattcctcatcatcttcacagtggagaccttcttgaagatc
ctggcctacggactggtgatgcaccccagctcctacattcggaacggctggaacctgctc
gactttgtcatcgtcattgttgggctgttcagtgttgtactggagacgatgactactaag
tcaacgggcgagcaggcgaccacacatcacatgccaggaaagccaggaggtttagatgtc
aaagctctgagagcttttagggtgctgcgacccctcagactggtttctggagttcccagt
ctgcagatcgtgctgaactccatcatgaaggccatggttcctctgcttcatatcgctttg
ttggttctctttgtcatcatcatctacgccatcatcggcctggagcttttcatcggacgg
atgcacaggacctgctactacatccacacggataactttgtggaggatgaaccggtcccg
tgtgcgttcgccggtcacggccgtcagtgctctgtgaacggctctgagtgtcgtggaagg
tgggatggacccaacggtggaatcaccaactttgacaacttcttctttgccatgctgaca
gtgtttcagtgcatcacaatggagggatggaccgacgtgctctactggatgaacgatgct
attggattcgagttgccgtgggtgtacttcgtcagtctggtgatttttgggtctttcttc
gttctcaacctggttctgggagtcctcagtggagagttcagcaaggaaagagagaaggca
aaagctcgtggagatttccagaagttgcgcgagaagcaacagatggaagaggatctgtgt
ggatacatggactggatcacacaggcggaggacatggacgaactggatgaggacggaaac
acacgaccgtctctcggggacctgtctgataaaaagaggggcaagtttgggtggttcagt
cactccaatgagactcatgcgagtcttcctgccagtgagacggcttctgagaacacggag
aacatcgatgaggaacacaccaactgctgccaggcctgctgcgctcggatgatgaagatc
agctgctgtcgaacgctgcggcgctggaatcgagtctgtcgtagaaactgtcgcacggcc
gtcaagtcggtgactttctattggctggtccttctactcgtcttcctcaacacatctctg
agtgcctctgagcactacaaccaacctgagtggttgacacaggtccaggatatcgccaac
aaggtgctgctgtctctcttcacggtggagatgctgctgaagatgtacagtttgggtctg
gctcattattttgtggcgttttttaaccgtttcgactgcttcgtggtgtgcggcggcatc
atagagaccatcttggtggagctggacatcatgcctcctctggggattgctgtcctgcgc
tgtgtccgcctgctgcgcatctttaaggtcactcgccattggacagctctgtccaacctg
gtggcgtccctgctcaattccatgaaatccattgcctccttgctgctccttctcttcctc
ttcctcatcatctttgcgctgctcggcatgcagctgtttggagggaagttcaactttgat
gagacgcagaccaaacgaagcacatttgatgcctttccccaggcattgctcacatgcttc
cagatcctgacaggtgaggactggaatgtggtcatgtatgatggcatcatggcatacggt
ggcccagtcttcccagggatgatcgtctgtgtttacttcgttatcctcttcatttgtggt
aactacatcctgctaaatgtcttcttggccatcgctgtggacaatctggctggaggagat
ggagaagacaagaagaaagataagaataaggaacatgccgaggaggagcctgaaggagaa
gtgaaggtggacattgatgaagacactgagtatgaagaggatgaagagcttcctgaggga
gatgaaggtctgttttttgatctttcagatattcatcagtgtatcctgggctatgcagac
tacgcctttaccagcatcttcaccgtggagattctgctgaagatgacggtccacggagcg
tttctccaccagggctccttctgcaggaactggtttaacctgttagacctgctggtggtc
agcgtgtcgctggtctccttcttcctacactccagcgccatctcagtggtgaagatcctc
cgagtcctacgggtgctgcgacctctgagagccatcaaccgggccaaaggcctgaagcat
gtggtccagtgtgtgttcgtggccatcagaaccatcgggaacatcatgatcgtcaccacg
ttgctgcagttcatgtttgcctgcatcggagtccagctcttcaagggtaaattttatcgc
tgcacagacgaggccaagagcactcctgaacagtgcaaagggaccttcgtggtgtacaaa
gatggagatgtgagccaccccatggtcagacagcggatctggctgaacagcgactttaac
ttcgataacgtgctgatgggcatgatggcccttttcaccgtctccaccttcgagggctgg
cccgcgttgctgtacaaggccatcgatgccaacggagagaactccggtcccatctacaac
tacagagtggagatctctattttcttcatcgtctacatcatcatcatcgccttttttatg
atgaacatcttcgtgggttttgtcatcatcacctttagagagcagggagaacaggagtac
aagaactgcgagctggacaagaaccagcgtcagtgtgtggagtacgccctgaaggctcag
cccctcaaactttacatccccaaaaacccggttcagtataagttctggtccatcatcaac
tcgacgggattcgagtacgtgatgtttgtcctgattcttctcaacaccgtgactctggcg
gttcagcactatgagcagtccaagaccttcagcgacgtcatggacatcctcaacatggtc
ttcactgggctcttcacagcggagatgctcctgaaacttcttgctctcagactgcggcac
tacttcgtggatgcctggaactcgtttgatgctctgattgtagttggcagcgtggtggac
atcgtagtcaccgagttcagcagtggagaggacagctcccgcgtgtccatcacctttttc
cgtctcttccgagtgatgagattggtcaagctgctgaataagggggaggggattcgtacg
ctgctgtggacgttcatcaaatcgctacaggccctgccgtatgttgctctgctcatcgcc
atgatcttcttcatctacgcggtcatcggcatgcagacatttgggaaaatagcgatgcag
gacaacactcagatcaacaggaacaacaacttccagacatttcctcaggctgtcctcctc
ctcttcaggtgtgccaccggtgaggcgtggcaggagatcatgttggccagtcttccaggt
aaacgatgcgatccggagtcggactacgagccaggagaggagttcagctgcggcagcaac
ttcgccatcgtgtacttcatcagcttcttcatgctctgtgctttcctgatcatcaacctg
tttgtcgccgtcatcatggacaacttcgactacctgacacgtgattggtcgattctgggg
ccccatcacctggatgagttcaagaggatctggtctgagtacgatcccgaggccaaaggt
cgaattaaacatctggatgtggtggcgctgctccggaggattcagcctcctctgggcttc
gggaagctctgtcctcacagagtcgcgtgtaagcggctggtggccatgaacatgcctctg
aacgcggacgggatggttaccttcaacgccacactctttgctctggttcgcaccgcgctc
aagatcaagacagaaggtacttggcttgtcctgagtctgggcgccggtctgtggttcctg
gctcataggctacagggcacttggtgtgaggctgaaggttcctttaagaacacacggttc
tgtaaacgtttgtccctgcagctctgtaaagctggtctgaagactctgcaggatctgggc
ccagagatgcgtctggctctgaacaaagacctggaggaggaggaggaggaggaggaggaa
gaggaggaggccatgctggaggacgaaatggcggagaacttatcttataaggctgaaaac
ggatttggagcggagacccggcgcggctccatgctgacaccttctggtgatagcggcgcc
tctaatggtggtctgatccatcgagtgggctcactcaccaagacggtgaataggaacgaa
cacgaggagcatcttcatcgtggagacagtctgaggtcatcagtgaatcgccatcggcgc
tcctctgtgaagaacggcctgctggaccatgtccacaagagaccgtcacactacaaacat
ggaaggagggactccagagaccagtcctggaggaacggagatctggagccgtacggggag
cagggttacaccagcagagaggaggacaacgagagcatcacctccagagacagacattat
cctgatgagatcagggaccattacgatgacccctccccctacaccaacagcagctatggt
agcagcttcagcagtagcagaagaaccacccgcagacgcctgcttcctgccacgcccaca
ggtcggaaaccgtccttcaacattcagtgtctaaggcggcagggcagcagtgatgacctg
cccattcccgggacgtaccacccaacatcacccccacgccgtgctcaagcgtacagttcc
caccactcatccggaggctcctcagcagcctcctcgacttcctgggcaaagccgtgtcct
cgccgtggccgcctcctctatgctcctctcatcctggttgaggaggagggcagccctccg
tggggtcgggatggaggcccagggggtgaggggaagagaggaggagcaggacgaggtgca
gcagacagaccggcgtggtacagtggccctgcagggacatcagctccgcccccgtaccga
gcgtacaccaccctcagagttccgtctcagcttggtgctcctttcacggagaaacgagga
tcagcagacagcctagtggaggcggttctgatctcagaaggactcggtctttacgcccga
gacccaaagttcgtggcattcgcgaagcgggagattgcagatgcgtgtcacatgacagtg
gatgagatggagtctgcagcgagcgacctgctgagctccgggagccacgacttcctcggc
accattgcagacgacccagcggcgctgtacagcgacgacgagccaatcaggacgaaccgc
gaggaggaggagctggctgacgagatggcctgtgtgacgtcattctga
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integrated database retrieval system
