Nothobranchius furzeri (turquoise killifish): 107393271
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Entry
107393271 CDS
T05163
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107393271 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Xan_ur_permease
Motif
Other DBs
NCBI-GeneID:
107393271
NCBI-ProteinID:
XP_015827004
UniProt:
A0A9D2XL22
LinkDB
All DBs
Position
sgr17:29072376..29205543
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AA seq
2515 aa
AA seq
DB search
MEQIPGLSLGRSLVLVFCFIQLSHALQCVNDKAPCVNNATCLTFTNGTEYCRCAAGFLGE
YCQHKDPCQPGYCLNGGNCSVSMSAGVPVPGSATCTCPLGYTGQHCQTPQNSTCYPNNPC
ANRGVCTLLSLDKYRCECTKGWTGQRCEHEDSCLSSPCANGGRCSSQPGGSYTCSCPPGY
KGPRCLNDTDECADTPSPCQNEGVCVNTPGFYRCICKPGFTGLQCESSYIPCSPSPCLNG
GTCHQTSETTYSCHCLQGFNGTNCENNIDDCPNHHCANGGTCIDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLVGSYVCVCVNGWSGPDCSQNIDDCATAACSAGSTC
IDRVASFICHCPPGKTGLLCHRDDACISNPCREGSHCDTNPVTGMFNCNCPPGYIGSTCN
IDRNECNMGSNPCEHSGTCVNTDGSFTCNCVRGYTGPRCEQDVFECGSNPCQNDGTCLDR
IGEYTCICMPGFEGTHCEIEVNECMSSPCLNQGNCVDQVSRFVCECPAGFSGEMCQIDID
ECSSTPCLNGAKCIDRPNGYDCECAEGFTGLLCEENINDCNPPPCHHGVCKDGIATFSCE
CSPGYTGSICNLPVQECLSNPCQNRGRCVDRVNAYQCNCQPGTSGVNCEVNENDCASNPC
EYGECQDGINEYKCVCTPGYTGDRCDVEINECSSNPCMSGGTCVDKVNGFHCLCPPSTHG
PFCLSGIDHCVSQPCVRGKCIEQQHGYQCVCDAGWVGPHCDQEKDECQPNPCLNGGGCLD
RYNGYTCQCKPGFRGVNCEKNIDECASGPCQNHGVCKDGINSYTCQCSSPFTGKHCEVEQ
DPCASHPCERGGVCLPSPDYTSYTCKCPPGWQGARCNEDVNECVRTPCKNGGHCKNTQGS
YICKCQLGYSGHNCQTDIDDCSPNPCLNGGLCVDNVANFSCDCRAGFEGERCGIEVDECA
SQPCRNGGTCHDYVNSFVCRCRPGFNGIQCENNIRECTERSCLNNGTCIDGINTFFCRCR
DGFYGHFCEYEHNECDSQPCKNGGTCTDGLGTYRCSCPVGFNGQNCQNYVDLCSQIKCKN
DGSCSQIATSWTCHCQIGWAGLYCDVPNMSCEDFAARSGLEVKNVCKNAGRCVSVGNSHK
CECQPGYTGSYCEEMVDECQSNPCRNGATCKDYQGTYECICKPGFQGVNCEYDVDECHSR
PCLNRGTCINLINHFTCICPPGTHGVQCEMNDDDCAPSAGSSEPRCRNGGQCIDGVGGYT
CSCPAGFVGEHCEGDLNECLSGPCSSLGSLDCIELDNNYRCHCRLGFTGRHCESMVDLCV
SKPCRNGGVCSMNSSSMHGYTCFCPPGFTGFSCSEVEGYNCAELRCQNGGHCVKPNTGPL
YCQCKPGFSGPRCETHQRCSVPCQNGGICFKNPSNPFQHSCRCPENFYGPYCEIKIPAAK
PPTTAKPTPTAIPTPTCPYVQCANLSGDKVCDALCNNHECQWDEGDCSLNWRQPWMNCTT
TAVSCWDLFENGQCDKECDNPGCLFDGFECRDRQISPCKYDKYCKDHFHNGICDRSCYTE
ACGWDGLDCSPNDPSSLAGGTLIIVVRLQPEELLGDLNGFLRFLGALLHTNVQVMLNSNK
EPMVFPYYGVEDEQRYQGQRSRSKREADREVIGSEVHLEIDNRECLKASSHCFPNTSVAA
SFIAAEHIKAELPYPLISVATAGVKEEPCVICPYLIGVAVVIVLLILVVGMLAAKKKHKH
AFLWLPDGFLPQKNDKRREPVGQDDFDMKNFKSQDGSLVDGGQSQGWHEDETPFKKPRTE
DKPLLSIPLDGGVDLREWTLQHRKAADITLTPPQADLDADCLDVNVKGPDGFTPLMLASL
RNGGGPDCSLPEEEEESGDEPGPSVISDLITQGANLMAQTDRTGETALHLAARYARADAA
KRLLDAGADPNAHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAAR
LAVEGMVEELIHCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQNNKEETP
LFLAAREGSFEGAQVLLDHYSNRDITDHLDRLPRDIAQERMHHDIVRLLDQYNLVHSPHN
GPNHMGGGGNSSVMCGANGAGFIGMRPGPQGKKSRRSGGGAKVGGVGGGAKEPKDMKAKR
RKKPPGGEGSALGAAVGGGTGGGIGGGGANGVKAAGGLPETSVTMSPVDSLESPHSYTGD
VSGAVSTTANSPPLLSSPTSRMLPPVSHMLGQQQGWVGVPKRSYNGHMYSIPTQMRGLHP
GMTQHLSQSSMLTSMNVTMSREQLPPIVTFQMMTPGAGRAMLKPTQAGQVQVTQAQGQSQ
ALGHSQQGPGNLHCNQNMVYQMPDQLSMAHGPSHTLQGPHTVSHVSHGGMEGQSRPLQPY
PPMQSPVDKYPTPPSQHSYTTGSEGTPAHSAQPQSEHPYLTPSPESPDPWSSSSPHSTSD
WSDVTTSPTPLGNTHHALPSSQRTHIPEQAQMQPQSQQMQQPTQQPQLGNTQVFA
NT seq
7548 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatacccggtttatccctgggcaggtctctagtcctggtcttctgcttcatc
cagctgtctcacgctctccagtgtgtgaatgataaggcaccttgtgtgaacaacgctaca
tgtttaacctttaccaacggaacagaatactgcagatgcgctgcaggctttctaggagaa
tactgccaacataaggacccatgtcagcctggctactgcctaaatggggggaactgctct
gtgtccatgtcagctggtgtccctgtacctggtagtgccacctgcacctgtcctctcggc
tacactggacaacattgccaaactcctcagaactccacgtgctacccaaacaacccctgt
gccaacagaggtgtctgcaccttgctgtcccttgataagtacaggtgtgagtgcaccaaa
ggatggacaggtcaacgctgtgagcacgaggacagttgtctctccagtccttgtgccaac
ggaggaaggtgtagttcacagcctggtggcagctacacctgttcctgtcctcctggctac
aaaggtccccgctgccttaatgacacagatgaatgtgcagacacaccctctccatgccag
aatgaaggtgtatgtgtcaacaccccaggcttctacaggtgtatctgtaaacccgggttt
actggcttacagtgtgaaagctcatacatcccttgctcaccttctccatgtctaaacgga
ggcacctgccaccagacctctgaaaccacctactcgtgccactgccttcaaggttttaat
ggaacaaactgcgagaacaacattgatgactgtcctaatcatcattgtgccaatggggga
acctgtattgatggggtcaatacctacaactgtcagtgtcctccagagtggaccggtcag
cactgcacagaggatgtggacgagtgccggctgcagccaaatacttgccagaatggcggc
acatgtagcaacctggttggcagctatgtctgtgtgtgtgttaatggttggagtggacct
gactgctctcaaaacatcgatgactgtgccactgccgcgtgcagcgcaggctctacttgc
atcgatcgcgtggcatcatttatttgccactgtccccccggaaaaacaggtttgctgtgt
cacagggatgacgcctgtatcagtaacccctgtagagagggctcacattgtgacaccaac
cccgtcactgggatgttcaactgtaactgtccacctggatacataggcagcacttgcaac
attgacagaaatgagtgcaacatggggtctaacccctgcgagcacagcggtacctgtgtg
aacaccgacgggtctttcacatgtaactgtgtcaggggttacactgggcctcgatgtgaa
caagatgtctttgaatgtggttcaaacccctgtcagaacgatggcacatgtctggatcgc
attggagagtacacctgtatttgcatgcctggatttgaaggaactcactgtgagatagaa
gtgaacgagtgtatgagctccccctgtctgaatcagggtaattgtgttgatcaagtcagc
cggtttgtttgcgagtgcccagcaggtttcagcggtgaaatgtgccaaatagacatagat
gaatgttccagcacaccctgcttaaatggagccaagtgtatcgaccgacccaacggatat
gactgcgaatgcgctgaaggttttactggtctgctttgtgaggagaacatcaatgactgc
aatcccccgccatgccatcatggcgtgtgtaaggatggcattgccaccttctcctgtgag
tgcagccctggatacactggctccatctgtaatcttccggttcaagagtgcctcagcaat
ccctgtcagaacagaggtcgctgtgttgatcgggttaatgcttaccagtgcaactgtcaa
ccaggaacatcgggtgtgaactgtgaggttaatgagaatgactgtgccagcaacccctgt
gagtacggagaatgccaagatggcatcaatgaatacaaatgtgtgtgtacccctggatat
acaggagacagatgtgatgttgagatcaacgagtgttcctccaacccgtgcatgagtgga
gggacctgcgtcgacaaggtgaatgggttccattgtctgtgcccacccagcacccacggc
ccattttgcctatctgggatcgatcactgtgtttctcagccttgtgtgcgtggaaaatgt
attgaacaacaacatgggtaccaatgcgtgtgtgatgctggttgggtgggacctcactgt
gaccaagaaaaagacgagtgccagccaaatccgtgcctaaatggtggcggctgtctggac
cgatacaacggctacacctgtcagtgcaaaccagggttcagaggtgtcaactgtgaaaag
aacattgatgaatgtgcatctggaccctgtcagaaccacggtgtttgtaaagacgggatc
aatagctacacatgccagtgtagttcaccatttacaggtaaacactgcgaggtagaacaa
gatccctgtgcttctcatccatgcgagagaggaggagtttgtcttccatctccagattac
acctcttacacctgcaaatgcccacctggatggcagggtgcacgctgcaacgaggatgta
aatgaatgcgtgaggactccttgcaaaaatggcggtcactgcaagaacactcaaggaagc
tacatatgtaaatgtcagcttggatacagtggacacaactgtcagacggacatagacgac
tgctcaccaaatccatgcctgaatggaggcttatgtgtggacaacgtagccaatttctcc
tgcgactgtcgggcgggttttgaaggagagcgctgtgggatcgaggtggatgagtgcgcc
agccagccctgcaggaatgggggcacctgccatgactacgtcaacagctttgtttgtagg
tgccgaccaggattcaatgggatccagtgtgagaacaacatccgggaatgtactgagagg
tcatgtctcaataacgggacttgcattgatggcattaacaccttcttctgtcgttgccgt
gatggtttttatggtcatttttgtgagtacgagcataacgaatgtgactctcagccctgt
aagaatggaggcacctgcacagacggcctgggtacttaccgctgctcctgtcctgttggg
ttcaatgggcagaactgtcagaactacgtggacctgtgcagccaaataaagtgtaaaaat
gatggttcctgctctcagatagctacatcctggacctgccattgccagataggatgggca
ggcctttactgtgatgtccctaacatgtcctgtgaggactttgctgccagaagcggcttg
gaagtgaaaaatgtgtgtaagaatgcagggcgatgcgtgagcgtagggaattcacataag
tgtgagtgccagccaggttacactggcagctactgtgaagagatggtggacgagtgccag
tccaacccatgtcgtaatggagcaacctgcaaggattatcagggcacatatgagtgtata
tgtaaacctggtttccaaggggtgaactgtgagtacgatgtggatgaatgccactctagg
ccgtgcctcaacagaggaacatgcatcaacctcatcaaccacttcacctgcatctgccca
cctggaacacatggagtccagtgtgagatgaatgatgatgactgtgcccccagcgccggt
tcttctgagccacgttgtcgtaacggagggcagtgtatcgatggcgtgggcggttacacg
tgctcctgtcctgcaggattcgttggagaacactgtgagggagatctgaacgaatgtctg
tctggtccctgcagttctctcggcagcctcgactgcattgagctggacaataattatcgg
tgccactgtcgcctcggattcacaggtcgtcactgtgaatccatggtggacctgtgtgtg
tcgaagccgtgtcgtaatggaggagtctgctctatgaactccagctcaatgcatggctac
acctgtttctgtcctcctggctttactggattcagctgtagtgaggtagaaggctacaac
tgtgctgaactacgatgccagaatggtgggcactgtgtgaagccaaacaccggtcccctg
tactgccagtgcaagccaggcttcagcgggccacgctgtgagactcatcagaggtgctct
gtgccatgccaaaatggaggaatctgtttcaaaaacccatccaacccattccagcacagc
tgccgctgtcccgaaaacttctatggcccatactgtgaaattaaaattcccgcggcaaaa
ccccctactacggcaaaacccactcctacggcaatacccactcctacctgcccctatgtg
cagtgtgcgaacctatcaggggataaagtgtgtgatgcactgtgcaacaatcatgaatgc
cagtgggatgaaggagactgctctctcaactggcgacagccttggatgaactgcaccacc
actgcagtgtcctgctgggatctctttgagaatggacaatgtgataaggagtgtgacaac
cccggctgcctctttgacggctttgaatgccgggataggcagatcagcccctgcaagtat
gacaagtactgcaaggaccactttcataacggcatctgtgaccggagctgctacacagag
gcttgtgggtgggatggcctggactgttcccctaatgacccgagcagcttggcaggtggc
acgctgatcatcgtggttcgactgcagcctgaggagctgcttggagacctaaatggtttc
ttgcgcttcctgggagctctgctgcataccaatgttcaggtgatgctgaacagcaacaag
gaaccgatggtgttcccttactatggagtggaggacgagcagagatatcaaggacagagg
agcagaagcaagcgggaagcggacagagaggttattggctctgaggtgcatctggaaatc
gataatcgagaatgtttgaaggcctcatctcattgtttccccaacacttctgttgctgca
tccttcatagcagcagaacacattaaagctgagctgccgtaccctcttatatctgtcgca
acagctggagtgaaagaagagccttgtgtgatctgcccatacttgattggagttgctgtg
gttatcgttctgcttattctggtggtggggatgctggcagccaagaagaagcacaaacac
gctttcttatggctgcctgatggcttcttgccccaaaaaaatgacaagaggagagagcct
gttggacaagatgactttgacatgaagaatttcaagagccaggatggaagtttagttgat
ggaggtcagagccagggatggcatgaagatgaaaccccattcaaaaaaccaagaaccgaa
gacaaacctcttctgtccatcccactggatggaggtgttgatctaagagagtggaccctg
cagcatcgcaaagctgcagacatcactctcactcctccacaggctgacctggatgccgac
tgtctggacgttaatgtcaagggacctgatggctttaccccgttgatgctggcgtctctg
cgtaacggtggaggcccagactgcagcctgcctgaagaggaggaggagagcggagatgaa
cccgggccgagtgtgatttcagatctgatcactcagggtgctaatctgatggctcagacc
gatcgtacgggagaaacggctctccacctggcggcccgctatgctcgcgctgatgctgct
aagagacttctggatgctggagctgaccccaatgctcacgacaacatgggcaggactccg
ttgcacgcagcggtcgcagctgatgcacagggagtctttcagattctgatccgaaatcgt
gcaacagagctggatgccaggatgaatgacggcacaacgccactaatcctggcagcccgg
ctggctgtggaggggatggtagaagagcttatccactgccatgccgacatcaatgctgtt
gatgatcacggtaaatccgctctgcactgggccgctgcagtcaataacgtagaggctacg
ctggttcttctgaagaacggtgccaatcgagacatgcagaacaataaggaggagacgcca
ttgtttcttgcagcgcgggaaggcagcttcgaaggggctcaggttcttcttgaccactac
tcaaacagagatatcactgatcacctggatcgacttcctcgtgacattgctcaagaacgc
atgcatcatgacatagtccgtcttctggaccagtacaatctggttcacagtccacacaat
gggccgaaccacatgggtggaggaggaaactcttctgttatgtgtggagcaaacggagcg
ggcttcatcggtatgcgtcccggacctcaaggcaagaagagcagaaggagcgggggaggg
gcaaaggttggaggtgttggaggaggagctaaggagcctaaagacatgaaggcaaagaga
agaaagaagcctcctggtggagaagggtcagctttgggggctgcagttggtggaggaact
ggaggaggtataggaggagggggagccaatggtgtaaaagcagcaggagggcttccagag
acctctgtcaccatgtcacctgttgactccctggaatcacctcactcatacacaggtgat
gtttctggtgctgtctctaccacagcaaactcccctcctctcctgagcagccccactagc
aggatgctgccccctgtcagccacatgctagggcagcagcagggctgggtgggtgtaccc
aaacgtagctacaatggccacatgtacagcatccccacccagatgagggggctgcaccct
ggcatgacccagcacctcagccagagctcgatgctgacttcaatgaatgtcaccatgagc
agggagcagctgccacccatcgtcactttccagatgatgacccctggagcgggccgggcc
atgctgaagccgactcaggcgggtcaggtacaagtcacacaagcccaggggcagagccag
gctctgggtcactcccagcagggaccggggaacctgcactgcaaccagaatatggtttac
cagatgccagatcagttgagcatggcacatgggccctcccacactctgcagggcccccat
acggtcagccacgtcagtcatggagggatggagggccagtctcggccgctgcagccttat
ccaccaatgcagagtcctgtggacaaataccccacacccccttcccagcacagttacacc
actggctcagaaggtactccagcccactctgcccagccacaaagtgagcatccctatctc
acaccttcacccgaatccccagatccttggtcgtcttcttcgccacactccacctcggac
tggtcggatgtcaccaccagccccaccccactggggaacacccaccatgcactgccatca
tcacaacgcacacacattcctgagcaggcacagatgcagccgcagtcccagcagatgcag
cagccaactcagcagcctcagctgggaaacacgcaggtgtttgcatga
DBGET
integrated database retrieval system
