Nothobranchius furzeri (turquoise killifish): 107393665
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Entry
107393665 CDS
T05163
Name
(RefSeq) protocadherin-18-like
KO
K16499
protocadherin delta 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107393665
Cell adhesion molecules [BR:
nfu04515
]
Cadherins
Protocadherins
107393665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
TMEM154
MPS-4
ECSCR
SIT
Motif
Other DBs
NCBI-GeneID:
107393665
NCBI-ProteinID:
XP_015827689
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Position
sgr02:complement(26500054..26509332)
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AA seq
1184 aa
AA seq
DB search
MTGLFLTVATVVALAAHHAAGKTLKYQIYEEQKVGTVIARLKEDVADVLAKLPSSVSLRF
RVMQRGNSNFLSVREQDGEISIRTKIDREKLCDKSLNCLIQFDVLTLPTEHLQLFHVEVE
VLDINDNAPQFARAVIPIEISESAAVGARIPLDSATDPDVGENSLYTYALEPNNFFKIDI
QSRSDGVKYAELVVLRELDREERSTYELQYTASDRGVPPRTGSTLLKINVADSNDNSPVF
EKSSYVINLPENSPVGTLLIDLNATDADDGTNAKILYSFSNHVSPKIMETFKINPDSGHL
TLIRRLDYEVLNSYDIDVQAQDMGPNSMPAHCKILVKVVDVNDNKPDISIDLMSTQGNGD
AAYISESSLLETFVAFVRVEDLDSGLNGEVECKLHSQGFFKLQKKYENNYMILTNVSLDR
EKRSEFSLTVVAEDHGTPSLSTVKHFTVHVTDENDNPPRFEKGRYEIFKSENNAPGAYLT
SIMATDPDLDANGQVSYSILENSIHGSPISTFVTIDPSNGAIYALRTFDREDLSQISFVV
QAKDAGKPALTSNATVTLNILDENDNPPVIIMPQLWNFTANVPASKFTEAGQLVTVVKAT
DRDTGVNAELICSIVNGNEEGFFLIDPRTCEIHANASLENFPHEHVELTVVVRDQGSESL
SAKAVLKITLYENIEGHVELIDPGASSFDSSMIIIISLVVICAVLLVIMVVFAAHCNREK
KDTRHSYNCRVAESTHQHHPKKPTRQIHKGDITLVPTVNGTLPIRAHHRSPSATPPMERA
QIGSRQNQNSRQSLNSLVTISSNHIPESFALELAHATPPVEVSTRRHTHIAGLQPLSPIK
THTHTHTHRYALQDMDKFSLKDSGRGDSEAGDSDCEMGRESPVDRLLLGEGFSDLMHLEM
HHRLHPAMRLCTDECRILGHSDRCWMPPLASPTSSADYRNNMYIPGEESSQQPQLEDDQS
SVDSENRKSFSTFGKESGGDELGAGGGGEVCAAGGGTGSLLTEMNSVFQRLLPPNMDSYT
ECTETSPPSSLSTTERGSCRSGNAAGNHSNSAVPQDNRRGLLPGGKGPAYPPGVAAWAAS
THYLNPGSGSVGSNHVSSTSSSSSSSSSSSSNSTPASTNGQPPHLKWLPAMEEIPENYEE
DDFDGVFHQGHPSGKRSESRHESGMDASELAHEINKLLQDVRQN
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgacggggctttttctgacagttgcgactgttgtggcgctggcggcgcatcacgcggcc
ggtaagactctgaaataccagatctacgaggagcagaaggtcggcaccgttattgcacgt
ttgaaagaagacgtcgcggatgtgttagccaaacttcccagctcggtctccctccgtttc
agagttatgcagcgggggaactcgaatttcctgagcgtgcgtgagcaggacggagaaatc
agcatcaggaccaagatcgaccgcgagaaactctgcgacaagagtctgaactgtctaatc
cagtttgacgttctgacgctccccacggagcaccttcagctgtttcacgtggaggtggag
gtgctggacatcaacgacaacgcgccccagtttgcccgcgccgtcatccccatcgagatc
tccgagagcgcggccgtgggagcgcgcattccactggacagcgccacggaccccgacgtg
ggtgagaactcgctgtacacatacgcgctggagcccaacaacttcttcaagatcgacatt
cagtccaggagtgacggggttaagtacgcggagctagtggtgctcagggagctggatcgg
gaggagcgctccacttacgagctccagtacaccgcctctgacaggggcgttcccccgagg
acaggctcgaccctcctcaagatcaatgtggctgactcaaacgataacagcccggtgttc
gagaagtcctcatatgtcatcaacctgcccgaaaactcacctgttggcacgctgctcatt
gatttgaacgccacagacgcggatgacggcacaaacgccaaaatcctctactccttcagc
aatcacgtgtcgcccaaaatcatggagacattcaaaatcaaccctgacagcggtcacctg
accctcatcaggcgtctggactacgaggtgctgaactcttacgacattgacgtgcaagcg
caggatatgggccccaactccatgcccgctcactgcaagatcctggtcaaagttgtggac
gtgaacgacaacaaaccagacatcagcatcgatctcatgtccactcaggggaacggagac
gcggcgtacatatctgagtcgtcgctgctggaaaccttcgtagccttcgtgagggtcgag
gacctggactctgggctgaatggagaggtagagtgtaagctccacagtcaagggtttttc
aagctgcagaagaaatacgagaacaactacatgattttaaccaacgtgtctttggacaga
gagaaaaggtcagagttcagcttgactgtggtggctgaggaccacgggacacccagcctc
tccaccgtcaaacactttactgtgcatgtaactgacgaaaatgacaacccgccccgcttt
gagaagggacgatacgagatcttcaaatcagagaacaacgccccgggagcatacctgaca
tccatcatggccactgatcctgatctggatgccaacgggcaggtgagctactccatcttg
gagaactctattcacgggagtcccatctccacctttgtgaccattgacccctctaatggt
gccatctatgcactgcgtacatttgaccgtgaggatttgagtcagatctcttttgtcgtg
caagccaaagacgcaggaaaacctgcactgaccagcaatgccaccgtgactctgaacatc
ctggatgaaaacgacaaccctccggtcatcataatgccccagttgtggaattttacagca
aatgttcctgcatcaaagtttacagaggctgggcagttggtgacagttgtcaaggcgacc
gatcgcgacacaggggtcaacgctgagctcatttgctccattgtcaatggcaacgaggag
ggattcttcctcattgacccaagaacatgtgagatccacgccaacgctagtctggagaac
ttccctcatgagcatgtcgagcttacagtggtggtcagagatcagggaagtgaaagcctc
agtgccaaggctgttctgaagattaccctctatgagaacatcgagggccacgtggagctg
atcgatccgggggcatcctccttcgattcgtccatgatcatcatcatctctttggtggtc
atttgtgctgtgctcctggtcatcatggtggtgtttgctgcccactgcaaccgggagaag
aaggacaccaggcactcctacaactgtcgggttgcagaatccacccaccagcaccacccc
aagaagcccacgcggcaaatccacaaaggcgacatcaccctggttcccacggtgaatggc
accctcccaatcagagcgcaccaccgctcaccctcggccacgcctcccatggagcgagcc
cagattggaagccggcagaaccaaaacagccggcagtccctaaacagcctggtgaccatc
tcatccaatcacatcccagagagctttgccctggaactggcgcacgctaccccacctgta
gaggtgagcacacggagacacacacacatagctggtcttcagcctctgtctcccataaaa
acacacacacacacacacactcacaggtatgcattgcaggacatggacaagttcagcctg
aaggacagtggccgtggggacagtgaggcgggggacagcgactgcgagatggggcgggaa
tcccctgtggacaggctgctgctaggggagggcttttctgacttaatgcacctcgaaatg
caccatcgactgcacccagctatgagactgtgcacggatgaatgtcgcatcttgggacac
tctgaccggtgctggatgccccctctcgcctcccccacttcctctgccgactatcgcaac
aacatgtacatccccggggaggagtcctcgcagcaaccccagctcgaagacgaccagtcg
tcagtggactcggagaaccgtaaaagcttctccacttttggcaaggagtctggtggtgac
gagctgggggctggagggggtggggaggtttgtgcagctgggggagggactggctccctc
ctcacagaaatgaactctgtgttccagcgactcctaccccctaacatggactcctacact
gagtgcactgaaacgagcccaccctcgtccttatcgaccactgaaagaggaagctgtcgt
agtggcaatgctgccggtaaccatagtaacagtgctgttcctcaggacaaccgcagaggg
ttgttgccaggtggcaaaggtcctgcttaccccccaggtgtggcagcatgggctgccagt
acccattacctaaatccaggaagtggatctgtagggagcaaccatgtttcctccacatca
tcatcatcatcatcatcatcctcatcatcatcaaactccactcctgcctccactaatgga
cagccaccacacctgaaatggctgccagccatggaggaaatcccagaaaactacgaagag
gacgacttcgatggcgttttccatcagggtcacccgagcgggaaacgcagcgagagccgc
cacgagtccggcatggatgctagcgaactggcgcacgagatcaacaagctgctgcaggac
gtcagacagaactag
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integrated database retrieval system
