Nothobranchius furzeri (turquoise killifish): 107394630
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Entry
107394630 CDS
T05163
Name
(RefSeq) versican core protein-like
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
EGF_2
ig
I-set
Motif
Other DBs
NCBI-GeneID:
107394630
NCBI-ProteinID:
XP_015829120
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All DBs
Position
sgr19:11843954..11869154
Genome browser
AA seq
1831 aa
AA seq
DB search
MLLTRTRRVQILPLLCAVCHLTLAFPAQTPSAYEEVRHLQVNIHHSGPVLTPLGGSITIP
CFVSLSSTPTSSSSSPVAPRVKWTVVSGGIETQILVARGQRVKINEAYRDRAALLNYTSS
PEDVSLWFGDLRHSDSGHYRCEVQQGLEDASDIIQVKVKGVVFHYRDALGRYAFSFPQAQ
RACRSIGAQIATPDQLLAAYYDGYEQCDAGWLADQSVRYPIQVPREGCYGDMDGQPGVRN
YGTMNPNNLFDVYCYVDGINGEVFHDSIPQQLSFDEAQSYCGTADAKLATTAQLYFAWSE
GLDRCNPGWLADGSVRYPIVTPRERCGGPQSGVKTLYLFSNQTGFPEASSLHDVYCFKEN
RKTYSDSPVEFITTEAEDIEQNVIILLENAQELQLNKQTEQVEREAQSVLESLPFWSGSF
TPETPVSTHPTLLSDTTESFPSTASALDVLQRSNETSEISYDSQHPKERMNTTTSKTETY
NSTQNTFPPSVYNETDFNQNVSITFHHSTMYESHIENQTVPSTSLQTTHPLEELKQPQDI
HESGLGIDKPHINYSETERNLTPEESFRGVTTLTDDSLLQVKVEEVAVKDHELTLLSTEA
SQEKTMLLTQTTASAVETLTSVWSHVHGSGDSSQERDPEVEEVITSQSSTTGQTTHLSHS
AMVIVPTEPQTVAPRLTVSPVSRNVEKQDHEIFSTSPYLWESPSSRQEGSASLETVDMLT
MDSEEIQIHTTQPGVVSEESLATTQSLEGLNTSQPPFEFSTAESQTSGYRTYFESSHSYD
EASGYEPGTVSSTFKEDKKVVPTFKEQTIVATVHEQEINISLLLEQDKVNSTHGLEEEEA
KIITTIFLTEEDSVEEFTVAPALVFKEVPKVVPTLILKEKAELTPIPVLEQETKASPTLE
GEAKIASSLHLENQPSVAPTSEKETKVAPTVVLKKDIEFTITPILETEAKAVPTMISKEA
AKAFPSLITEKEAKAAPTLIIDGEAKATSTLITEEEVKASQSLISEDKLTPILITEEGAK
ATPTLIIDREAKASTTMIIDGEAKATSTLITEEVKASQSLITEDKATPILITEEGAKATP
TLIIDREAKASTTMIIEEGTKAAPTLIIGEEAKAIPTMTTLIIEEDKATPILITEEWAKA
VPTLIIDGEAKATPTLIIEGMNAKASTTKIIEEGAKAAPTLIIGEGAKATPTLIIEGEAK
ATPTLAIDGGAKTSLTLITEEEVKASKPLITEEAKAAPTLIIDEEVKPSSTLITEEEAKA
APTLIWEGAMVSSAFDPEGEASVPPTSEDEINAAPTLVTEEEIKLVTTWALDERTKVPSI
FDYEGEVRVVPMLEAEVKVVPTFAIIKDSKDFPTSAFEEANVVSNSKEVAQTFVLEEEPK
IDPTLVYEGEAYVAPTNEGRKVSPTLAIEEATKDTLTLENEKVKIAPTFDDFSISPFISE
TSKWTLLPTTTGQQESLNEVKFNRGPTIAVSDSLATQMSTKPTALASTTTTPTITTTTHR
SRHVWSPTTSSPKSFHEKVELQKVTHTIPLVDHGLGDGELSLTLPPTLLNLPNERAAVGG
TGKSSDACLNDPCLNGGTCTDQDGHIKCLCLPTYEGDFCQTDLEQCEPGWDKFHGFCYRH
FSQRQSWEVAEQHCRMQGAHLVSIMTPEEQDYINGNYKEYQWTGLNDKTIEDDFRWSDGN
PLLYVNWYRGQPDSYFLSGEDCVVMVWHDNGRWSDVPCNYHLAYTCKKGTSSCGPPPKIR
NASIFGKTRQRYETGAIVRYHCREGFQQRLFPLIKCLSGGYWQRPQILCIPKSGGPTRHP
EEFSLTESNFAAAENEDGATKEAPQYWDIKF
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgacaagaaccagacgtgtgcagatactccctctcctctgtgcagtttgtcac
ctgactctggcctttccggcacaaactccttctgcatatgaggaagttcggcatcttcaa
gtgaacatccaccactcgggtccagttctcacccctctgggtggctccattactatcccc
tgttttgtgtccctgtcctccactcccacctcctcctcttcctcccctgtggcaccacga
gtgaagtggacagtggtgtccggtgggattgagacgcagatattggtagcccgaggtcag
agggtgaagatcaacgaagcgtaccgagatcgggccgcgctgctgaactacacctcctct
cccgaggacgtatccctgtggtttggagatttgcgccacagtgactcgggtcactatcgc
tgtgaggtgcagcagggactggaagatgccagtgacatcatacaagtcaaagtcaaaggg
gttgtgttccactatagagatgctttgggtcggtatgccttttccttcccgcaagcccag
agggcttgcaggtccattggtgcacagattgcaactcctgaccagctgctggctgcctat
tatgatggatacgagcagtgtgacgcaggctggctggcagatcagtccgtcagatatcca
atccaggtccctcgtgaaggttgctatggagacatggatgggcaaccaggagtgaggaat
tatgggacaatgaatccaaataatctatttgatgtttattgctatgtagatggaattaat
ggggaggtgttccacgactccataccacaacagttatcatttgatgaagctcagtcctat
tgtggaactgcagatgctaagctagcaacaacagcacaattgtactttgcatggagtgaa
ggcttggaccgctgcaatcctgggtggcttgctgacggtagtgtacgctatcccatcgtg
accccaagagagagatgtggcggccctcagtcaggtgtcaagaccctctacctcttcagc
aaccagactgggttcccagaagcttctagcctccatgatgtgtattgtttcaaagaaaac
agaaaaacttacagcgactctccagtggagtttatcaccacagaggctgaagacattgag
caaaatgttattattttattggaaaatgctcaagaacttcagctgaacaaacaaacagaa
caggtggaacgagaggcccaaagtgttcttgagtctttgcccttttggtctggctctttt
actccagaaaccccagtcagcacacacccaacgcttttatcagacacaactgaatccttc
ccaagcacagcgtctgcactggacgtccttcagcgatctaacgaaacttcagaaattagt
tacgactctcagcatcccaaagaaaggatgaacaccaccaccagcaaaacagaaacctac
aattcaacacagaacacatttccacccagtgtttacaatgagactgatttcaaccagaac
gtcagcattacatttcaccattcaaccatgtatgaatcccacattgagaaccaaactgtg
ccaagcaccagtttacagactacacatccacttgaggagctaaagcagcctcaagatata
catgaaagtggcctaggtatagacaaaccacacatcaattacagtgagacagagagaaat
cttactccagaggagagtttccggggggtgaccactttgacagatgactcattgcttcag
gtgaaagtggaagaggtagccgtcaaagatcatgagctcacgttgctctcaaccgaggca
tctcaagaaaaaacaatgctccttactcaaactactgcatcagctgttgagacgttaacc
tcagtatggagtcacgtgcatgggtctggagatagctctcaagagagagaccctgaagta
gaggaagtcatcacatcccagtcttccactactggccagaccactcacctatcacattct
gccatggttatagttcccaccgaacctcaaactgtagccccacgtctaaccgtctcacct
gtatcgagaaatgtggaaaaacaagaccatgaaatcttttccacatcgccatacctgtgg
gagtcccccagttctagacaagaggggagtgcaagcttagaaactgtagacatgttgaca
atggacagtgaagaaatacaaatccacacaactcagccaggtgtagtttctgaagaaagt
ttagccaccacccagtctctggaagggctgaacacctctcaaccaccctttgagttttct
acagcagaaagtcaaacgtcaggttacagaacgtattttgaatctagccattcttatgat
gaagcaagtggatatgaacctggaactgttagttctacatttaaagaggacaaaaaggtt
gttccaaccttcaaagaacaaactattgtagccacagtccatgaacaggagatcaatatt
tcccttttattggaacaagataaagttaactcaacacatggattagaagaagaagaagcc
aagattatcacaaccatttttctcacagaagaagacagtgttgaagaattcacagttgcc
ccagctcttgtctttaaagaagtacctaaagtggtcccaacccttattcttaaagaaaag
gctgaacttaccccaattcctgttcttgaacaggaaactaaagcatccccaactcttgaa
ggagaagctaaaattgcatcaagtcttcaccttgaaaatcaacccagtgttgcaccaacc
tctgaaaaagaaaccaaagttgctccaactgtggttctcaaaaaagatattgaatttacc
ataaccccgattcttgaaacagaagctaaagctgtaccaaccatgatctctaaagaagcg
gctaaagctttcccatccctgatcactgaaaaagaggctaaagctgccccaaccctgatc
attgatggagaagccaaagctacctcaaccctcattactgaagaagaagttaaagcatcc
caatccctgatcagtgaggacaaacttactccaattctgattaccgaagaaggggctaaa
gctaccccaaccctgatcattgatagagaagctaaagctagcacaaccatgatcattgat
ggagaagccaaagctacctcaaccctcattactgaagaagttaaagcatcccaatccctg
atcactgaggataaagctactccaattctgattactgaagaaggggctaaagctacccca
accctgatcattgatagagaagctaaagctagcacaaccatgatcattgaagaaggaact
aaagctgcccctaccttgatcattggggaagaagctaaagctatcccaacaatgaccacc
ctgatcattgaggaggacaaagctactccaatcctgattactgaagaatgggctaaagct
gtcccaaccctgatcattgatggagaagctaaagccaccccaaccctgatcattgaggga
atgaatgctaaagctagcacaaccaagattattgaagaaggggctaaagctgcccctacc
ctgatcattggggaaggcgctaaagccactccaaccctgatcattgagggagaagctaaa
gctacccctaccctggccattgatggaggagctaaaactagcctaaccctgatcactgaa
gaagaggttaaagcatccaagcccctgatcacagaagaggctaaagctgccccaactctg
atcattgatgaagaagtaaaacctagctcaaccctgattactgaagaagaggctaaagct
gccccaaccttgatttgggaaggagccatggtatcctcagcgtttgaccctgagggagaa
gctagtgttcccccaacgtctgaagatgaaatcaatgctgctccaactcttgtcactgaa
gaagaaataaaacttgtcacaacatgggcccttgatgaaagaaccaaagttccttcaatt
tttgactatgagggagaagtcagagtagtgcccatgcttgaagccgaggtcaaagttgtt
ccaacttttgccattattaaagattctaaagatttcccaacctcagcctttgaagaagcc
aatgttgtctctaattctaaagaagttgcccaaaccttcgtccttgaggaagaacctaaa
attgacccaaccttagtctatgaaggagaagcttatgttgccccaacaaatgaaggacgt
aaagtttctccaacacttgccattgaagaagcaacaaaagacacccttacccttgagaat
gaaaaagtaaaaattgctccaacctttgacgattttagcatctccccgtttatttccgaa
acatctaagtggactctgctgcccactacaactggacaacaagagtctttgaatgaagtt
aagttcaatcgaggacccaccattgctgtttctgattcactggcaactcagatgagcaca
aaacccactgctttagcctcaacgacaaccacccccaccataaccaccaccacacatcgc
tccagacatgtctggagcccaactacctcctcacccaaaagtttccatgagaaggtggag
ctacagaaggttacccataccattccactggtggatcacggtttgggtgatggtgagctt
agcctcacactgccacccaccctgcttaacttgcccaatgagagggcagctgtaggtggg
acagggaagtcttcagatgcctgtttgaatgacccctgtctcaacggaggcacctgcaca
gatcaagatggacacattaaatgtctctgtttgccaacatatgagggagacttttgtcaa
actgatctggagcaatgtgagccaggctgggacaaatttcacggtttctgttatcgacac
ttcagccagcgtcaaagctgggaggttgctgagcagcactgtcggatgcaaggagctcac
ttggtatccatcatgactcctgaggagcaggactacatcaacggcaactacaaggaatac
cagtggactggtttgaatgataaaaccattgaggatgatttccgctggtctgatggcaac
ccactgctgtatgtgaactggtaccgaggacaaccagacagctacttcctgtctggagaa
gactgcgtggtgatggtgtggcatgataatgggcgctggagcgacgtaccctgcaactat
cacctcgcatatacgtgcaagaagggcacctcctcctgtggtccgccaccaaaaatacga
aatgcctcaatttttgggaaaactcggcaaagatacgaaaccggtgcaattgtgcgttac
cattgcagagagggcttccagcaacgattattccctctgataaaatgcctgtctggagga
tattggcagagaccacagatcctgtgcatcccaaaatctggaggaccaacgcgtcaccct
gaggagttttctctgactgagagcaactttgctgctgctgaaaatgaggatggagccact
aaagaggccccacagtactgggacatcaagttttaa
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integrated database retrieval system
