Nothobranchius furzeri (turquoise killifish): 107394805
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Entry
107394805 CDS
T05163
Name
(RefSeq) versican core protein-like
KO
K06794
neurocan core protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfu00535
]
107394805
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107394805
04091 Lectins [BR:
nfu04091
]
107394805
Proteoglycans [BR:
nfu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
107394805
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
107394805
Lectins [BR:
nfu04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
107394805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
I-set
EGF_2
EGF_3
Motif
Other DBs
NCBI-GeneID:
107394805
NCBI-ProteinID:
XP_015829417
UniProt:
A0A1A7ZT38
LinkDB
All DBs
Position
sgr02:33976884..34021055
Genome browser
AA seq
1404 aa
AA seq
DB search
MEMIGPALMHLLVFLGLSSARPQPASPHIPGRIKKVSQVSGFLGETVLLPCDFSTMLISP
RSLEHISTHTPTTVPPSQRENARIQWVKVEESQDELLETGVVVAFEGNMKVASEFQDRVS
VSKDLLAAGDASLMITGLRASDSGLYRCKVMYGMEDAQSTVSLRVSGVVFHYRASSSRYT
LNFTEAKDACSSVDAIMASPNQLTAAYEDGYDQCDAGWLSDRTVRYPIALPRPGCAGDLL
QQPGVRTYGVRNPAEKYDVYCFVDKVHGEIFYPLSISEKLTWQQAKEKCETYGAALASPG
QLFAAWREGLNRCDYGWLSDGSVRYPINVPLPQCGGGTLGVRTLYKYENQTGFPDPTDKH
GAYCFREILPDPTTASAHTGPYPARAELQTRTPDLGRFSQTESPHVDLNSPLVTTLATST
ITFHDYDVKEDTRLVEALPKWDTLSPIWLPALFVPPTQPEYLDISQHGEKESQVATGRIE
SSASGDGGSEDVSSKGTLGDEVTPKTKLTPEITTRMETSSAEAALNPALHPAITTTEQDL
GSVPTEAGQQAALVFKDEDTPEAMIKLDLGNPLVLSLGEDSPAKPPLQLIIVNAPKANES
VDLVLGLLGLPLNVSDSLTSLTGDLTHVDSEADSSSGEVELVQPFPINLPTAISFVNGNH
EVTLEPKHPEEVRGDQFETATHVQVQEEDSQETNLGVIPSEDSVPHIPSEETSEDVLTDS
NGLKTVTTHPPVVSSVKSTTSSDSILVGVPPLFPGEFFSYEDMNSEGSAGHLTDDEAGAS
QEGSADGALQTLTSDSVLSPRTDETEVGGTESSTFIPDSTPHETTTQGQVGDFEGSASGE
DEASGQEIYPPVKTRFTSTPPPIYSTTHTQQPPSAQETRVTEEAVEGQSADRMTETGSGV
EQPSREEEASVLAEPSADDSISDASAAGTTSGTQDTASETSTHRPFTHLSIAASNQRTRM
STTSSDHLTEASSTSSTQRASLTTLSTMSPFYTFDHNNHSVPKWALTPDPAATPLPDENV
MDYDGISRPYLPESPPKTPLEAGVREEPETSTDMTSVNVKDLLPCSISVCQNGGSCYRTG
SQSICICAPGYTGPQCETDVDECHSNPCLNGATCQDGVNSFTCLCLPSYSGKLCEQDTAV
CGFGWHKFQSHCYKYFTHRRTWDAAERECRLHGAHLVSILTHEEQMFVNRLGSDYQWIGL
NDRVFERDFRWTDGSQMQYDHWRPNQPDSFFQSGEDCVVMIWHEGGQWNDVPCNYHLTFT
CKKGTVSCNQPPVVKHADVFGAMKPRYEIGSLVRYHCKWGFIQKHTPTIHCQPNGHWETP
RITCIRPATYHKSVVLRRLSDTMEPQSRQLIQHTESQHKHNPEQKLSNSNLQSVWNPAEN
QLRQIFQKKWKSQVHTQNQDQTGH
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggagatgattggacccgccctcatgcacctgctggtcttcctgggtctgtcttcagct
cgccctcagccagcttccccacacattccaggaaggattaagaaggtctcacaggtatca
ggctttctaggcgagacggtgctattgccatgtgacttctccacaatgctaatatctccc
agaagcctggaacacatttccacacatactccaacaaccgtaccccccagtcagagagaa
aatgccaggatccagtgggtgaaagtggaagagtcacaggatgagttgctggagacgggg
gtggttgtggcgtttgaagggaacatgaaggtggcttcggagttccaggacagggtgtcg
gtatccaaagatctgctggcggcgggtgatgcctctttgatgatcacggggctcagggca
agtgacagcggcctttatcgctgtaaggtgatgtatgggatggaggacgctcagagcacc
gtcagcctcagagtctccggagtggtgttccactacagagccagcagcagccgttacact
ctgaactttactgaggccaaggatgcatgcagctctgtggacgccatcatggcttcaccc
aaccagctgaccgctgcttatgaggatggttatgaccaatgtgatgcaggctggctgtct
gacagaacagtcagatatccgattgctcttcctcgcccgggctgcgcgggtgatctgttg
caacagccaggtgtgagaacgtatggcgtccgtaaccctgcagagaagtatgacgtctac
tgcttcgtagataaagtacacggtgagatcttctaccctctctccatcagtgaaaagctc
acctggcagcaggcaaaagaaaaatgtgagacgtatggtgctgctctggcttctcctggt
cagctgtttgcagcctggagggaggggctgaaccgctgcgactatggctggttgtctgac
ggtagtgtccggtaccctatcaacgtccccctgcctcagtgtggaggtggaacactgggg
gttcgtacgctctacaagtatgaaaaccaaaccggcttccctgaccccacagacaagcat
ggagcttactgcttcagagagatactaccagacccaaccacagctagcgctcacactggt
ccataccctgccagagctgaacttcagaccagaacaccagatctgggccgtttttcacaa
acagagagcccacatgtggacctcaactccccccttgttacaacactggctacgtccacc
atcacctttcatgactacgatgttaaggaagatacgcgtctggtagaggctctgccgaag
tgggacacgctcagtcctatatggctcccagctttatttgtccccccaacacagccagaa
tacctggacatctcccagcacggggagaaggaaagtcaggtagcaacaggccggattgag
agcagtgctagtggggatggaggcagtgaggatgttagctccaaagggactttgggagat
gaagtaaccccaaaaaccaaactgactccagaaatcaccacaaggatggaaacctcatca
gcagaagcagctctgaatcctgcacttcatccagcaatcaccacaacagaacaggacctg
gggtccgtccccacagaggcaggacaacaagcagcactggtttttaaagacgaggacact
cctgaggccatgataaagttagacctagggaaccctctggtcctttctcttggagaagac
tcaccagccaaacctccccttcaactcatcatcgtcaatgctccaaaagcaaatgagtca
gtggaccttgtcctgggactcctgggccttcctctcaacgtctccgactcgttgacctcc
ctaaccggcgacctcacacatgtagacagtgaagctgactcgagcagcggagaggttgaa
ctcgttcaaccgtttcccatcaacctgccaacagcaatcagctttgtcaacggaaaccac
gaggtgacgttggagccaaaacatccagaggaggttcgaggagatcagtttgagacggcc
acacatgtccaagtgcaggaggaggacagtcaggagacaaacctgggtgtgattccctca
gaggacagtgtcccacacattccttcagaggagaccagtgaggatgtgctcacggactca
aatggactcaaaactgtcactacacatccaccagtggtctcatcggtgaaatctaccaca
tcatcagactccatccttgttggtgtccctccgttatttcctggtgagtttttctcctac
gaggacatgaactcagaggggtctgcaggccacctgacagacgacgaggctggtgcttct
caggagggttctgcagatggagctcttcaaaccttaacttctgacagtgtgctgagtcct
aggactgatgagacagaagtgggaggaacagagtcttccactttcatcccagactcaacg
ccacatgaaaccaccacacagggtcaggtgggggactttgaggggtctgcttcaggagaa
gatgaggcctcagggcaggagatttacccaccagtgaagacccgattcaccagcacgcca
ccacccatctactccaccactcacactcagcagcctccatctgctcaggaaaccagagtc
acagaggaagctgtagagggacaatctgctgatagaatgacggagacaggctcaggtgtg
gagcagccgtctagagaagaggaggcttctgttctagctgagccatctgcagacgacagc
atctctgatgcctcagcagctgggaccacatcaggaacacaagacacagcctcagagacc
agtacacacagacccttcacacacctcagcattgctgcatcaaaccagaggaccaggatg
tccaccacctcttcagaccacctcactgaggcgtccagcacaagctccactcagagagca
agtctgaccacgctctccaccatgtcacccttttatacctttgaccacaacaaccactct
gtccctaagtgggctctgacccctgaccctgctgccacacctctgccggatgagaatgtt
atggactatgatggaataagcaggccgtatctaccggagtctcccccgaagacccctcta
gaggccggggtcagggaggagcctgaaaccagcacagacatgacttctgtgaacgtcaaa
gatctcctgccctgctccatcagtgtgtgtcagaacggaggctcctgctacaggacagga
tcccaaagcatctgcatttgtgcacctggatacaccgggcctcagtgtgaaacagatgtc
gacgagtgtcactccaacccatgtctgaacggagccacctgtcaggacggggtcaactcc
ttcacctgcctctgcctgcccagttactcaggaaagctgtgtgaacaagacacagctgtg
tgtggattcggctggcacaagtttcagtctcattgctacaaatacttcacccaccgtcgg
acgtgggacgctgctgagagggagtgtcgtctccacggagcccacctggtcagcatcctg
acccatgaggagcagatgtttgttaaccgtctgggcagcgactaccagtggatcggtctg
aatgacagggtgttcgagagggactttaggtggacggacggcagccagatgcaatatgac
cactggaggccaaatcagccggacagcttcttccagtctggagaggactgtgtggtgatg
atctggcatgaaggaggacagtggaacgatgtcccctgcaactatcacctgaccttcacc
tgcaaaaagggaacagtttcctgtaaccaacccccggtggtgaaacacgctgatgtgttt
ggagccatgaagcctcgctatgagatcggcagcctggtgcgctatcactgtaaatggggc
ttcatacagaagcacacccccaccatacactgccagcccaacggccactgggagacaccc
agaatcacctgcatacgccctgcaacctatcacaagtctgtggttcttcgacgcctgagc
gacacgatggagccacaaagcaggcagctcatccaacacaccgagagtcaacacaaacac
aacccagagcagaaactgagcaacagcaacctgcagagtgtctggaaccctgctgagaat
caattgaggcaaatcttccagaagaagtggaaatcacaggtccacacacaaaaccaggat
cagacgggacactga
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integrated database retrieval system
