Nothobranchius furzeri (turquoise killifish): 107396090
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Entry
107396090 CDS
T05163
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107396090 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107396090 (sh3rf1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107396090 (sh3rf1)
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107396090 (sh3rf1)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107396090 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
107396090
NCBI-ProteinID:
XP_015831115
UniProt:
A0A1A8UTZ7
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGSGAGVCTNGMSGAVARAHGGGTRDQGTPGPQRAQAK
STAVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWFHGEVGGVHGFFPTN
FVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDVLTVIRRVDENWAEGMLGDKI
GIFPISYVEFNSAARQLIELDKPSDSSGDSGEGASLGPQSNGAQRPGEKKNSKKRHSFTS
LTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSSSAPSQVHICTTGLI
VTPPPSSPVTTATVFTFPSEMSYTSIALDALPPPPPPPPQASVSGAAYSVAAGQRPSPSV
SDQTGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPG
NYMSPVSRTASGNTQPKVPMSLCTQAGRGVTIVSPSSAPLGVIVPGPDSNKPLTVCSAAV
PACSQPAAVVATAQTATGQQPKVSLHVNSQMTVNQARSAVRTAACHSQDRPTAAVTPIQS
ATPVTFVPQLSVCPQPSSNSAQGCSRAGAALGCAAASLTPPNVNAASLEVDALRPVPVGS
GSSAAISHSSSSAAFVCRMDKDGKREKKSLLKLLSSNKKKSRPSPPSSPTLEGEQAGAGE
VLHGAVCPDTSPPSSSVSCLELESAAVASALPSASPSVPESTHRKSGPLDGCAPIAPPPR
QPCSSLLPQQYDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKREDGWFKGTLQR
NGRTGLFPGSFVDSI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcagttttgttggatctgcttgagtgtcccgtgtgtctggagcgtttggat
gcctctgcgaaggttctgccctgtcagcataccttctgccgtcgatgtcttcagggcatc
ttaggctctcgtggagagctgcgctgccccgagtgccggactttggtggagtgtgctgtt
gatgaactcccaagcaacatcctcctggtgcgcttgttggatggcatcaagcagagacct
cgaagggccggctcgggggctggagtgtgtacgaacggcatgtctggagctgtggccaga
gcacatggaggtggaaccagggaccagggaactccagggccacagcgtgcccaggctaag
agcacagcagtccggggggtcccacagctcccatgtgccaaggcgttgtacaactatgat
ggtaaagaaccaggagacctcaaattcagcaagggtgacatcatcatcctgcgccggcaa
gtggacgagaactggttccatggggaggtgggtggggtgcacggctttttccccaccaac
ttcgtccaggtcatcaagcctctgcctcagccgccgcctcagtgcaaagctctctacgac
tttgagctcaaagacaaagaggctgacaaggactgcctgcccttctccaaggatgatgtc
ctgactgtgatccggagggttgatgaaaactgggcggagggaatgcttggagataaaatt
ggaatttttcccatctcatatgtggagttcaactctgcagcgcgtcagcttatcgagttg
gacaagccgtctgactcgagcggagactccggtgaaggggcctccttggggcctcagagc
aacggtgcccagcggccaggggaaaagaagaacagcaagaaacgacattccttcacttct
ctcactatgtcccacaaacccatgctagctcctcctcctcagcgccactccatggagatt
agcgggccggtcctcatcagctccagcaaccccacagcagctgctcgcataggcgagatc
agcggggggctttccagcagcgcaccttcacaggtacatatttgcacaactggactaatt
gtgactccacctcccagcagtcctgttactacagcaaccgtcttcacatttccctcagag
atgagctacacatccatcgctttggatgctctcccaccaccccctcctcctcccccgcag
gcctctgtcagcggagcagcgtactcggtggctgctggacagagaccctcccccagtgtc
agcgaccaaactgggagacaaagacctacagtctatgtggcaatgttcccgtacactccc
cgcaaggaggatgagctggagctgcgaaaaggagagatgttcctggtgctggagcgctgt
caggacggctggttcaagggcacctccatgcacacgggcaagattggagtcttccccggg
aactacatgagtccggtcagcaggacagcgtctgggaacacccagcccaaagtccccatg
agtctgtgcactcaggctggcagaggagtgaccatcgtcagcccttcctctgctcccctg
ggagtcattgttcctggtcctgattccaacaaacccctcaccgtgtgctccgccgctgta
cctgcgtgctcccaacctgcagctgtggtagcaacagctcagaccgctacgggccaacag
cctaaagtctctctccatgtcaactcacagatgacagtaaaccaggcccgcagcgccgtc
cggactgccgcttgccacagtcaggacagacccacagcagcagtgacacccatccagtct
gctacacccgtgactttcgtcccacagctctccgtttgtccgcagccctcctctaactcg
gctcaaggctgctcccgggccggagcggctctgggctgcgctgctgcctccctgactcct
cctaatgtgaatgctgcttctctagaggtcgacgccttgagacctgttcctgtgggctct
gggagcagtgctgccatcagtcactcatccagcagtgcagcttttgtctgcagaatggac
aaggatggaaagagagaaaagaagagtcttctgaagctgttgtcctccaataagaagaag
tctcgaccttcacctccctcctctcccacccttgaaggagaacaggctggagctggagag
gtgctgcatggagcggtgtgtcctgacacctcccctccctccagctccgtcagctgcctg
gagctggaatctgctgctgttgcttctgccttgccatccgcctccccctcagtccccgag
tctacccatcggaagagcggcccgcttgatggatgcgctcccatcgctcctcctcctcga
cagccctgctcctctcttttaccgcagcagtatgatgcacgtcccatcatatgtgagagg
tacagggtggtggtgtcgtatcctccgcagagcgaggccgagctggaactcaaggagggg
gacatcgtgtttgttcacaggaagcgggaggacggctggttcaaaggcacgctgcagagg
aacggcaggactggcctgttccctggcagcttcgtagacagcatctaa
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