Nothobranchius furzeri (turquoise killifish): 107396386
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Entry
107396386 CDS
T05163
Name
(RefSeq) versican core protein-like
KO
K06793
versican core protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04514
Cell adhesion molecules
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107396386
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107396386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfu00535
]
107396386
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107396386
04091 Lectins [BR:
nfu04091
]
107396386
Proteoglycans [BR:
nfu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
107396386
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
107396386
Lectins [BR:
nfu04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
107396386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
EGF
hEGF
Sushi
EGF_2
FBO_C
EGF_CA
Motif
Other DBs
NCBI-GeneID:
107396386
NCBI-ProteinID:
XP_015831572
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MSEKPLTIAQLDQEYSGSKTTLVLSSTLSLKGSPSSPYTSEAPTAKSPGITDGHEAHKTL
LPSLQMEPPVSTVFDGTVPTLLTRSTITSASTATMLSSETALPPITTEAKSSGYSPSQST
SGTTVAPTTPSPVFILLSSLTVPTKSQTRHSSTTLVPTATSTYGTDIPTSVSSDMVPKMH
EVGSTSFTFDTTRTTSDSSLKPINTFFKGLPSSSPTYFHSSSVSIPEKPGNVSVSTQPVL
GSSIDTFQSLLASHNNNKSLVDSTTKLPEDSTWNPTPDIISQISTVPVVTEEEDYNYSAS
GGLVESISDIVSSGGDISGDLNETTTEMQTQFNVPFVSQLSQKIHGPYIGLNEMTTISQN
EYIVATDEVETSEADNTSDMKMVISAQSAHLTSTQTYFSASGSGDLIDASSDDEVSGTPY
NQPPPRGPDTRSFPDADKTADSVVPPAFKTGRTTTSTEVPLSDDNFRLSSLPSATSQPSA
LESVTPSTYATKKPTELALSNNIPSVDILSIYNKDMLTPPPAMMVSSTIGAVNLDEEATK
SPFKTSHTTGMDAIKTSQPKQDDNQSVSIPLPTILYQSIIDQQVEIVTSNSKQVETDLKK
GTPTMVLKMSQPSSSTSITIKERDEQWSRAKDDISPDSPTPEINANDDTIIDVDTLSIVT
SSLLYPNVQTEEAAGVIAVTMTQPFDIKEDLEGSGTASTTTFTPTFADSATYSTLTIASP
KYDSTKATSKLNNANEYSTSTISSQHLSIEQTSKVISTSVTSNEMAQSHTTASPTYSAAA
SQKSVEHVKSDTIKPRKPQTDHSFHNVSSTTTITYPNTNGQKPIHPYTYDDDLDDDYPDN
SGKKNNIVESVPQLSTTTMPSADSNVFVTSKPIAQTTEIHPSLDNIEIQPSEKDSDSNGT
SSVSSDSEFGEQITSIPKMDGIKDGNLSPDKIQTVFKVNATSTSKTVTDGPYHASDQEIV
NNINESNSETTTRTHQKFIATSTAQAKNHLSVPSLSTTRSSSHEERKHENSDLKTSPSLN
GITQLIAAEETTTSNPTSLNLGHTVVGEAVEIPGLYSCTMNVCLNGGSCYKTGSAYSCSC
APGYTGHQCETEIDECQSNPCRNGGTCVDGVMSFTCVCLPSYSGLHCEEDTETCDYGWHK
FQGHCYKYFPHRKTWDSAERECRIQGAHLSSVLSHEEQQFVNRLGQDYQWIGLNDKMFDS
DFRWTDGSPVQYENWRPNQPDSFFTSGEDCVVMIWHEDGQWNDVPCNYHLTYTCKKGTVA
CSQPPVVENTRTFGKKRERYEVNSLVRYQCRSGFIQRHIPTIRCRGDGRWDLPKIACISP
STYQRSFTRRHQHKSLYSINNFKSWNDDAFRLHHPRYRGKRDRTEPKKRMP
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaagccccttaccattgcacaattagatcaagagtattcaggaagcaaaacc
acacttgtgttgagctcaactctttctctcaaaggttcaccttcatctccttatacttcg
gaggcaccaacagctaaatcacctggaataacagatggacatgaagcacataagacacta
ctgccgtctcttcaaatggaaccaccagtatccacagtctttgatggcacagtcccaact
ctactgacaagatcaactattacatctgccagtacagcaacaatgttatcttcagaaaca
gcattaccacccataaccacagaagctaaaagttctggatacagccctagtcaatccact
tctgggacaactgtagcacctaccactccttctccagtgtttatcttgttgtcatcactt
actgttccaaccaaatctcaaacaagacatagttcaacaacacttgttcctacagccaca
tcaacttacggcacagatattcccacatcagtttcttcagatatggttccaaaaatgcat
gaagtaggttcaacatcttttacatttgacaccacaagaacaactagtgacagcagtcta
aaacctataaatacatttttcaagggacttccgtcttcctctcccacatattttcattca
tcctctgtttctatcccagagaaacctgggaacgtttctgtttccacacaacctgttttg
ggttcaagtatagacacatttcagagtttattagcttctcacaataataataagtccttg
gtagattcaactaccaaactgcctgaagacagcacctggaacccaactcctgacataatt
tctcaaatttctacagtcccagtagtgacagaagaggaggactataattactcagcaagc
ggtgggttggttgaatccatatctgatatagtgagctcaggaggtgacatatctggagac
ttaaatgaaactactacagaaatgcaaacacagtttaatgttccttttgtgtcccaatta
agccaaaaaatacatgggccttatattgggcttaatgaaatgaccacaatatcccaaaat
gaatacattgttgcaacagatgaggttgaaacaagtgaggctgataacacatcagatatg
aaaatggtaatctcagcccaatcagcacatctgaccagtactcaaacttacttctctgca
tcaggcagtggagatttaattgatgcttcttcagatgatgaagtttctggtaccccctac
aatcagccacctccacgtggaccagatacacgttcattcccagatgctgataagactgct
gattctgttgtgccccctgctttcaaaacaggaagaacaacaacatccacagaggtcccc
ttatcagatgataattttcggctttcatctctcccgtctgcaacctcccagccttctgct
ttggaatctgtgactccttccacttatgcaaccaaaaagccaactgagctagctttgagt
aacaacattccctcagttgacatattgtcaatttataataaagatatgttaaccccccca
ccagcaatgatggtcagttccacaattggagcagttaatttggatgaggaagccacaaaa
tcaccctttaaaacttcccataccaccggaatggatgccatcaaaaccagtcagccaaag
caagatgacaaccaatcagtgtcaatcccattacccaccattctataccagagcattatt
gaccaacaagttgagattgttacctctaacagcaagcaagttgagactgacctaaaaaaa
ggaacacctactatggtcctgaaaatgtctcagccatcaagtagcacttccatcacaata
aaagagagagatgaacagtggtctagagccaaagatgatataagtccagacagtcccaca
ccagaaatcaatgccaacgatgatacaatcattgatgtagatactctctccattgttaca
tcttctttgctttacccaaacgtccagacagaagaagctgcaggtgtcatagcagttaca
atgacgcaacccttcgacataaaggaagacctggagggttcagggactgcaagtactact
acttttactcctacatttgcagattcagccacatattcaaccctaaccatagcatctcct
aaatatgattcaacaaaagcaaccagtaaattaaacaatgctaatgaatattcaactagc
acgatctcaagtcaacacctttccattgaacaaacttcaaaggtcatctcaacttcagta
acgtcaaacgaaatggcccagtctcacacaactgcttccccgacatactctgcagcagct
tcccaaaagtcagttgagcatgtgaagtcagacaccattaaaccacgaaaaccacagact
gaccattcttttcacaatgtatcatcaaccacaaccataacgtaccctaatacaaatggc
caaaaacccatacatccatatacttatgatgatgatttggatgatgattatccagataat
tcggggaaaaaaaacaacattgttgaatctgttcctcaactcagtacaaccacaatgcca
agtgcagacagtaatgtttttgttacatcaaagcccattgcccagaccactgagattcac
ccatctttagacaatattgaaattcagccttcagaaaaagattcagacagtaatggaact
tcatcagttagttctgatagtgaatttggagagcagataacaagcataccaaaaatggat
ggaattaaagatggaaatctctccccagataaaattcagactgtgtttaaggtaaatgca
acatcaacttcaaagactgtgactgatggaccatatcacgcttcggaccaagaaattgtg
aacaatatcaatgaaagcaatagtgaaactaccacaaggactcatcaaaagttcattgca
acatcaacagcacaagcaaaaaaccatttgtcggttccatctttatccaccacgcgttca
tcttctcatgaagaaagaaagcatgagaacagtgacttaaaaacatccccatcgctcaat
ggaataacacaattaatagcagcagaagaaacaaccacgtccaaccccacatcactgaat
ctggggcacacagttgttggcgaggctgttgaaattcctggactttattcttgcacgatg
aatgtttgtctcaatggcggatcttgctacaagaccggtagtgcctattcatgtagctgt
gctcctggttacactggtcatcaatgcgaaacagagattgatgagtgtcagtcaaacccg
tgccgcaatggagggacatgtgttgatggagtaatgagtttcacatgtgtgtgtcttcca
agctactctggattgcactgtgaagaagatactgaaacctgtgattacggctggcataag
ttccagggacactgctacaagtacttccctcaccggaaaacctgggactcagcagagaga
gagtgtcgcattcagggggctcatctaagcagcgtgctttcccacgaggagcaacagttt
gtcaaccgtctcggacaggactaccagtggattggcctaaatgataagatgtttgacagc
gatttccgctggaccgatggcagccccgtgcaatatgaaaactggaggccgaaccagcct
gacagcttctttacctctggggaggactgcgtggtgatgatatggcacgaggatggccaa
tggaacgatgttccttgcaactatcacctgacttatacctgcaaaaaaggcacagtggcc
tgcagtcaaccccccgtggtagagaacacacgtacctttggtaagaagcgtgagagatac
gaggtaaattccctcgtgaggtaccagtgccgatcaggcttcattcagaggcacattcca
accatccgctgccggggagatggacgatgggatttacctaaaatcgcctgcataagccca
tcaacttaccagcggtcatttacgagaaggcatcagcacaaaagtctctacagcatcaat
aatttcaaaagctggaacgatgacgccttccgcctccaccatccacgctatagagggaaa
agagacagaactgaaccaaagaagaggatgccgtga
DBGET
integrated database retrieval system
