Nothobranchius furzeri (turquoise killifish): 107397378
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Entry
107397378 CDS
T05163
Symbol
pcm1
Name
(RefSeq) pericentriolar material 1 protein
KO
K16537
pericentriolar material 1 protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107397378 (pcm1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nfu03037
]
107397378 (pcm1)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
107397378 (pcm1)
Cilium and associated proteins [BR:
nfu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107397378 (pcm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCM1_C
Motif
Other DBs
NCBI-GeneID:
107397378
NCBI-ProteinID:
XP_015832848
UniProt:
A0A9D3BZ52
LinkDB
All DBs
Position
Unknown
AA seq
2116 aa
AA seq
DB search
MRVGQTQKTKAASAYGQQAEAVGDMATGGPVDDPVEELHNWTVTNGSLEDRLNNMDWGIQ
QKKPNRSSENKKKLSASVVESRLTNDISPESTPGAGRRKTRTPHSFPHIKYSTQMSVPEQ
AELDKLRQRINFTDLDERSIGSDSQGRVTAANNQRQLAGENRKPHNYLPLHVNTNKSKEP
LLPSASAPTTPAITKEIKKQSPGFRDLLTLATPVRDSSRLAHSDSEQGLLLQREHVRGEP
RLDSSQVVSKLVQIRDYISKARSMRDYLVEKNDVPANVERLSLLIEHLKEQEKSYLRFLQ
TMLAQQNDGDGATLVAAVGSGSLESASLNAEVRSLDTSNTTGDRPEAVCADQREELENLR
KQHELLKKMLEQQEQLRALQGRQEALMAMQRSAEHALAVIEDAVVTETTNSVSGLSVTSE
LNDELNELIQRFHKQLHDSQTKAVPDNRHQARSLSLSREVGWPRTPHVVGPPQHRPLLHS
ASGPHTGLDTDTTAASAKLTKLQELQDKKQTMDKILRELHSLRDQTLNNNSCRGLSALCS
SSMEGSSDCPSVLCSNGAMASTSFQPLPTQRQDGSSSNKLRKLKEVHKRLNELRELVQYY
EQTSDMMVDAVNENVKEVDDEEEEDETEDGSMFETIFDSEQENRQHLTNIRNPQRSRNWA
DLNSLTNGRSVRASTTNNRNGRLNTECEINNRTAANLRSLNVATPIECQYNRDQPYDQGK
DEDEEDDYVDNDEGAQALVPDSVSESSRRSSLGNDAELTPKLHRQTAKQKLRQLQELVAM
VQSDDTDGTTANEDEALHQQPNNTRAPISGTPVDHSKKSPRDVARSSKAREKLYEEKLRQ
QKQELKQLHEERQRLIEIQGKIQDLQWACPDLQSSVSSTVSQQGLLRTAPVAVSSPAPIK
AVSSSGPKTNLAVLKATAAEAASSSVNDNEQLWSEMRRGQMLREDLRQRRMHLESLMAEQ
QRRSGLCDSPCQAEDQEDNSVQPLNRDERTMATWGSSSDHLDDDDENADDEYRSEICAEE
EEEQEECTESSSDDDVHVFSPGMNQCSHCNRKNQGSNLKPPAAFSGESCDHLHNKTQVKQ
QSRPSNQSPSQHGSIRRQENLRWPSELSFVDGTHHFQEQISQLQKQLDFSTSMCQTLLQD
QQTLSYMLQTLLTGQNSLLPNNLSSPQVQLVMHQLNQCYTQLAWQQNNVQRLKQVLNDLI
HQQQSSAAGWQTQKRVSAHESSPGPSASPGVFHPYSSTLHPSAINTMSPALSPFPPSFNL
HTPFPTATGDSFQGAAGPAAPECQKLQLDPNTSVQLEYMSFPPPLQRSPLNTATERGPAV
RLNTSYTKNITRHHAPKMELSESPTSSPVFAKRHSRQRAFDKESQGSFSSIPDPVDSTTV
TKAFKAGCKASAQANLASRSKTPKNRRRRSKGHKNMEGPDSESVSSSADFAQERAAMSHH
REQNQRLLEKLTQEKLDSKAKLGNKRNDLSSAYAWRTPFLSNRIACTEAPDASSDFSLFE
ALRETIYSEVASLISQNESRPHFLIELFHELQLLNTDYLRQRALFCLQDLVTKHLAMRSA
AEEPLPSLGPAVWTAGSQSELTPSQSLVTSDEEVVEKNLRHVQELKRKGDTESVDNDSNM
STSSILEPFANDDLGNTVIHFGNVVRIREYERMKLKAGFNHCNASAAGVNTSEASNAERA
SANPAEPVEGAAAGDVHCPQIDTQQLDRQIKAIMTEVIPFLKENMNEVCSHQLLTSVRRM
VLTLTQQNDDSKEFVRFFHKQLGGILQESLSKFEGRTLKDCGEDLLVEISEILFNELAFF
KLMQDLDSSSCGSTPAARQRHQTEKPSKTNHISQENAEGGTEKSISPATDDEDKDQDEAE
KEGSATIQEHFLQMELKSSDASEMEEEEDEGQSQGAPLSINLSKAETQALTDYGSGEDEN
DEEEMEEFEAGPVDVQTSLQVSADGQVEQNMATNSSEIREIEPEQNYNEINKSEEAVVDS
TLEEHPDVERQNPEEDSELEVAAATEEPPAGGPDVPKESVTTSSPDTDSPVLVSVDEMGS
GNTSQRSDEEDFVKVDDLPLQLTVMCEEQLQKRIVEEQQNNNLSVEILNGNPELATGLVG
NAQMLKEPETTSAQIV
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgggccagacacagaaaacaaaagcagctagcgcttacggacagcaggcggaa
gcagtgggggacatggcaacgggaggacctgtagatgatcctgtagaagagcttcacaac
tggactgtaactaatggcagtctggaagatagactcaacaacatggactggggtatacag
cagaagaaacccaatcgatcttcagaaaacaagaaaaagctgtctgcctcagtggtggag
agccgtctgactaatgacatttcaccagagtccaccccaggagccggccgcaggaaaaca
cgcactcctcattccttccctcacatcaaatactctactcagatgtctgtcccagagcag
gctgagctggataagctgcgtcagagaataaattttacagatctggatgagaggagcatc
ggaagcgactctcaggggcgcgtcacggctgctaacaaccagcgtcagctagctggagag
aacagaaagccccacaactacctacctctccatgtaaacactaacaaaagcaaagagcca
ctccttccctcggcctctgccccaaccacccctgctatcaccaaggagatcaagaagcag
agccctggtttcagggatttgttgaccctagcgactcctgtgagagactcttcgaggctc
gcccacagtgattcagagcaaggcctcctgttgcagagagagcatgtgagaggagagccg
agattagacagcagtcaggtggtgagcaagctggtccagatccgagactacatcagcaag
gccaggtccatgagggactatctggtggaaaagaacgatgtgccagccaatgtggagcga
ctctctcttctcatcgaacatctcaaagagcaggagaagtcctatttacggttcttgcag
acgatgcttgctcagcagaatgatggtgatggagcgaccctggtcgctgcagtcggctcc
ggatcgttagagagcgcttctcttaacgcagaggtccgttcgttagacacttcaaacaca
acaggtgacaggccagaagctgtgtgtgctgatcagagggaggagttggagaacctacgt
aagcagcacgagctgctgaagaagatgcttgagcagcaagaacagctcagggccctgcag
ggccggcaggaagcactaatggccatgcaacgcagtgcagaacatgcacttgctgtgatt
gaagacgctgttgtcacagaaactactaacagtgtttccggcctgagcgtaacatcagaa
ctgaatgatgagttaaatgagttgatccagcgtttccacaaacagctacatgactctcag
accaaagcagtgccagataaccgtcaccaggcacggagtctttccctctccagagaagtt
ggctggcccagaaccccccacgttgttggtccacctcaacaccggcccctccttcactct
gcgtctggcccgcacaccggtctagacacggacactactgcagccagcgccaaactcact
aagctacaagaactccaagacaaaaagcaaacaatggacaagattctacgagagttgcat
tcactcagagaccagacactaaacaataactcatgccgtggcttgtcagcactttgcagt
tcaagtatggaaggatcttcagattgtccatctgtcctctgctctaatggagccatggcg
tccacttcctttcagcctttgcccacacaacggcaggatggctcgagctccaacaagctt
cggaagctaaaggaggtccataagcgtctgaatgagctgagagaactggttcagtactat
gagcagacttctgacatgatggtggatgccgtcaatgaaaatgtgaaagaggttgacgat
gaggaggaggaggatgagactgaggatggatctatgtttgaaactatttttgactcagag
caagagaatcgtcagcatttaaccaacatcagaaacccacagcgcagcaggaactgggca
gacctgaacagcctgactaacggccgcagcgtcagggctagtacgaccaacaatcgcaat
ggccgactcaacaccgagtgcgagatcaacaatcggacagcagctaacctccgcagcctc
aacgtcgccacacccatagagtgccagtacaacagggaccaaccctatgatcaggggaag
gatgaagatgaggaggacgattatgttgataacgatgaaggggcacaggctctggttcca
gacagtgtgtcagagtccagccgaaggagcagcctcgggaatgatgcagaacttactccg
aagcttcatcgacaaacggcaaagcaaaaactcaggcagctgcaggagctggtggccatg
gttcagagtgatgacacagatggaacaacagctaatgaggatgaagctttgcaccaacag
ccaaataataccagagctccgatatccgggacgccggtggaccactccaaaaaaagtccc
agagatgtcgcccgctccagcaaggccagggagaagctgtatgaggagaagctgcgtcag
cagaagcaggagctgaagcagctgcacgaagaacgccagcgactcatcgaaatccaaggc
aagatccaggacctgcagtgggcctgccctgaccttcagtcatctgtgtccagcaccgtt
agccagcagggtttactgaggacggctcctgttgcagtctccagccccgcccccatcaag
gctgtttcatcctcgggacccaaaaccaacttggctgtgctcaaagccaccgctgcagag
gcagcttcttcctctgtcaatgataatgagcagctttggtcagaaatgcgtcgtgggcag
atgttgcgggaggatctgagacagcgcaggatgcacctggagtcattgatggctgaacag
cagaggcgtagtggtctctgcgactcaccgtgtcaggctgaagaccaggaggacaattct
gtacagcctctcaacagagatgaaagaacaatggccacctggggttccagttcagaccac
cttgatgatgacgatgaaaacgctgatgatgagtatcgctcagaaatctgtgctgaggag
gaagaggagcaggaagagtgtaccgagagcagctctgatgatgacgtgcatgtcttctca
ccaggcatgaaccagtgttcccactgtaacaggaagaaccaaggaagcaatctgaagcct
ccagcagccttctcaggtgagagctgtgaccaccttcacaacaagactcaggtgaagcag
cagtccaggccctcgaaccagtcacccagccaacatggaagcatacgtcgacaggagaac
ctgcgctggccttctgagctctcctttgttgatggtactcaccacttccaggagcaaatc
agccaactgcagaaacagctggacttcagcaccagcatgtgtcagactctcctgcaggac
cagcagacactatcctacatgctgcaaactctcctgactggtcagaacagtctgttaccc
aacaacctgtcatccccacaagtccaactggtcatgcatcagctgaaccagtgctacacc
cagctggcctggcagcaaaataacgtacagagactcaagcaggtcttgaatgacctgatc
caccagcagcagtcttcagcagccggctggcagacccagaagcgcgtctcggctcacgag
tccagccccgggccctcggcgtcccctggtgtcttccacccgtactcctctactctgcat
ccctcagctatcaacacgatgagccctgccttgtctccattccctcccagttttaacttg
cacacaccgttccccactgcgacaggcgattcctttcagggcgcggctggtccagctgct
ccagagtgtcagaagctgcagctagatcccaacacgtcggttcaattggagtacatgagt
ttccctccgccgctgcagcgctctcctctcaacacagcgacagagagaggacctgctgtc
cgacttaacacttcctacacaaagaacataactcggcatcacgcgcctaaaatggagctt
tcagagtctcccacttcctctcccgtttttgccaaacgtcactcaagacagagagcgttt
gacaaggagtctcagggaagcttcagcagtattcctgaccctgttgattccaccacagtc
acaaaggctttcaaggctgggtgcaaagcctcggcacaagccaacctggcctctcggagc
aagactcccaagaatcgacgccgcaggagcaaaggccacaagaacatggaaggccccgac
agtgaaagtgtgagcagcagtgcagactttgcccaggagagggcagccatgtctcatcac
agagagcagaatcagagactgttggaaaaactgactcaagaaaaactggacagcaaagca
aaactcgggaacaaaagaaacgacctctcctccgcctatgcttggagaacacccttcctc
tctaacagaattgcatgcacagaagcaccagatgcgagcagcgacttctcgctgttcgaa
gcactgagggagaccatttactctgaggtggcctctttgatttcccagaacgagtcgagg
cctcactttctcatcgagctctttcatgagctgcagctgctcaacacggactatttgaga
cagagagctctcttttgtctgcaggacttggtgacgaagcacctggccatgaggagtgca
gcggaggagccgttgccctccctcggccctgctgtgtggacagcaggctctcagtctgag
ctgacacccagccagagtctggttacaagtgatgaagaggtggtggagaagaacttgagg
cacgttcaggagttaaagaggaagggtgatactgaatctgtggataatgacagcaacatg
tccacctcctccatcctggagccttttgccaacgatgacctgggcaacacggtgattcat
tttggcaatgtggtgaggattagggagtatgagcgcatgaagcttaaagccgggtttaat
cactgcaacgccagcgctgcaggtgtgaacacttctgaggcttcaaacgctgaacgtgct
tctgccaaccccgctgaaccggtagaaggagctgcagctggagatgtgcactgccctcag
atcgacacccagcagctggatcgtcagatcaaagccatcatgactgaagtcattcccttt
cttaaggagaacatgaacgaggtgtgttcccaccagctgctaacatctgtgcggcgcatg
gtcctcactcttacacagcaaaatgatgacagcaaggagtttgtccgctttttccacaaa
cagctggggggcattctgcaggagtctctcagtaaatttgagggtcgtactctgaaggac
tgtggcgaggatctgttggtggagatttcagagatcctcttcaatgagctggccttcttt
aagctcatgcaggatctggacagcagcagctgtggcagcacccctgctgcaagacaaaga
caccagacggaaaagcccagcaagacgaatcacatttcacaggaaaatgcagaaggtggc
acagagaagtcgatttctccagcaactgacgatgaagataaggaccaggatgaagcagag
aaggaggggagcgccaccatccaggagcatttcctgcagatggagttgaagagcagcgac
gcctcagaaatggaggaggaggaagacgaagggcaaagtcaaggagcacccctgtcgatt
aacctttctaaggcagagacccaggctctgactgactacggtagtggggaggacgagaat
gacgaggaggagatggaggagtttgaagccggacccgtagacgtccaaacatccttgcag
gtttctgctgatggacaagtagagcagaatatggctacaaacagcagtgaaattcgggag
atagaacctgagcagaactataacgagataaacaagtcagaggaggctgttgtggattcc
actttggaggagcatccagatgtggagcgccagaatcctgaggaggacagtgaattagag
gtggctgctgctacagaggaacctcctgcagggggtccagatgtccctaaggagtcggtg
actactagcagccccgacacagactcgcctgttcttgtcagtgtggatgagatgggatca
ggaaacacgagccaaaggtctgatgaagaagacttcgtcaaggtggatgacctaccgctg
cagctgacagtcatgtgtgaggaacagctccagaagaggatcgtggaggagcagcagaat
aataacctctctgtggagatccttaatgggaaccctgagttagccacagggctggttgga
aacgctcagatgctgaaggaaccagagaccactagtgcccagatcgtgtag
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integrated database retrieval system
