Nannochloropsis gaditana: NGA_0401010
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Entry
NGA_0401010 CDS
T02917
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngd03019
]
NGA_0401010
03041 Spliceosome [BR:
ngd03041
]
NGA_0401010
Messenger RNA biogenesis [BR:
ngd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
NGA_0401010
Spliceosome [BR:
ngd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
NGA_0401010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-GeneID:
17361558
NCBI-ProteinID:
XP_005854787
UniProt:
K8Z7B6
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSGLPDDAIARAKAIAARLTASLGPEGGGGGTKRRFGDGESEEPRKREKIFIPKDNPDFN
FFSLLIGPRGSTQKRLQENTGARINIRGSDGSKGEEAPEGEPQEDMHVLIEGTEEQVAAA
KKEVEKILFDPAEAMRLKAAQLRNLAELKGGYSPGGSASGGGGDEGHYGPVRSKPGLGFG
AEPETGDMKIPSSMVGLVIGRGGENIQKITAKTGCFVQVSKETEPGENTRAVSVKGPTKE
GVAEALQMIQGQVDEAQAERSKPRAGTGGGGHYGGGGGGQSSEYGVAATLTVPVPSDKVG
LIIGRGGSTIRTIQERTGANVNIPSANQGDEPNVRLVTGGTALVMHIDQDKVGLIIGRSG
AVIKEIQHRTNTRIQVPTTAEPNTHPPVRAVTIMGPGDGPERARYEIETKLMNEGCRDAH
GNYIPYQPSPAFIVPVGPGGVPIMPGAAPPPPPQGGGYYPPPPGYQPQQPPPPGYPPPGY
PQQPAQSDPYAAYYQQQQNQGPSPAQQQQQQQQQQQQPQHQPQHQPQPQQPQQQPAYASQ
TNGGDAAAAQQQQQQAAPAPAPTSSSDSASNGAVGGEAAYDPTQYWDQFWAYAVHYGEEY
ARKQYGTWAPPEGTPPPPGISLPSAAQAMAAIAALGQTS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcctgccggacgacgcaattgcgagggcaaaggccatcgctgctcgcctcaca
gcaagcctgggtcccgagggtgggggtggaggtactaaacgacgttttggggacggggaa
tcggaagagccgcggaagcgggagaagatttttatcccgaaagacaatcctgatttcaac
ttcttcagcttgttgattggtccccggggatcaacgcaaaaacgtcttcaggaaaacacc
ggggcgcgaattaacatccgtggctcggacggttcgaaaggggaagaggcacctgaagga
gaaccgcaagaggatatgcacgtgctgatcgaaggcacggaggagcaggtagcagccgcc
aagaaggaagtggagaagattttattcgaccccgccgaagccatgcgtctcaaggcggcg
caactgcggaacctggctgaattgaaaggtggctactcgcccggcggcagcgcgagtggg
gggggcggtgacgaaggacattatggccccgtgcgctccaagccgggcctggggttcggg
gcggaaccggagacgggggacatgaagataccctcgagcatggtcgggctggtgatcgga
cgagggggtgaaaacatccaaaaaatcacggctaaaacgggctgctttgtgcaggtgtcg
aaggagacggagccgggcgagaacacgcgtgcggtgagtgtgaaaggccccaccaaggag
ggcgtggcggaggcgctgcaaatgatccaggggcaggtggatgaggcccaggcagagcgg
agcaaaccgcgcgcggggaccgggggtgggggccactatgggggcggggggggaggacag
agttccgagtacggggttgcggcgaccctcacagtgccggtgccctcggacaaagtcggg
cttatcatcggccggggcggaagcaccatccggaccattcaggagcggacaggcgccaac
gtgaacatccccagcgccaaccaaggggacgagcccaacgtccgccttgtcacggggggc
acggcgcttgtcatgcacatcgaccaggacaaagtggggctgatcatcggccggtccggg
gcggtcatcaaggagattcagcaccgcaccaatacgcgcattcaggtgcctaccaccgcc
gagcccaacacccatccccccgtgcgggctgtcaccatcatgggacccggcgacggaccg
gaacgggcgcgctacgagattgaaaccaagctaatgaacgaaggttgccgagacgcccac
ggcaactacatcccctaccagcctagccccgcctttatcgtccccgtcggtcccggcggc
gtgcccatcatgccgggggcggctcctccccctccgccccagggggggggttactaccct
cctcccccgggctatcagccccagcagccacccccgcccggatatccaccccctggatac
ccgcagcagcctgcgcagtcagatccttacgccgcttactaccagcaacaacagaaccag
ggccccagtcccgcgcagcagcaacaacaacagcagcaacaacaacaacaaccacaacat
caaccacaacatcaaccacagcctcaacagccgcagcaacagccagcatatgcttcgcaa
acgaacggtggtgatgccgccgctgcacaacaacaacaacaacaggctgctcctgctccc
gctccaacatcaagctctgactcggcgagtaatggagcagttggaggtgaagcagcttat
gatcccactcaatactgggatcaattctgggcatacgctgtgcactatggagaagaatac
gcgcgcaagcagtacggcacgtgggcaccgcctgaaggtacgccgcctcctcccggtatc
tcccttccttccgccgcgcaggccatggccgccatcgcggcactgggtcagacatcttag
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