Neorhizobium galegae bv. orientalis HAMBI 540: RG540_PA10550
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Entry
RG540_PA10550 CDS
T03244
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg02020
Two-component system
ngg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RG540_PA10550 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RG540_PA10550 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngg03021
]
RG540_PA10550 (rpoN2)
Transcription machinery [BR:
ngg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RG540_PA10550 (rpoN2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
CDN51731
UniProt:
A0A068T104
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All DBs
Position
pHAMBI540a:1096469..1098025
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AA seq
518 aa
AA seq
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MKTLSHFSPSHTQCARPSPQLIQDMRLLQMTFPELTQFVADEVEKNPLLEFTSSESENDA
ETGFETADDFAPTEGRESSAAAEVDSDWYEGSSSISTERLGEGLDTGFENVSLDDGPVRR
ADAPELLSQWKSMPGGDAGEGYDLNDSVAGQVTLRDHLNQQIPFLIVDAASRLIAQHLVD
QLDEAGYMLGDIEEIAARLGRSSENVEAILHSLQTLDPPGVFARSLSECLAIQLREKDRL
DPAMEALIRHLDLLGKRDFASLRKICGVDDEDLIDMLAEIRGLNPKPGAGFERGMSETIS
PDIVVRAAPDGGWMVELNPDTLPRVLVNHTYFQTVSKNCPKNGDVHNFLSECMQHANWLT
RSLDQRAKTIMKVATEIVRQQDVFLMHGVDHLHPLTQKTVAEAIKMHESTVSRVTSNKCM
LTPRGMFELKYFFTVSIGSAEEGGDSHSAEAVRHRIRLLIAQETPETVLSDEDIVVSLKR
GGVELARRTVAKYREAMNIPSSVQRRREKRADSRAVRF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctcagccatttttccccgagtcacacccaatgtgcgcggccatcgccgcaa
ctgatacaagacatgcggttgctgcagatgacgtttcccgaactgactcagttcgttgcc
gacgaggtggaaaagaacccgctgctcgaatttacgtcaagcgagagcgaaaacgacgcg
gaaacaggcttcgaaaccgccgacgactttgccccgaccgaaggccgcgagagttcggcg
gccgccgaagtcgatagcgactggtatgaaggctcctcctccatcagcaccgagaggctc
ggcgaagggctcgatacgggcttcgaaaacgtctccctggacgacggcccggtgcggcgc
gccgatgcgccggaactgctcagccagtggaaatccatgccgggcggcgatgccggcgaa
ggctacgacctgaatgattccgtcgccggccaggtgacgctgcgcgaccatctgaaccag
cagattcccttcctgatcgtcgatgcggccagccgcctgattgctcagcatctcgtcgat
cagctcgacgaggccggctacatgctgggcgacatcgaggagattgccgcccgcctcggc
agaagctccgagaatgtggaggccatcctgcactcgctgcagacgctcgatccgccgggc
gtcttcgcccggtcactcagcgagtgtctggcaatccagcttcgggaaaaggaccggctc
gacccggccatggaagcactgatcagacatctggatctgctcggcaaacgcgatttcgcc
tcgcttcgaaagatctgcggtgtcgatgacgaagacctgatcgacatgctggcggaaatc
cgcggcctcaacccgaagcccggcgcgggtttcgagcgcggcatgtcagagacgatttcg
ccggatatcgtcgtgcgcgcagcgcccgacggcggctggatggtcgaactcaatccggac
accctgccgcgcgttctggtcaaccatacctatttccagacggtgtcgaagaactgcccg
aaaaacggggatgtccacaacttcctctccgaatgcatgcaacatgccaactggctgacg
cgcagcctcgaccagcgggccaagacgatcatgaaggtggcgaccgaaatcgtccgccag
caggatgtcttcctgatgcacggcgtcgaccacctgcacccattgactcagaagaccgtt
gccgaagcgatcaagatgcatgaatccacggtcagccgcgtcacctccaacaaatgcatg
ctgacgccgcggggcatgttcgaactcaaatatttcttcacggtgtcgatcggctcggca
gaagaaggcggcgacagccattcggccgaggccgtgcgccaccggattcgcctgctcatc
gcgcaggagacgcctgagacggtgctctccgacgaggatatcgtagtcagcctgaagcgc
ggcggggtcgagctcgcgcgccggaccgtcgcgaagtaccgcgaggcgatgaacattcct
tcttccgtccagcgccgtcgcgaaaagcgggcggatagccgggccgtccgcttctga
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