KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103746065Help
Entry
103746065         CDS       T03372                                 

Gene name
Lig3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  
DNA ligase 3 [EC:6.5.1.1]
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
Base excision repair
Module
BER complex
Brite
KEGG Orthology (KO) [BR:ngi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    103746065 (Lig3)
Enzymes [BR:ngi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103746065 (Lig3)
DNA repair and recombination proteins [BR:ngi03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     103746065 (Lig3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 1013 aa AA seqDB search
MSLAFRILFPQNLRALGQKELHLFQEQYHQPAIRQFSHWSQTDPLRAPCLLQRRKPLSFQ
GHHLRSRATRLVFLSWSHVGLCSGPSEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQH
IADLCCKAANTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSEQAP
SSPTCKTSLSARKCDPKHKDCLLREFRKLCATVADNPSYNTKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLHLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQAEEKDPGQRRALSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDNNTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSS
QKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFTV
VAGDEGSSTTGGSSGENEGTVGSAVPRKAPKALPNKSSASAKPERKPNNPSSKGGNKQTI
NPSFVKPGEKLAMKSPVKVGVKRKATAETPGPRKVQVLLDVFTGVRLYLPPSTPDFSRLR
RYFVAFDGDLVQEFDTASATHVLGSREKNPDAQLVSPEWIWACIRKRRLIAPC
NT seq 3042 nt NT seq  +upstreamnt  +downstreamnt
atgtctttggctttcaggatcctctttccgcaaaaccttcgtgcacttggccaaaaagaa
ctccacctgttccaagaacaatatcaccagcctgccataagacagttcagtcattggtca
caaacagatccacttcgtgctccctgcctcctccagagaagaaagcccttgtcattccaa
ggacaccatctaagatcacgtgccacccgccttgttttcttgtcttggtcgcatgtggga
ctctgcagtggcccctctgagatggccgagcagaggttctgtgtggactatgccaagcgg
ggcacagctggctgcaaaaaatgtaaggagaagattgtgaagggtgtatgccgcattggc
aaagtggtgcccaatcccttctcggagtccggaggcgatatgaaagagtggtaccacatt
aaatgcatgtttgagaaactggaacgcgcacgggccaccacaaaaaaaatcgaagatctt
acagagctggaaggctgggaagagctggaagataatgaaaaggagcagatcacccagcac
attgcagatctgtgttgtaaggcagcaaacacaccaaagaagaaagctgttgtccaggct
aagttgacagccactggccaggtgacatccccagtgaaaggtgcttcgtttgttaccaat
accaatccccggaaattttctggcttttcagccaagcccaacaactctgagcaagccccc
tccagccctacatgtaagacaagtctttctgcgcgcaagtgtgaccccaagcacaaggat
tgcctgctacgtgagttccggaagctgtgtgctaccgtggctgataaccctagctacaac
acaaagacacagatcatccaggacttcttgcggaaaggctcagcaggagatggcttccat
ggtgatgtgtacctgacagtgaagctgctgctgccaggagtcattaagagcgtttacaac
ttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaacccagatgat
atggcccgcgacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcag
agcaagtcttttcccccagctgccaagagcctcctcaccattcaggaagtggatgaattc
ctcctgcacctctccaggctcacaaaagaggatgagcaacagcaggccctgcaggacatt
gcctccaggtgtacagccaatgaccttaagtgcatcatccggttgatcaaacatgatctg
aagatgaactcgggtgcaaaacatgtgttagatgcccttgaccccaatgcttatgaagcc
ttcaaagcctcacgaaacctacaggatgtggtggaacgggtacttcacaatgagcaggcg
gaggagaaggacccaggccagcgacgggctctgagtgtccaagcctcattgatgacacct
gtgcagcccatgctggcagaggcctgcaagtccattgagtatgcgatgaagaaatgtcca
aacggcatgttctctgaaatcaagtatgatggtgagcgagtccaggtacataagaacggg
gaccacttcagctacttcagccgtagtctcaagcctgtcctgcctcacaaggtggctcac
tttaaggactacatcccccaggcttttcctgggggccatagcatgatcttggactccgag
gtgctcctgattgacaacaacacaggcaaaccactgccctttgggactctgggggtgcac
aagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgtatctacttt
aatgatgtcagcttgatggacaggcctttgtgtgagcggcggaagtttcttcatgacaac
atggttgaaatccctaaccggatcatgttctcagaaatgaagcgagtcacaaaagcctca
gacttggcggacatgataaatcgggtgatccgggagggtttggaagggctggtgctgaag
gatgtgaagggtacatacgaacctgggaagcggcactggctgaaagttaagaaagattat
ttaaatgaaggggccatggctgacacagctgatctggtggttcttggggccttctacggg
caaggaagcaaaggcggcatgatgtccatcttcctcatgggctgctatgaccctagtagc
cagaagtggtgcaccgtcacaaagtgtgctggaggccatgatgatgccacacttgcccgc
ctgcaaaaggagctagatatggtgaagatcagcaaggatcctagcaagatacccagttgg
ctgaagatcaataagatctactatcctgactttattgttccggacccaaagaaggctgct
gtgtgggagatcacaggggcagaattctccaaatctgaggctcacactgctgatgggatc
tccatacgatttccacgctgcaccagaatccgggacgataaggactggaaatctgcaact
aacctcccccaactcaaggagctgtaccagctgtccaaggagaaggcagacttcaccgta
gtggccggagatgaagggagctccactactggaggcagcagtggtgagaatgagggcact
gttgggtctgctgtgccccgcaaggcccccaaagcactccccaataagtcctctgccagt
gccaagcctgaacggaagccgaataaccccagcagcaaaggcggcaacaagcagactata
aatccttcctttgtaaaacctggagagaagctggccatgaagtccccagtaaaagtgggg
gtgaagaggaaagctactgctgagactccaggcccaagaaaggtgcaagtgctgttggat
gtcttcactggggtacggctctacttaccaccctccacaccagacttcagccgtctcaga
cgctattttgtggcattcgatggggacctggtgcaagaatttgacacagcctcagccaca
catgtgctgggtagcagagagaagaaccctgatgcccagctagtctccccagagtggatt
tgggcctgtatccggaaacggagactgatagctccctgctag

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