Nannospalax galili (Upper Galilee mountains blind mole rat): 103747484
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Entry
103747484 CDS
T03372
Symbol
Wdr82
Name
(RefSeq) WD repeat domain 82
KO
K14962
COMPASS component SWD2
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103747484 (Wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103747484 (Wdr82)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103747484 (Wdr82)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103747484 (Wdr82)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
103747484 (Wdr82)
COMPASS/SET1 complex (yeast)
103747484 (Wdr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
SMN_Tudor
MinC_C
Motif
Other DBs
NCBI-GeneID:
103747484
NCBI-ProteinID:
XP_008848177
UniProt:
A0A8C6QVU9
LinkDB
All DBs
Position
Un
AA seq
313 aa
AA seq
DB search
MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaccgacagcgtgctgcggagcttccgcgtcgccaaggtgttccgcgagaac
tcggacaagatcaactgctttgacttcagccccaatggcgagacggtcatctcgagcagc
gacgacgactccatcgtgctctacgactgccaggagggcaaaccaaagagaaccctgtac
agtaagaaatatggtgtggacctcatcagatacactcacgcggcaaacacagtcgtttac
agctctaacaaaatagatgacacaattcgttatttgtccttgcatgacaacaaatacatc
agatacttccctggacatagcaaaagggtggtggccttgtccatgtcacctgtggatgac
actttcatttctgggtctcttgataagaccattcgactctgggatctccggtctcctaac
tgccagggcctcatgcatctacagggcaagccagtttgttcttttgatccagaagggtta
atttttgctgcaggtgtcaactcggaaatggttaaactttacgaccttcgatcttttgat
aagggaccatttgcaacctttaagatgcaatatgatcgaacttgtgagtggacaggactt
aagttcagcaacgatggcaaactcattctcatctccaccaacggcagcttcatccgtctc
attgatgcattcaagggagtagtgatgcacacatttgggggttatgctaacagcaaagct
gtcacactggaggcttcatttactccagattctcaatttattatgattggttcagaagat
ggcaagatccatgtctggaatggagagagtggtataaaagtagctgtgctggatggtaaa
cacacgggtcccattacctgtctgcaattcaaccccaagttcatgacctttgccagtgca
tgttccaatatggccttctggttacccaccattgatgactga
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