Nannospalax galili (Upper Galilee mountains blind mole rat): 103749363
Help
Entry
103749363 CDS
T03372
Symbol
Cnot6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103749363 (Cnot6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103749363 (Cnot6)
Enzymes [BR:
ngi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103749363 (Cnot6)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103749363 (Cnot6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103749363 (Cnot6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
103749363
NCBI-ProteinID:
XP_008850451
UniProt:
A0A8C6QMN9
LinkDB
All DBs
Position
Un
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSCIPSDIAKLHNLVYLDLSHNQIQSLPAELGNMVSLRELHLNYNQLRVLPFELGKLF
QLQTLSLKGNPLTQDILNLCLEPDGTRKLLNYLLDNLSGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKIEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSPKSSVLGECGAIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMTNGRITHGFKLKSAYENGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPLLPQVNGIHPSGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgacccccggaggatgtacacaattatgtcctct
gaggaagcagcaaatggaaagaaatcacattgggcagagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgcatctgagtgac
aattccctgtcctgtattccttcagacattgccaagcttcacaatctggtatatctggac
ctgtcccataatcaaatccagagtttaccggcagaactcggaaacatggtatcactcagg
gagctccatttaaattacaaccagttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaagcctgaaaggaaatccacttacccaggatatattaaacctctgt
ctggaaccagatggaacaaggaagctactgaactatttgcttgataatttgtcaggtact
gcaaaaagaatttcaacagaacaaccccctccaagatcttggatcatgttacaagaacca
gacagaacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctattgtccatcatgggcactaaattgggactacagg
aaaaaggccatcattcaagaaatcttgagctgcaatgccgatattataagtcttcaggag
gttgaaacggaacagtattacagtttttttctggtagagctgaaagaacgtggctataat
ggattctttagtcctaaatctcgagctaggacgatgtcagagcaagagagaaaacatgtt
gatggctgcgcaatattcttcaagatagaaaaatttactttggttcagaaacacactgta
gaatttaatcagctagcaatggcaaattcagaagggtctgaagctatgctgaatagagtc
atgacaaaagataacattggagttgcagtactactagaacttcgaaaggaattgattgaa
atgtcatctggaaaaccacatcttggaacagaaaaacaacttattcttgtggctaatgct
catatgcattgggaccctgaatactctgatgtgaagttggtacaaactatgatgttcctc
tcagaagtgaaaaatattattgataaagcctctcgaagccccaaatccagtgtactggga
gaatgtggagctattccacttgtgctgtgtgcagatctgaattctttgccagactcgggt
gttgtagaatatttgagcaccggcggagtagaaacaaatcataaagactttaaggaactg
agatataatgaaagtcttacaaatttcagctgtaatgggaagaatggaatgaccaatgga
agaatcactcatggtttcaagttgaagagtgcctatgagaatggcctgatgccttacaca
aattacacatttgatttcaagggtataattgactacatcttctactctaaacctcagctg
aacacattagccatcctggggcctctggaccaccactggctagtggagaataacatcagc
ggctgcccacacccactgattccctccgaccacttctctctgtttgcacaattggagctc
ttactgcctctcctgccccaagttaatggcattcacccttccggcaggaggtag
DBGET
integrated database retrieval system
