Nocardiopsis gilva: CDO52_08245
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Entry
CDO52_08245 CDS
T05022
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv00020
Citrate cycle (TCA cycle)
ngv00630
Glyoxylate and dicarboxylate metabolism
ngv00785
Lipoic acid metabolism
ngv01100
Metabolic pathways
ngv01110
Biosynthesis of secondary metabolites
ngv01120
Microbial metabolism in diverse environments
ngv01200
Carbon metabolism
ngv01210
2-Oxocarboxylic acid metabolism
Module
ngv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ngv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CDO52_08245
00630 Glyoxylate and dicarboxylate metabolism
CDO52_08245
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CDO52_08245
Enzymes [BR:
ngv01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CDO52_08245
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
CDO52_08245
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
CDO52_08245
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
CDO52_08245
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ASU82774
UniProt:
A0A223S3R2
LinkDB
All DBs
Position
complement(1754687..1758349)
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AA seq
1220 aa
AA seq
DB search
MSSEASQPLTDFGPNEWLVEELYQKYLHDPNSVDKAWWNFFADYKAGTTKADGATGAKPG
AAATSATPTSGAAAKPAPAPKKSAASTPTGEAGPADDALKVQEERLRGAPARTATNMESS
LTLPTATSVRAVPVKLLFDNRIVINNHLRRARGGKVSFTHLIGYAMVKALKSMPEMNHSY
VEVDGKPGVAKPEHVNFGLAIDLQKPDGSRQLVVPSIKRADEMDFKEFWSGYEDLVRKAR
NNKLGVPDFQGTTISLTNPGGIGTVHSVPRLMPGQGVILGVGSMEYPAEFQGMSVETLND
LAVSKVMTLTSTYDHRIIQGAQSGEFLRRIHQLLLGEDGFYDEIFKSLRLPYEPVRWVQD
ISVDPSNQLDKASRVQELIHAYRVRGHLMADTDPLEYKQRRHPDLDVLQHGLTLWDLERT
FPTGGFGGKQVMKLRDVLGVLRDTYCRTVGIEYMHIQSPEEREWIQSHVEREHEKLGRDE
QLHILRRLNSAEAFETFLQTKYVGQKRFSLEGGESLIPLLDGVISRAAKAELDEVVIGMA
HRGRLNVLANICGKSYAQIFGEFEGNMDPRSAHGSGDVKYHLGTEGTFESPDGEKIAISL
AANPSHLEAVDPIAEGIVRAKQDILDKGPHGFTVLPLLIHGDAAFAGQGVVAETLNLSQL
RGYRTGGTVHVIVNNQVGFTTSPTDSRSSVYATDVARMVQAPILHVNGDDPEAVVRVAHL
AFAYRQAFNKDVVIDLVCYRRRGHNESDNPHFTQPLMYNIIDAKRSTRKLYTEALIGRGD
ISVEDAEAALRDYQHELERAFAETREADKKPVEPGSVIKPEMFDEGRIDHTAVTTATTDE
AVKQIIETQVSLPEGFTPHPRLQPQLARRAQMAEDDALDWATGEMLAFGSLLLEEHPVRL
VGQDSRRGTFGQRHAALVDRSTGDVHTPLKRFDKGTSKFYVHDSLLSEYAALGFEYGYSV
VRPDALVAWEAQFGDFVNGAQSVIDEYISASEQKWGQRSSVVLMLPHGYEGQGPDHSSAR
IERFLQLCAQENMTVAMPTTPANYFHLLRWQVKSPYRRPMVVFTPKSMLRNKVATSAVAD
FTGETSFQPIIPDTTDIKPKDVRRVVLCSGKVYYDLDAARKRTGDTHTALIRVERLYPLP
IEEIRQQLSAFPNAGEVLWVQEEPANMGPWPFVALVFSEQLDRPFTRVSRPAGSSPAAGS
GKRHEVEQQALINTVFPPAD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctgaggcgtctcaacccctgacagatttcggccctaatgagtggctggtcgag
gagctctaccagaagtacctccacgacccgaactcggttgacaaggcttggtggaacttc
ttcgccgattacaaggcgggcaccaccaaggccgacggcgcgaccggcgctaagccgggc
gccgcagccacgtccgccaccccgacctccggtgccgccgcgaagccggcccccgcaccc
aagaagtcggcagcatcgaccccgaccggtgaggccggtcccgcggacgacgctctgaag
gtccaggaagagcggctgcgcggcgcacctgcccgcaccgccaccaacatggagtccagc
ctcaccctgccgacggccaccagcgtgcgcgccgtgccggtgaagctgctcttcgacaac
cgcatcgtcatcaacaaccacctgcgacgcgcccggggcgggaaggtctccttcacccac
ctcatcggctacgccatggtgaaggcgttgaagtcgatgccggagatgaaccactcctac
gtcgaggtcgacggcaagccgggcgtcgcgaagcccgagcacgtcaacttcggcctcgcc
atcgacctgcagaagcccgatggctcgcgccagctcgtggtgcccagcatcaagcgcgcc
gacgagatggacttcaaggagttctggagcggctacgaggacctggtccgcaaggcccgc
aacaacaagctgggcgtgccggacttccagggcaccacgatcagcctgaccaaccccggc
ggcatcggcaccgtccactccgtgccgcgcctcatgccgggccagggcgtcatcctcggc
gtcggctccatggagtacccggccgagttccagggcatgtccgtggagaccctgaacgac
ctggccgtcagcaaggtcatgacgctgacgtccacctacgaccaccgcatcatccagggc
gcccagtcgggcgagttcctgcgccgcatccaccagctgctgctgggcgaggacggcttc
tacgacgagatcttcaagtcgctgcgcctgccctacgagccggtgcgctgggtccaggac
atctcggtcgacccgagcaaccagctcgacaaggccagccgggtccaggagctcatccac
gcctaccgggtccgcggccacctcatggccgacaccgacccgctggagtacaagcagcgc
cgccaccccgacctcgacgtcctgcagcacggcctgacgctgtgggacctggagcgcacg
ttcccgaccgggggcttcggcggcaagcaggtcatgaagctgcgcgacgtgctcggtgtg
ctgcgcgacacctactgccgcacggtcggcatcgagtacatgcacatccagagcccggag
gagcgggagtggatccagtcgcacgtcgagcgtgagcacgagaagctcggccgcgacgag
cagctgcacatcctgcgccggctcaacagcgccgaggccttcgagaccttcctgcagacg
aagtacgtcggccagaagcggttctcgctcgagggcggcgagtcgctgatcccgctgctc
gacggcgtcatctcgcgagccgccaaggccgagctggacgaggtcgtcatcggtatggcg
caccgcggccgcctcaacgtcctcgccaacatctgcggcaagtcctacgcccagatcttc
ggcgagttcgagggcaacatggacccgcgcagcgcccacggatccggggacgtcaagtac
cacctgggcaccgagggcacgttcgagtcgcccgacggcgagaagatcgcgatctcgctg
gcggccaaccccagccacctggaggcggtcgacccgatcgccgagggcatcgtccgcgcc
aagcaggacattctcgacaagggcccgcacggcttcaccgtgctgccgctgctgatccat
ggcgacgcggccttcgcgggccagggtgtcgtggccgagaccctcaacctgtcgcagctg
cgcggctaccgcaccggtggcaccgtgcacgtcatcgtgaacaaccaggtcgggttcacc
acctccccgaccgacagccgctccagcgtgtacgcgaccgacgtcgcgcggatggtgcag
gcgccgatcctgcacgtcaacggggacgaccccgaggcggtcgtgcgggtggcgcacctg
gccttcgcctaccggcaggcgttcaacaaggacgtcgtcatcgacctcgtctgctaccgc
cgccgcggccacaacgagtcggacaacccgcacttcacgcagccgctgatgtacaacatc
atcgacgccaagcggtccacccggaagctgtacaccgaggccctgatcggccgcggcgac
atctccgtggaggacgccgaggcggcactgcgcgactaccagcacgagctggaacgcgcg
ttcgccgagacgcgtgaggcggacaagaagccggtcgagccggggtcggtcatcaagccc
gagatgttcgacgagggccggatcgaccacaccgccgtcaccaccgcgaccaccgacgag
gccgtcaagcagatcatcgagacgcaggtgagcctgcccgagggcttcaccccgcacccg
cggctgcagccgcagctggcgcgccgtgcgcagatggccgaggacgacgctctcgactgg
gccaccggcgagatgctggcgttcggctctctgctgctggaggagcaccccgtccggctg
gtcggccaagacagccgccgcgggacgttcggccagcggcatgccgccctggtcgaccgc
agcaccggtgacgtgcacacgccgctcaagcggttcgacaagggcacgtccaagttctac
gtgcacgactccctgctgagcgagtacgcggcgctgggcttcgagtacggctactcggtc
gtgcgccccgacgccctggtggcgtgggaggcccagttcggcgacttcgtcaacggcgcg
cagagcgtcatcgacgagtacatcagcgccagcgagcagaagtgggggcagcgctccagc
gtcgtcctgatgctgccgcacggctacgagggccagggcccggaccactcctcggcgcgc
atcgagcgcttcctgcagctgtgcgcccaggagaacatgaccgtggccatgcccacgacc
ccggcgaactacttccacctgctgcgctggcaggtcaagtcgccctaccgccgtccgatg
gtggtgttcacgccgaagtcgatgctgcggaacaaggtcgcgacgtcggcggtggcggac
ttcaccggggagacctccttccagccgatcatccccgacaccaccgacatcaagccgaag
gatgtccggcgcgtggtgctgtgctccggcaaggtgtactacgacctggacgcggcccgg
aagcgcaccggcgacacgcacaccgccctgatccgggtggagcgcctgtacccgctgccg
atcgaggagatccggcagcagctgtccgccttcccgaacgcgggcgaggtcctgtgggtg
caggaagaaccggcgaacatgggcccgtggccgtttgtggcactggtcttctccgagcag
ctggaccgccccttcacgcgggtgtcgcgaccggccggctcctccccggccgccggctcc
ggcaagcggcacgaggtcgagcagcaggcgctcatcaacacggtgttcccgccggcggac
tag
DBGET
integrated database retrieval system
