Nocardiopsis gilva: CDO52_09675
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Entry
CDO52_09675 CDS
T05022
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ngv
Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngv03016
]
CDO52_09675
Enzymes [BR:
ngv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDO52_09675
Transfer RNA biogenesis [BR:
ngv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDO52_09675
Prokaryotic type
CDO52_09675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
MDMPI_N
Motif
Other DBs
NCBI-ProteinID:
ASU83019
UniProt:
A0A223S4R5
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All DBs
Position
2092166..2093059
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AA seq
297 aa
AA seq
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MADSGVVIVDKPADWTSHDVVARVRRLAKTRKVGHAGTLDPMATGVLVLGIEKGTKLLGH
LALTEKVYEATLRLGLATTTDDAEGELGPRVDAAQVDDERIRAGAAALTGAIEQVPPQVS
AIKVNGKRAYKSARAGEAVELKARPVTVSEFAIGDIRRVADAEGTLIDIDARITCSSGTY
IRALARDLGDALGVGGHLTALRRTRVGPYDLSQARTLDQLAEEFTALPLAQAVAAAFPVR
VLNDAETRKIAHGNRIAPGELGSGPIGLFAPDGTVVALAEDTARYSKPIVVFEPAGS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtggcgtcgtcatcgtcgacaagcccgccgactggacgtcgcacgacgtc
gtcgcgcgggtgcggcggctcgccaagacccggaaggtcggccacgccggaacgctcgac
cccatggccaccggtgtgctggtcctcgggatcgagaagggcaccaagctgctcggccac
ctcgccctgacggagaaggtctacgaggccaccctccggctgggcctggccaccaccacg
gatgacgccgagggagagctcggcccgcgggtggacgcggcgcaggtcgacgacgagcgc
atccgtgccggtgccgccgcgttgaccggggccatcgagcaggtcccgccgcaggtcagc
gcgatcaaggtgaacggcaagcgggcttacaagtcggcgcgcgccggggaggcggtcgag
ctcaaggcgcgtccggtgaccgtgtcggagttcgccatcggcgacatccggcgcgtggcc
gacgccgagggcacgctgatcgacatcgacgcccgcatcacctgctccagcggcacctac
atccgcgccctagcccgcgacctgggggacgcgctcggggtgggcggccacctcactgcg
ctgcgccgcacgcgggtgggcccctacgacctctcccaggcccgcaccctggaccagctg
gccgaggagttcaccgcgctgccgctcgcccaagcggtggcggccgcgttcccggtccgt
gtcctcaacgacgcggagacccgcaagatcgcgcacggcaaccgcatcgccccgggcgag
ctggggtccgggccgatcggcctgttcgcgccggacggaaccgtggtcgccctggccgag
gacaccgcccgctacagcaagcccatcgtcgtgttcgaacccgcgggaagctga
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