Nitrobacter hamburgensis: Nham_0092
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Entry
Nham_0092 CDS
T00348
Name
(GenBank) exodeoxyribonuclease III (xth)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nha
Nitrobacter hamburgensis
Pathway
nha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nham_0092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nha03400
]
Nham_0092
Enzymes [BR:
nha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Nham_0092
DNA repair and recombination proteins [BR:
nha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Nham_0092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABE60993
UniProt:
Q1QS04
LinkDB
All DBs
Position
107936..108817
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AA seq
293 aa
AA seq
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MDTRVKPAYDGKQTCRRLRQKSMQITLTTWNVNSVRLRIDLVAKFLKAQRPDVLCLQETK
CPDDAFPLKRFRRLGYEHVALNGQKGYHGVAVVSKLPFDASNIRTFCDKIDSRHVGVTLG
GEAGLAAPLVLHNFYVPAGGDIPDPALNPKFAHKLQFLDEMKACTPLHPRDGDRHVLVGD
LNVAPHEHDVWSHKQLLKIVSHTPVECEKLLGLQSHGNWVDIARARIPMSEKVYTWWSYR
AADWVAANRGRRLDHIWVSEALRGGIRDFRITRAARGWERPSDHVPVTAVIEV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcgggtcaagcccgcgtatgacggcaagcaaacttgtcgacggcttcgccag
aaatccatgcagatcaccctcacgacctggaatgtcaattcggtgcggctgcgcatcgat
ctcgttgcgaagtttctgaaagcgcaacggccggacgtgctgtgcctgcaggagaccaaa
tgccccgacgacgcctttccgctgaaacgcttccgccggctcggctatgagcacgtcgcg
ctcaacgggcagaagggctatcacggggtcgccgtggtctcgaagctgccgttcgacgcc
agcaacatccgcaccttctgcgacaagatcgattcacgccatgtcggcgtgaccctcggc
ggcgaggcgggtctcgccgcgccgctggtgctgcacaacttctatgtgccggcgggcggc
gacattcccgaccccgcgctcaacccgaagttcgcccacaagctgcaattcctcgacgag
atgaaagcctgcacaccgctgcatccgcgcgacggcgaccgccatgtcctggtcggcgac
ctcaatgtcgcgccgcatgagcacgacgtctggtcgcacaagcaactcctgaagatcgtc
tcgcacacgccggtcgaatgcgagaagctgctcggcttgcagagtcacggcaactgggtc
gacatcgcgcgcgcgcggattccgatgtcggagaaagtctatacgtggtggagctatcgc
gccgccgactgggttgccgccaatcgcggccgcaggctcgatcacatctgggtttcggag
gcgctgcgcggcggaatccgggacttccgcatcacccgcgccgcccgcggctgggagcgt
ccgtccgatcatgtgccggtgacggcggtgatcgaggtatga
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