Nitrobacter hamburgensis: Nham_4049
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Entry
Nham_4049 CDS
T00348
Name
(GenBank) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
nha
Nitrobacter hamburgensis
Pathway
nha00630
Glyoxylate and dicarboxylate metabolism
nha00710
Carbon fixation in photosynthetic organisms
nha01100
Metabolic pathways
nha01110
Biosynthesis of secondary metabolites
nha01120
Microbial metabolism in diverse environments
nha01200
Carbon metabolism
Module
nha_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Nham_4049
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Nham_4049
Enzymes [BR:
nha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Nham_4049
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Gene cluster
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ABE64713
UniProt:
Q1QGD4
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Position
p1:7266..8732
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AA seq
488 aa
AA seq
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MNVLNEKSLTVRGKDRYKSGVMSYKKMGYWEPDYTPKDTDIICLFRVTPQDGVDPIEAAA
AVAGESSTATWTVVWTDRLTAAEKYRAKCYRVDPVPGAEGQYFAYIAYDLDLFEPGSISN
LTASVIGNVFGFKPLKALRLEDMRLPVAYVKTFKGPPTGIVVERERLDKFGRPLLGATVK
PKLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNRAQAATGEI
KGSYLNVTAATMEDMYERAEFAKELGSVVVMIDLVIGYTAIQSMSNWARKNDMILHLHRA
GHSTYTRQRNHGVSFRVISKWMRLAGVDHIHAGTVVGKLEGDPLTTRGYYDICREEHNPM
QLEHGIFFDQNWASLNKMMPVASGGIHAGQMHQLIQHLGEDVVLQFGGGTIGHPMGIQAG
ATANRVALEAMILARNEGRDYVSEGPDILAKAAASCTPLKQALEVWKDVTFNYQSTDAPD
YVTTPAVA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccttaacgagaagtcgctgacggttcgcggcaaggaccgttataaatccggt
gtcatgtcctacaagaagatgggctattgggagcccgactatacgccgaaggacacggac
atcatttgtctgtttcgggttacgccgcaggacggcgtcgacccgatcgaagcggctgcg
gcggtggccggcgaatcctcgaccgcgacctggaccgtggtgtggacggaccgtctcacg
gcggcggagaaatatcgcgccaagtgctaccgcgtcgatccggtaccgggggcggaaggc
cagtacttcgcctatatcgcctacgatctcgacctgttcgaacccggttcgatctccaac
ctcaccgcgtcggtcatcggtaacgtgttcggcttcaagccactcaaggccttgcgcctc
gaggacatgcggttgccggttgcctacgtcaagacgttcaaagggccgcccaccggcatc
gtcgtcgagcgcgagcgtctcgacaagttcggccggccgctgctcggcgccaccgtcaag
ccgaagctcggcctgtccggccgtaattacggccgcgtggtctatgaggcgctgaagggc
ggtctcgacttcaccaaggacgacgagaacatcaactcgcagccgttcatgcactggcgt
gaacgtttcctctactgcatggaagcggtcaaccgcgcccaggcagcgaccggcgagatc
aagggcagctacctcaacgtcaccgcggcgacgatggaggacatgtacgagcgtgccgag
ttcgccaaggagctagggtcggtggtcgtcatgatcgatctggtgatcggctacaccgcg
atccagtcgatgtcgaactgggcgcgcaaaaacgacatgatcctgcatctgcatcgcgcc
ggtcattcgacctacacgcggcagcgcaatcacggcgtgtcgttccgcgtcatctccaaa
tggatgcggctcgccggtgtcgatcacatccacgccggaaccgtggtcggcaagctggaa
ggcgatccgctgaccacgcgcggctactacgatatctgccgcgaagagcacaatccgatg
caactcgagcatggcatcttcttcgaccagaactgggccagcctcaacaagatgatgccg
gttgcttccggcggcattcatgccggccagatgcaccagctcatccagcatctcggtgaa
gacgtggtgttgcagttcggcggcggcaccatcggtcacccgatgggcatccaggccggc
gcgaccgccaatcgcgtggcgctggaggcgatgatcctcgcccgcaacgagggccgcgat
tacgtcagcgaaggtccggatatcctggccaaggcagccgcaagctgcacgccgttgaag
caggcgctcgaagtgtggaaggacgtcaccttcaactaccaatccaccgacgcgcccgat
tatgtaacgaccccggccgtagcgtaa
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