Fusarium vanettenii: NECHADRAFT_38892
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Entry
NECHADRAFT_38892 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
nhe
Fusarium vanettenii
Pathway
nhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NECHADRAFT_38892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_38892
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NECHADRAFT_38892
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Nucleoporin_N
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
9670864
NCBI-ProteinID:
XP_003051883
JGI:
38892
UniProt:
C7YNT0
LinkDB
All DBs
Position
4
AA seq
612 aa
AA seq
DB search
MDDTRDKNKAVLFAYLTARPSGPVTDYGATITHWQHDRVPNYRGGYAGEAERPSASYIVD
MLPPAARVTRAGDSIPIKHLHSSLNKIKHPINVVRWTPEGRRLLTASTSGEFTLWNGTGF
NFETIMQAHDSAIRALEYSHSDDWLISADHDGVIKYWQPNFNNVQSINAHTDPIRDLAYS
PNDSKFVTASDDSTLKIFDFAMGQMESKLEGHGWDAKSVDWHPTKGLLVSGSKDHLVKLW
DPRTSRCLTTLHGHKSTITKVVFEKVRGACLATSARDQTARVFDLRMMRDICLLKGHEKD
ISTLTWHPIHPNFLSTGGMDGSLFHYLLDSPNPPPGQPFTVAPYDSPDPTSVPAQSVWPM
HKVPFAHDYAIWSLDWHPLGHILASGSNDRITRFWSRARPGDTEVFQDRYHIGEAAAEAQ
GTWDRRGNRRQRQEEEQQEMEDEMDALVDQDAPKLAVPGLPGIPGLPLGGGVPGLGSAVP
PPPIPGVGAGSGAPPPPLPFPLPGLNGAPPPPLPGLDPNNPPDPAQLIELMKKAGVPLPP
PGALPPGLIPGVIPPPGSMPPPPGNFPLPVPPPPLPGLDADLKGDNRRRAPLPSQEESLR
QEQRQGKYTRAR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacgagagacaagaacaaagcggtgttgttcgcatatctaaccgctagacct
tcaggaccggtgactgactacggcgcaaccatcactcattggcaacatgatcgcgtcccg
aactacagaggaggctatgccggcgaggccgaacgacccagcgccagctatatcgtcgat
atgctcccccctgcagctcgagttaccagagctggcgatagcattccaatcaagcatctc
cactcatcgctgaacaaaatcaagcaccctatcaatgtggttcgctggacaccagagggt
cgcagactgttgacggcctctactagtggcgagttcaccttgtggaacggaacgggcttc
aactttgaaaccatcatgcaggcccacgactcggctatccgtgctcttgaatactcgcac
agcgacgattggctcatctcggccgaccatgacggagtcatcaagtactggcagccaaac
ttcaacaacgttcagagcatcaacgctcacaccgaccccattcgagacctcgcctacagc
cccaacgactccaagtttgtcactgccagtgacgactctaccctcaagatcttcgacttt
gccatgggtcaaatggaatccaagctcgagggtcacggttgggatgcgaagagtgtcgat
tggcatcctaccaagggcttgcttgtttctggttccaaggatcacttggtcaagctgtgg
gatcctcgcaccagtcgctgcctcacgactctccatggccacaagagtaccatcaccaag
gttgtttttgaaaaggttcgcggcgcttgcctggcaacttctgcccgagaccagactgcc
cgagttttcgatctccgcatgatgcgcgacatctgcctcctgaagggccatgagaaggac
atttccactctcacctggcatcccatccaccccaacttcctcagcactggtggtatggat
ggttcactcttccactacctcttggactcacccaacccaccccctggccagcctttcacc
gttgcgccttacgacagcccagacccaacttcagttcctgctcagtccgtttggcccatg
cacaaggtcccctttgctcatgactacgccatctggtctctggattggcatcctctcggt
cacattcttgcttcaggctccaacgaccgtattacgcgattctggagccgtgctcgacca
ggtgataccgaagtctttcaggatcgctaccacatcggcgaggcggctgccgaggctcag
ggaacctgggaccgccgcggcaaccgacgtcagcgacaggaggaagaacagcaggagatg
gaagacgagatggatgctttggtcgaccaagatgctcccaagcttgcagtccctgggctt
cccggaattcctggtcttcctcttggtggaggagtgcctggtcttggatcagctgtccca
ccacctcctattcctggtgttggcgcaggctcaggtgccccccctcctcctctgcccttc
cccctgccaggcctcaacggagctcccccacctcctctgcctggtcttgatcccaacaac
cctcctgatcccgcccagctcatcgagctcatgaagaaggccggcgtccctctgcctccc
cctggagctctgccacccggtctcattccaggagtcattccacctcctggcagcatgcct
cccccgcctggcaactttcctctcccagtgccacctccacctctgcctggcttggatgcc
gacctcaagggcgacaaccgacgacgggctccattgccaagccaggaagagagcctgcga
caggagcagcgccaaggcaagtacacacgggcgaggtag
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