Fusarium vanettenii: NECHADRAFT_43928
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Entry
NECHADRAFT_43928 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nhe
Fusarium vanettenii
Pathway
nhe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NECHADRAFT_43928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhe03400
]
NECHADRAFT_43928
Enzymes [BR:
nhe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NECHADRAFT_43928
DNA repair and recombination proteins [BR:
nhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NECHADRAFT_43928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
LIG3_BRCT
mRNA_cap_enzyme
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
9673470
NCBI-ProteinID:
XP_003044829
JGI:
43928
UniProt:
C7Z9K8
LinkDB
All DBs
Position
6
AA seq
991 aa
AA seq
DB search
MGSQQEQRPQTEDAKHEDEIQYGTVGITQEEMEEKYPNRPKNHSKTLVFSELFRELFNPL
SENKKQNATGAGPRKAFRGVNKLSPHEQRRHIIERFIIRWRKEVGPDFYPALRLILPDKD
RDRGVYGLKENAIGKLLVKLMKIDKSSEDGYNLLHWKLPGQTTASRLAGDFAGRCFEVIS
KRPMRTTVGTMTIAEVNEQLDKLAASTGETENLRIFETFYNHMNAEELMWLIRIVLKQMK
VGATEKTFLDLWHPDGDALFSVSSSLRRVCWELSDPEIRLEQDEAGVALLQCFQPQLAQF
QMPASFQKMIQLLRPTEEDPEFWIEEKLDGERMQMHMVEDKKHPGGRRFCFWSRKAKDYT
YLYGDGLQDENSSLTRHLKKAFASGVKNLILDGEMITWDMGVDKIVPFGTLKTAALAEQQ
NKSDTNSAGHRPLFRVFDILYLNNKPLTQYTLRDRHRALEKAVKSVHRRLEIHNYTSATT
SDAIEPLLREVVANASEGLVLKNPRSMYRLNHRNDDWLKVKPEYMSEFGESLDCVIIGGY
YGSGKRGGMLSSYLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWI
EWDQKNPPSEYIELGGGELRQYERPDMWIRPKDSVVVSVKAASVGPSDQFARGFTLRFPR
FRRLRLDRTWDTALSLEEFQELKDRVDEESKEKAMTVEDRKRRNPKRIKRELVIAGEDSA
PVEFEGEKTKLFEGLEFCVLSEALKPYKKTKTQLESIIKENGGTISQRAAPGTNMVLIAD
KKVVKVASLMKGGDVDLIRPKWIKDCLEQDLGQFLLPFEESHLFHATEAMKRAAEQNTDQ
FGDSYARDMSIDELKDLMDCMPKIEDGEPFNKNEFLQQLEDHGKDLGNLRSFIFRRCVVL
FHGVDTGINRVSRLKHFVKYGGGSVTEDAGDLSVTHVVIEGGDPMQMGEAADMVRKELSS
RRTQPRVVAGKWIEDCWKEGTLLDEEQFVVP
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcaacaggaacaaagaccccagaccgaagatgcgaaacatgaagatgagatt
cagtacggcacagtaggaattacccaggaggaaatggaggaaaaatatccgaaccgccca
aagaatcactcaaagaccctagtcttctctgagctgtttcgagagttgtttaatccatta
agcgaaaacaagaagcaaaatgccaccggcgcaggccctagaaaggcattcagaggtgtc
aataagctctcaccccacgagcagcgacgacacattatcgagcgcttcatcattcgatgg
cgcaaagaagtcggtcccgatttctaccctgccctgcgtctaattctccccgacaaggat
cgcgatcgaggtgtttacggcctcaaggagaatgcaataggaaagctcctggtcaagttg
atgaagatcgacaagagctccgaggatggctacaatcttttgcactggaagttacctggt
caaaccactgcctctcgcctggctggcgactttgctggacgatgcttcgaggtcatttcg
aagcgcccgatgcgcacaactgtcggtaccatgacaatcgctgaggtcaacgagcagctg
gataagcttgctgcgtctacaggagagacagagaatctgcgtatctttgagactttctat
aaccacatgaatgccgaagagttgatgtggcttattaggatcgtcttgaagcagatgaag
gtcggcgccacggaaaagacctttttggatctctggcacccggacggcgacgccctcttc
agcgtgtcttcgagcttgagacgagtatgttgggaactttccgaccccgagattcggctc
gagcaggatgaggcgggcgttgccctcttgcaatgcttccaaccgcaacttgcccaattc
cagatgcctgcgtcttttcagaaaatgattcagcttctccgaccgacagaggaggaccct
gaattctggatcgaggagaagctggatggcgagcgtatgcaaatgcacatggtcgaggac
aaaaagcaccctggcggccgaaggttttgcttctggtcaagaaaggccaaggactacaca
tacctctacggcgacggacttcaagacgagaactcgagtttaacacggcatctcaagaag
gcctttgcatcaggtgtcaagaatctgattctggacggcgagatgattacctgggatatg
ggcgttgacaagatagtccctttcggcactctcaagacggccgctctcgcagagcagcag
aacaagtcggatacaaactcggctggtcaccgtcccctattcagggtctttgatatcctc
tacctcaacaataagcccttaactcagtataccctccgagatcgacaccgcgctctagaa
aaggccgtcaaatctgttcatcgacgtcttgaaattcacaactacaccagcgcaacaact
tctgatgctattgaaccacttctccgcgaagttgttgccaacgcgtcagaaggtctcgta
ctcaagaatcctcgttcaatgtaccgcctcaatcaccgaaacgacgattggctcaaggtc
aaacctgaatacatgtccgagttcggcgagtccctcgactgtgtcattatcggtggctac
tacggctcagggaagcgcggcggaatgctttcgagttatctgtgtggtctacgagtgaca
cagaaccacatccaagcgggcgcaaatcctgaaaagtgcttcagttttttcaaggtcgga
ggtggattccgtgccgaagactatgcagaaatccgacaccgaacagaaggaaagtggatt
gagtgggatcaaaagaacccgccctcagaatacatcgagcttggaggaggtgagctcaga
cagtatgaacggccagacatgtggattcgtcctaaagactcggtcgttgtttcagtgaaa
gcagcgagcgttggtccttcagaccagtttgctcgtggattcactttgcgcttcccacga
ttcaggcgtctccgtttggatcggacatgggacactgccctatccctagaggagtttcag
gagctgaaagatcgggttgatgaagagtcaaaagagaaggccatgacggttgaagacaga
aagagacggaatcccaaacgaatcaagagggagcttgttatagctggagaagattcagcg
ccggtcgagtttgagggcgagaagacgaagctttttgaagggttggagttttgcgtcctt
tctgaagctctgaagccctacaaaaagactaaaacccaactcgagtccattatcaaagaa
aacggaggtaccatttctcaaagagcggcaccaggtacaaacatggtgcttattgccgac
aagaaggtggtcaaagtggcgagtctcatgaaaggaggagacgtggaccttatccgtccc
aaatggatcaaagattgcctggagcaggatctgggacaatttctgctgccgtttgaggaa
tcacacttgtttcacgctacagaagcgatgaagcgcgcggcggagcagaacacggatcag
tttggagacagctacgctcgagacatgtccattgatgaactcaaggatctcatggactgt
atgcccaagatcgaggacggggagccattcaacaagaatgagtttctacagcagcttgaa
gatcacggcaaagatctgggcaacttgaggagctttattttccggcgctgcgtggtgttg
ttccatggggtggacaccggtatcaatcgggtctctcggttgaagcactttgtcaagtat
ggtggaggaagtgtcactgaggacgcaggcgacttatctgtgacacatgttgtgatagaa
ggaggagatccaatgcaaatgggtgaggcggccgatatggtgcgtaaggagctgagctca
agacgcacacaacccagggtggtggctggaaaatggatcgaggattgctggaaggagggc
acattgcttgatgaggagcagtttgtggttccatga
DBGET
integrated database retrieval system
