Fusarium vanettenii: NECHADRAFT_65680
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Entry
NECHADRAFT_65680 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
nhe
Fusarium vanettenii
Pathway
nhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NECHADRAFT_65680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_65680
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NECHADRAFT_65680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADNP_N
Motif
Other DBs
NCBI-GeneID:
9664572
NCBI-ProteinID:
XP_003053622
JGI:
65680
UniProt:
C7YHF9
LinkDB
All DBs
Position
1
AA seq
1285 aa
AA seq
DB search
MDITEDTIPELQPIFSFLNSHSNKLYQEGYFLKLDDQNTRMLDLAHPLIPSPTEPLPPSP
LHLRRPIHTSSDEQPLQNILSISTAGRNRYLLHFNSRHSLLQWTAGIRLAIFEHSTMQEA
YTGALIAGKGKTLNNIGVIMERSRFKTEEWVRVRFGAGVPWRRCWCVITPPDEKEYAKLQ
KEMKKRSPYDRSQVPTLKGDIKFYDQRKDGKKQKKAQPIATITDAYSAYAIYPQAKSLIE
ASTLLKIEGNIAIHTDPPSSTEGFVFIMPETHPAVTGFEMLLRFLFPTWDTFGLYGRPGK
LVASVLDSRSLMFAMPKSSRYGYLENLDVSNLILEDGSSNWGERDWRKKLKEATGTRMNA
MDDAPTTRSRSNSRKSVRLSFGDGAKQRIGFQDQQGPTRSSRSFSLTERTRTDSAPADPS
RVAFGQGGHGRNSSDPNHLAGPPPPRHDFNGNSPYSGSPQRGPTPVGGQYQNQAPAELGS
GYENNRGASGSPPLRDLDGMRKMHTPEPVSRPPAFNHGPQARPMSKAYHSPELRRANSRL
SSSTLAQLATAGGLGGPNDSNPSPREGEVDAARSGPSVPQSHANSVGISANDNRSREALS
PPNQDPSSNNLPPPLNLQKQRSRSPLAQSPYGPPSPYARGPNSRPGTSDGKRSPMPPGMG
PPRSPHPQNPNRRPDMGPDGRRPSDPRRPGPGPDGRRPSDPRRPGPDGRRPSDPRGPGPD
GRRPSDPRARGNGPPPPGHGPPPPGPYGNFRPGPGRSPGPHGPPGPPGPHGPPMQMGHRK
PVPERAPTFEAPTFEEPKTSTMSTSSVVTANEIIDHYVFDQGRRPVGTPTSDRRPPPPQR
QGSNRSGQSSHYDDSSSMNSIDYASTHKSTETKKSVERPRAGVLKTVGGSDEPEMPRDAG
YDIPDINFGPTINYGATQQHNRTPGALTPGSDPAQRPYSPAGQAPTPPAHKSSGSHGSQG
SHGRKDSEDMKRMMAWQPGASAPPSGSQGLSAEQFVQQRAAHARSASSNTLSGGRPTTPG
GSMKRTSSYDMLQGLQGGSGRHSRNSSVDLLSRPGSRGANSALNFASPGDAPTHLSAREQ
EQVARLTGAPLISVPGHQRQGSQGSAMMGHQRQASSGSGLVAAIEAREREKQQMKQGMSS
QAVQHAINQRQQQQAAMAYQQQMAQQQMAQQQMMQQQMAQQQQMAQQQAAYQQQAYQQQQ
QQMGGAYSTMGRGGGGGQYGAGGMPYGAPQQQAGGYGQPASFSRPLRTPTQVDPRFVPPQ
GQYGPAPGSQQTPRNVHPQYQGQAF
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggatattacagaggacacgattccggagcttcagcccatcttttccttcctcaacagc
cactccaacaagctgtaccaggaaggctatttcctcaagctcgacgaccagaatacacgt
atgcttgatctcgcacaccctcttatcccctcccccacagagcccctaccgccaagcccc
ctccaccttaggcggcccattcacacatctagcgatgaacagcccctacagaacattctg
agcatctcaacagccggaagaaaccgctatcttcttcacttcaactcgcgccattcgctg
ctacaatggactgctggaatccggctcgccatttttgagcattccacgatgcaagaggcc
tacaccggtgccctcattgccggcaagggtaaaacactgaataacattggcgtcatcatg
gagaggtcgcggttcaagaccgaagaatgggttagggtccgcttcggtgccggtgttcct
tggaggagatgttggtgtgtcattacaccacccgacgagaaggagtacgcgaagctccag
aaggagatgaagaagaggtcgccatatgaccggtcccaagtccccactctaaagggagat
atcaagttttacgaccagcgcaaggacggcaagaagcaaaagaaagctcaaccgattgcc
acgatcacggacgcctactcggcatatgccatttatcctcaagccaagtcactgatcgag
gcttcgacgctgctcaagattgagggcaacatcgctatccataccgacccaccttcgtct
accgagggcttcgtcttcatcatgcccgagactcacccagccgtcactggcttcgagatg
ttgttgcggttcctcttccccacctgggatacctttggcctgtacggtcgcccaggaaag
ctcgttgccagcgtcctggactcccgatctctgatgtttgccatgcctaagagctcgcgt
tacggttatctcgaaaacctcgacgtctccaacctaattctcgaagatggtagctctaac
tggggcgagagagattggagaaagaagctcaaggaagcgactgggacaaggatgaatgct
atggatgatgctccgactactcgatcccgaagtaacagccgaaagagcgtcaggctgagc
tttggggacggtgcgaaacaaagaatcgggttccaagaccagcaaggtcctaccaggtct
tctcgttcattctctctgactgagcgtacgcgaaccgattctgcacctgccgatccatca
cgggtggcctttggtcaaggtggtcatggccgcaactcctctgaccccaaccatttggcc
ggtcctcctcctcctcgccatgatttcaatggcaacagcccctattctggttcgccccag
cgtggcccaacccctgtgggcggccagtatcaaaatcaggcgcctgctgagctcggcagt
ggttatgaaaacaaccgtggtgcttcaggctcgccccctttgagagatttggatggcatg
cgaaagatgcatactccggagcccgtttcacgacccccggcattcaaccatgggccccag
gcccggcccatgagcaaggcgtaccactctcctgagctcaggcgagctaacagcaggctt
tctagctccacgcttgcccagcttgctacagctggaggcttgggcggaccaaatgattcg
aatccttctcccagagaaggcgaggtggacgctgcgagatctggaccatcggtacctcaa
tcacacgccaactccgtagggatatctgctaacgacaaccgctcgcgtgaagctttaagt
ccgccaaaccaggatccctcctccaacaacctcccaccaccgctcaatcttcaaaaacaa
cgatctcgatcccccctagcccagtccccctacggacctccaagcccttatgcgcgtggg
ccgaactcccgacctggaacctcggacggtaagcggtctcccatgcccccaggtatgggc
cctccacgctcccctcatccgcaaaaccccaaccgtcgacccgacatggggcccgatgga
cggcgaccttcagaccctcgccgccctggccctggacctgatggacgacgaccttccgat
cctcgtcgtcccggacctgacggacggaggccttcggacccccgaggtcccggacccgat
ggccggagaccctcagatccccgggcccgtggcaacggacccccaccgccaggtcatggc
ccaccaccccctggaccttacggcaattttcggccaggccccggtcgatctcctggacct
catgggcccccaggaccccccgggccacatggacctcccatgcagatgggccatcgaaag
cctgtgcccgagagagcgccgacttttgaagcgccgacctttgaagaacccaagacgtca
accatgtcgaccagcagtgtcgtgacagccaacgaaatcatcgaccactatgtatttgac
caaggtcgccgacctgtgggaacgccgacctctgacagaaggccgcccccgcctcaacga
cagggcagcaacaggagtggccagagcagccattacgacgacagctcttctatgaacagc
atcgactatgccagcacccacaagtctactgaaaccaagaagtctgtagagcgacctcgc
gctggagttctcaagacagtcggtggcagtgacgagcctgaaatgccacgagacgccggt
tatgacatcccggacattaactttgggccgaccattaactacggtgccactcaacagcac
aacagaacacctggtgctctgactcctggatcagacccggctcaaagaccttattcccct
gcgggccaggcgcccacaccgccggcgcacaagtcatctggatcccatggatcccaggga
tctcatggacgcaaagattccgaagacatgaagcgaatgatggcatggcagccaggtgca
tcggcaccaccgtccggctcccaaggcctcagtgccgagcagtttgtacagcagagagcg
gcccatgctcgcagcgcctctagcaacacgctgagtggaggtcgacctacgacgcctggt
ggatcaatgaagcgtaccagttcttacgacatgcttcagggcctgcaaggtggctcaggt
cggcattcacgaaatagttcagttgacttgctgtcccgtcccgggtcacgcggcgcgaac
tcggctctcaactttgccagcccgggagatgcacccactcatctcagcgctcgcgagcag
gagcaggttgctcgtctgacgggagcgccattgatcagtgtgcccgggcatcaacggcag
gggtctcaaggctccgccatgatgggacatcaaagacaagcctcctctggttcggggttg
gtcgccgctatcgaagcccgagaacgtgagaagcagcagatgaagcagggcatgagcagc
caggcggtgcagcacgcgatcaatcagcgacagcaacaacaggctgccatggcataccaa
caacagatggcgcaacagcagatggcccagcagcaaatgatgcagcagcagatggcacag
cagcagcaaatggctcaacagcaagcagcataccagcaacaagcctatcagcagcagcaa
cagcaaatgggcggtgcatacagcaccatgggtcgaggaggcggaggcgggcagtatggc
gctgggggaatgccatatggcgcaccccagcagcaggcgggaggttacggacaaccagcc
agtttctcgcggccgctccggacaccaacgcaggttgacccccggttcgtgccaccacag
ggtcagtatggcccggcgcccggatctcaacagacgccgcgcaatgtccacccacagtac
caggggcaggcattttaa
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