Nitrosococcus halophilus: Nhal_0178
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Entry
Nhal_0178 CDS
T01198
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nhl
Nitrosococcus halophilus
Pathway
nhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nhal_0178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_0178
Enzymes [BR:
nhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nhal_0178
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nhal_0178
RecFOR pathway proteins
Nhal_0178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_22
AAA_14
AAA_16
AAA_18
Rad17
nSTAND3
TIP49
NTPase_1
DUF815
AAA_2
AAA_24
RNA_helicase
Bac_DnaA
AAA_17
NB-ARC
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADE13388
UniProt:
D5C4W5
LinkDB
All DBs
Position
190591..191637
Genome browser
AA seq
348 aa
AA seq
DB search
MTLSRGLVSPQGASDEAVVEPSLRPAKLADYVGQPQVQEQMEVFIPAARARGEALDHVLI
FGPPGLGKTTLSHIVANELGVNLRQTSGPVLERPGDLAALLTNLEPRDVLFIDEIHRLSP
VVEEVLYPAMEDRQIDIMIGEGPAARSIKLDLVPFTLVGATTRAGLLTSPLRDRFGIVQR
LEFYDVEHLVLIVERTARILGMVMEAGGALEVARRSRGTPRIANRLLRRVRDYAEVKGDG
RVTHEVAKKALDLLDVDSNGFDTMDRKLLLAMIEKFDGGPVGVDSLAAAISEERGTIEDV
IEPFLIQQGFVMRTPRGRMATRHTYLHFGLEPAAEAVQQETPDLFFNE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgactctaagtcggggcttggtttccccccaaggggccagtgatgaagccgtcgttgaa
ccttccctgcgccctgccaaattggctgattatgtgggacaacctcaggtgcaggagcag
atggaagtttttattcccgccgctcgggctcggggagaggctcttgatcatgtgctcatt
tttgggcctccaggattgggtaagaccaccctttcccatatcgttgccaatgaattgggg
gtcaatctgcgccagacctccgggccggtattggagcgtcctggcgacttggctgctctg
ctaactaacctagagccacgggatgtgctttttatcgatgaaattcatcgcttgagcccc
gtggtggaagaagtgctctatcctgccatggaagatcgccagatcgatattatgattggt
gaaggtccggcggcacgctccattaaattggatttggtgcccttcaccttggtgggggcc
accacccgggctggattgctgacctctcctttacgggatcgctttggtatcgtccaacgc
ctggaattctatgacgtcgagcatttggtcttgattgtggaacgtacggcccgtattctt
ggcatggtcatggaagcagggggcgcgttggaagtggcccgccgctctcgggggacacca
cggattgccaaccgcctgctgcggcgggtgcgggattacgccgaggtgaagggagacggc
cgggttacccatgaggtggcgaaaaaagccttggacctgctagatgtggatagcaacggt
tttgataccatggaccgcaagctgctgctagcgatgattgaaaaatttgatggcgggccg
gtgggggtcgatagtttggccgctgccattagtgaagagcggggcactatcgaagatgtg
atagagccatttttaatccaacagggatttgtgatgcgtacgccgcgaggccgaatggcg
acccgtcatacctatcttcattttggtttggagccggctgcggaggcagtacagcaagaa
accccagatcttttcttcaatgaatga
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