Nitrosococcus halophilus: Nhal_3812
Help
Entry
Nhal_3812 CDS
T01198
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nhl
Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:
nhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nhl03032
]
Nhal_3812
03400 DNA repair and recombination proteins [BR:
nhl03400
]
Nhal_3812
Enzymes [BR:
nhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Nhal_3812
DNA replication proteins [BR:
nhl03032
]
Prokaryotic type
DNA Topoisomerases
Nhal_3812
DNA repair and recombination proteins [BR:
nhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Nhal_3812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ADE16827
UniProt:
D5C3C0
LinkDB
All DBs
Position
complement(3926322..3928676)
Genome browser
AA seq
784 aa
AA seq
DB search
MSKNLVVVESPAKAKTIKKYLGKDFEVMASYGHVRDLMPKEGAVDPEHGFAMKYQVIEKN
SRHVDAIAKALKKADALLLATDPDREGEAISWHLLELLKERGALEGKSIKRVVFYEITQQ
AVNEAIAHPRDISSDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
EREKEIEAFKIQEYWTLEADAAASKHPFVAKLTHLDGHKLGQFDIDNGDRAQALVEQLTK
AASGELLVIKVERKQRRRNPAAPFITSTLQQEASRKLGFSTKRTMSVAQQLYEGVDIGDG
AVGLITYMRTDSVNLANEAVKELRDFIAGHFGEKSLPAKPKTFKTRAKNAQEAHEAIRPT
SVYRTPEELKPHLKPEQFKLYQLIWRRTIACQMNHATIETVAVDLDTRKSVPEKGVSNTG
SNIFRATGSTVVDPGFMAVYQEGRDDTKAEEEQRILPPMKEGDRVELVRIRPEQHFTEPP
PRYTEASLVRALEEFGIGRPSTYATIISTLQQRSYALLENKRFHPTDVGRVVNRFLTEHF
NPYVDYDFTARLEDQLDAISRGEKVWIPVLEEFWEPFLGRIQEKEQSVSREEAVQARELG
IDPKSGRPVSVRIGRYGPYVQIGSKEDEEKPRFAGLRPGQKMDTITLEEGLALFELPREL
GFSPEGEKVSVNIGRFGPYVKYDNKYVSLRGEDPYTIALERALELIQEKKQADANRVIKV
FPDSGIQILNGRYGPYVTDGERNARVPKDQAPEKLSLEQAQTLINEAPAKRARRKTGTRK
KAKG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaacctggttgttgtggagtcgccagccaaggccaagactattaagaagtac
ttagggaaagactttgaagtgatggcgtcctatgggcacgtgcgagacttgatgcccaag
gagggtgcggtggaccctgagcatgggttcgcaatgaagtaccaggtcattgaaaagaat
agccgccatgtggatgccatcgcaaaagcattgaagaaggccgatgccctccttctcgca
actgatcccgatcgggaaggggaggcgatttcctggcatcttcttgagcttcttaaagag
cggggagctttggagggtaagtccatcaagcgggtggtgttctatgaaattacccagcag
gcagtcaatgaggccatcgcccaccctcgcgatatttcctcggatttagtcaatgcccag
caagcacggcgtgccttggactatttagtgggatttaatctttctccactgctgtggaaa
aagatccgccgcggcttgtctgcgggacgggtccaaagtccggcactgcgcttgatctgc
gagcgggaaaaagagatcgaagcctttaagatccaggaatattggaccctagaggccgat
gcggcggcgtctaagcacccctttgttgccaaactaacccatttggacggtcacaaattg
gggcaattcgatattgataacggtgaccgggcccaggcgcttgtggagcagctgactaaa
gcggcgagcggtgaattgctggtaattaaggtggagcgcaagcagcgccgccgtaatcca
gcggctccatttattacttccacgttacaacaggaggcttcccgcaagctcggtttttcc
actaaacggaccatgagcgtggcccagcaactctatgaaggggtggatattggagatggc
gccgtgggtctcattacctatatgcggaccgattcggtcaatttggccaatgaagccgtg
aaggaacttcgtgattttattgccggccattttggtgaaaagagtttgccggccaagccg
aagacattcaaaacccgggctaaaaacgcccaagaggcccatgaagccattcgcccgacc
tcggtataccgaactccagaggagttaaaacctcacctcaagcctgaacagttcaagctc
tatcagcttatttggcgtcgcaccatcgcctgccagatgaaccatgccaccattgagact
gtggcggtggatctagatactcggaagtcggttccagagaagggagtgagcaatactggc
agcaatattttccgggccacagggtcaacggtggttgaccccggttttatggctgtgtat
caggagggacgggatgataccaaagcggaggaggaacaacggatactgccgcccatgaag
gagggggatcgagtggagttggtgcggatacggccggagcaacacttcacggagccgccg
ccacgctataccgaagccagcttggtgcgggctttagaggaatttggtatcgggcggcct
tctacttacgcgacgattatctccaccctccagcagcgcagttatgcgttgttggaaaac
aagcgcttccaccccacggatgtggggcgggtagtcaaccgctttctgacagagcatttt
aacccttatgtggattacgatttcaccgctcgtctggaggatcagcttgatgccatttcc
cgcggagagaaggtctggattccggtgttggaggaattttgggaaccctttttggggcgc
atacaagaaaaggaacaaagcgtcagccgagaagaggcggtccaagcccgggaattgggt
attgatcccaaaagcggtcgcccagtatcagtgcgcatcggacgttatgggccctatgtc
cagattggctctaaggaggatgaagaaaagccccgttttgcggggctgcggccaggccaa
aaaatggataccattaccctggaagaagggctggctttgtttgaattaccccgagagttg
gggtttagtcctgagggggagaaggtcagtgtcaacattgggcgttttggaccttatgtg
aaatatgataataaatatgtctctctacggggggaggacccctataccattgctctggag
cgggccttagagcttatccaggagaagaagcaggctgatgctaatcgggtaatcaaggtc
tttcctgatagcggaatccagattctcaatgggcgttacgggccctatgtgacggatggt
gaacgcaatgcccgggttcccaaggaccaagcccccgagaagcttagcttggagcaggcg
caaacccttattaacgaagcccccgcaaagcgggcgcgccgtaaaaccggaacccgaaaa
aaggctaaggggtaa
DBGET
integrated database retrieval system
