Nitrincola iocasae: F5I99_09385
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Entry
F5I99_09385 CDS
T06212
Name
(GenBank) ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
nik
Nitrincola iocasae
Pathway
nik00630
Glyoxylate and dicarboxylate metabolism
nik01100
Metabolic pathways
nik01110
Biosynthesis of secondary metabolites
nik01120
Microbial metabolism in diverse environments
nik01200
Carbon metabolism
Module
nik_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F5I99_09385
Enzymes [BR:
nik01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
F5I99_09385
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QEW06697
UniProt:
A0A5J6LDS5
LinkDB
All DBs
Position
complement(2002885..2004264)
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AA seq
459 aa
AA seq
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MDQSKRYARLDLLEDELMKGGKHVLAAYKMKPKTGYGYLESAAHFAAESSTGTNVEISTT
DDFTRGVDALVYHIDEATEDMRIAYPIDLFDRNMLDGKTMLVSFLTLAIGNNQGMGDIEY
AKMIDFYVPPEMLDLYDGPQVNIEDLWRILGRPEKDGGYIAGTIIKPKLGLRPEPFAKAA
YQFWLGGDFIKNDEPQGNQVFAPMKQVIPLVVDAMRRAMDETGQAKIFSANITADWHDEM
IARGEFILDAFGTDADKVAFLVDGYVGGPGMVTTARRYFPNQFLHYHRAGHGAVTSPSAK
RGYSAYVLAKMSRLQGASGIHVGTMGYGKMEGEKDDRAIAYIIERDSFQGPVYFQDWNGM
KATTPIISGGMNALRLPGFFENLGHGNVINTAGGGAYGHIDSPAAGALSLRQAYECWKAG
ADPIEWAKEHPEFARAFESFPNDADAIFPGWRDKISSHR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcaaaacgctatgcccgcttggacctgcttgaagacgaattgatgaagggt
ggcaagcatgtacttgccgcctacaaaatgaagcccaaaactggttatggctatcttgaa
tctgctgctcactttgcggctgagtcttccacaggcaccaacgtagaaatcagtaccacc
gatgatttcacccgaggcgtggatgcattggtttatcacatagatgaagccacagaggat
atgcgtattgcctatcccatcgatttgtttgaccgcaatatgctggatggaaaaaccatg
ctggtgtctttcctgacactggccataggcaacaaccagggcatgggtgacatagaatat
gccaagatgatcgatttttatgtaccccccgagatgttggatctgtatgacggtccgcag
gtcaatatagaagacttgtggcgcatcctgggacggccggaaaaagatggcggttatatc
gccggtacgattatcaagcctaaattgggcttacgacccgaaccctttgccaaagccgcc
tatcaattctggttgggtggggatttcatcaaaaacgatgagccacaaggcaatcaggtt
tttgcgccgatgaagcaggtgattccgctggtggtggatgccatgcgccgggcgatggat
gaaaccggtcaggccaaaatattctcggccaacattaccgctgactggcatgatgaaatg
atcgcccgaggtgagtttatcctggacgcctttggtaccgatgccgataaagtcgccttt
ctggtagatggttatgtcggtggtcctggtatggtcaccacagctcgacgctattttccc
aatcagtttctgcactaccatcgtgccggtcatggtgcggtaacttccccgtcggctaag
cgcggttacagtgcctatgtgctggcgaaaatgtcccgtttacaaggggcctcgggtatc
catgttggtaccatgggctatggcaagatggaaggcgaaaaggatgatcgtgctatcgcc
tatatcatcgaacgtgacagctttcagggcccggtctatttccaggactggaatggaatg
aaggctaccacaccgattatttccggtggtatgaatgcgctgcgcttacccggatttttt
gaaaatctcgggcatggcaatgttattaataccgcaggcggtggtgcttacggccatatt
gacagcccggcggctggagcgctgtccttgcgtcaagcctatgaatgttggaaagccggt
gcggaccccatcgaatgggccaaagaacatcctgagtttgcgcgggcctttgagtccttc
ccgaacgatgccgatgcgatattccctggctggcgcgacaaaatcagctctcaccgttaa
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